BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0704300 Os02g0704300|AK058932
(331 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0704300 Conserved hypothetical protein 676 0.0
Os09g0130800 DEAD/DEAH box helicase, N-terminal domain cont... 540 e-154
Os03g0586900 Putative DNA helicase family protein 246 2e-65
Os07g0495900 Similar to Regulator of nonsense transcripts 1... 166 2e-41
Os04g0424200 Conserved hypothetical protein 129 3e-30
Os06g0310200 Conserved hypothetical protein 129 4e-30
Os03g0440200 Conserved hypothetical protein 124 8e-29
Os04g0582000 Conserved hypothetical protein 111 6e-25
Os04g0588200 Conserved hypothetical protein 109 2e-24
Os03g0160400 Similar to ACL098Cp 107 8e-24
AK110123 106 2e-23
Os02g0684150 104 8e-23
Os04g0599600 102 4e-22
Os10g0537600 Conserved hypothetical protein 100 2e-21
>Os02g0704300 Conserved hypothetical protein
Length = 331
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/331 (100%), Positives = 331/331 (100%)
Query: 1 MIREALSEAQVVLSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQGKRCILAG 60
MIREALSEAQVVLSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQGKRCILAG
Sbjct: 1 MIREALSEAQVVLSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQGKRCILAG 60
Query: 61 DHCQLAPVILSRKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHG 120
DHCQLAPVILSRKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHG
Sbjct: 61 DHCQLAPVILSRKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHG 120
Query: 121 LLKSSHSVASQTLADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQIDLSGTGSFYND 180
LLKSSHSVASQTLADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQIDLSGTGSFYND
Sbjct: 121 LLKSSHSVASQTLADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQIDLSGTGSFYND 180
Query: 181 GEADIVTQHVLNLVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPGLSGVEVSTIDSFQGR 240
GEADIVTQHVLNLVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPGLSGVEVSTIDSFQGR
Sbjct: 181 GEADIVTQHVLNLVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPGLSGVEVSTIDSFQGR 240
Query: 241 EADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLARLLRHI 300
EADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLARLLRHI
Sbjct: 241 EADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLARLLRHI 300
Query: 301 RRYGQVKHVVPGSLDGVSGLGFSQPTLPSIS 331
RRYGQVKHVVPGSLDGVSGLGFSQPTLPSIS
Sbjct: 301 RRYGQVKHVVPGSLDGVSGLGFSQPTLPSIS 331
>Os09g0130800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 981
Score = 540 bits (1392), Expect = e-154, Method: Compositional matrix adjust.
Identities = 261/331 (78%), Positives = 289/331 (87%)
Query: 1 MIREALSEAQVVLSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQGKRCILAG 60
+IRE LS A VVLSTN GAADPL+RR CFDLVIIDEAGQAIEPSCWIPILQGKRCILAG
Sbjct: 651 IIREVLSNADVVLSTNIGAADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQGKRCILAG 710
Query: 61 DHCQLAPVILSRKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHG 120
D QLAPV+LSR+A+ GGL SLLERASSLHN LLTT+LT Q+RM+DSIASWAS EMY G
Sbjct: 711 DQRQLAPVVLSREAMQGGLAMSLLERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDG 770
Query: 121 LLKSSHSVASQTLADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQIDLSGTGSFYND 180
LKSS SVAS LAD P +K TWITRC LLLDTRMPYG+L+ C E +D +GTGSFYN+
Sbjct: 771 FLKSSPSVASHLLADYPFIKETWITRCAFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNN 830
Query: 181 GEADIVTQHVLNLVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPGLSGVEVSTIDSFQGR 240
GEAD+V+QHVLNLV CGVSPTAIAVQSPYIAQVQLLR+RLE+YP SGVEVSTIDSFQGR
Sbjct: 831 GEADVVSQHVLNLVQCGVSPTAIAVQSPYIAQVQLLRDRLEDYPEASGVEVSTIDSFQGR 890
Query: 241 EADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLARLLRHI 300
EADAVVISMVRSN LGAVGFLGD+RRMNVAITRA RHV +VCD+STIC++ FLARLLRHI
Sbjct: 891 EADAVVISMVRSNTLGAVGFLGDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHI 950
Query: 301 RRYGQVKHVVPGSLDGVSGLGFSQPTLPSIS 331
R++GQV+HV PGS G SGLG++ P LPSIS
Sbjct: 951 RQHGQVRHVEPGSFGGDSGLGYTPPALPSIS 981
>Os03g0586900 Putative DNA helicase family protein
Length = 651
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 183/304 (60%), Gaps = 9/304 (2%)
Query: 2 IREALSEAQVVLSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQGKRCILAGD 61
+ + + A VVLST TGA+ + FDLVIIDEA QA+E +CWI +L+G RC+LAGD
Sbjct: 348 VADVIKNADVVLSTLTGASSKKLD-GITFDLVIIDEAAQALEMACWIALLKGPRCVLAGD 406
Query: 62 HCQLAPVILSRKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHGL 121
H QL P I S +A G+GK+L ER + + +T+ LT+Q+RM++ I +W+SKE+Y+
Sbjct: 407 HLQLPPTIQSAEAEKKGMGKTLFERLTEAYGDQITSMLTIQYRMHELIMNWSSKELYNNK 466
Query: 122 LKSSHSVASQTLADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQIDLSGTGSFYNDG 181
+K+ SVA L D VK + T ++L+DT TGC + S N+G
Sbjct: 467 IKAHSSVADHMLYDIEEVKRSSSTEPTIILIDT--------TGCDMEEVKDEEESTMNEG 518
Query: 182 EADIVTQHVLNLVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPGLSGVEVSTIDSFQGRE 241
EA + H LV GV + I + +PY AQV L+ + L +E+ST+D FQGRE
Sbjct: 519 EAAVSIAHAKLLVESGVRASDIGIITPYAAQVTCLKMMRNKDTKLKDLEISTVDGFQGRE 578
Query: 242 ADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLARLLRHIR 301
+A++ISMVRSN VGFL D RRMNVA+TRA R +VCD T+ + FL RL+ +
Sbjct: 579 KEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRARRQCCLVCDVETVSNDKFLKRLVEYFE 638
Query: 302 RYGQ 305
G+
Sbjct: 639 ENGE 642
>Os07g0495900 Similar to Regulator of nonsense transcripts 1 homolog
Length = 1013
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 158/307 (51%), Gaps = 21/307 (6%)
Query: 3 REALSEAQVVLSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQG-KRCILAGD 61
RE L A V+ T GA DP + F V+IDE+ QA EP C IP++ G K+ +L GD
Sbjct: 384 REILQSADVICCTCVGAGDPRLA-NFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGD 442
Query: 62 HCQLAPVILSRKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHGL 121
HCQL PVI+ +KA GL +SL ER L G+ RL VQ+RM+ ++ + S Y G
Sbjct: 443 HCQLGPVIMCKKAARAGLAQSLFERLVIL--GVKPFRLQVQYRMHPCLSDFPSNCFYEGT 500
Query: 122 LKSSHSVASQTLADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQIDLSGTGSFYNDG 181
L++ +V + +P + W + +M E+I SGT S+ N
Sbjct: 501 LQNGVTVNER---QTPGIDFPWPVPNRPMFFYVQM--------GQEEISASGT-SYLNRT 548
Query: 182 EADIVTQHVLNLVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPGL-----SGVEVSTIDS 236
EA V + V + GV P+ I V +PY Q + + L +EV+++DS
Sbjct: 549 EAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDS 608
Query: 237 FQGREADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLARL 296
FQGRE D +++S VRSN +GFL D RR+NVA+TRA + ++ + + L
Sbjct: 609 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSL 668
Query: 297 LRHIRRY 303
L H + +
Sbjct: 669 LTHYKEH 675
>Os04g0424200 Conserved hypothetical protein
Length = 836
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 146/314 (46%), Gaps = 51/314 (16%)
Query: 6 LSEAQVVLSTNTGAADPLIRRTC-CFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDHCQ 64
L EA +V ST + + + R FD+VIIDEA QA+ GD Q
Sbjct: 465 LDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAV-----------------GDPVQ 507
Query: 65 LAPVILSRKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKS 124
L ++S A G G SL +R + G L +Q+RM+ I+ + SKE Y G+L+
Sbjct: 508 LPATVISSTAQKLGYGTSLFKRFQAA--GFPVQMLKIQYRMHPEISIFPSKEFYEGVLED 565
Query: 125 SHSVASQTLADSPVVKATWITRC---PLLLLDTRMPYGALDTGCGEQIDLSGTGSFYNDG 181
++ K W + P D G + SG+GS+ N+
Sbjct: 566 GEGLSK---------KRPWHSYSCFGPFCFFDVD----------GTESQPSGSGSWVNED 606
Query: 182 EADIVT--QHVLNLVHCGV-SPTAIAVQSPYIAQVQLLRERLEEYPGLSG---VEVSTID 235
E + +T H + + + + S + +AV SPY QV+LL++ G ++V+T+D
Sbjct: 607 EVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVD 666
Query: 236 SFQGREADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLAR 295
FQGRE + V+ S VR N +GF+ D RRMNVAITRA V VV ST+
Sbjct: 667 GFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHWNN 726
Query: 296 LLRHIR---RYGQV 306
L+ + RY QV
Sbjct: 727 LVESAKERGRYFQV 740
>Os06g0310200 Conserved hypothetical protein
Length = 1029
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 146/314 (46%), Gaps = 51/314 (16%)
Query: 6 LSEAQVVLSTNTGAADPLIRRTC-CFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDHCQ 64
L EA +V ST + + + R FD+VIIDEA QA+ GD Q
Sbjct: 495 LDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAV-----------------GDPVQ 537
Query: 65 LAPVILSRKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKS 124
L ++S A G G SL +R + G L +Q+RM+ I+ + SKE Y G+L+
Sbjct: 538 LPATVISSTAQKLGYGTSLFKRFQAA--GFPVQMLKIQYRMHPEISIFPSKEFYEGVLED 595
Query: 125 SHSVASQTLADSPVVKATWITRC---PLLLLDTRMPYGALDTGCGEQIDLSGTGSFYNDG 181
++ K W + P D G + SG+GS+ N+
Sbjct: 596 GEGLSK---------KRPWHSYSCFGPFCFFDVD----------GTESQPSGSGSWVNED 636
Query: 182 EADIVT--QHVLNLVHCGV-SPTAIAVQSPYIAQVQLLRERLEEYPGLSG---VEVSTID 235
E + +T H + + + + S + +AV SPY QV+LL++ G ++V+T+D
Sbjct: 637 EVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVD 696
Query: 236 SFQGREADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLAR 295
FQGRE + V+ S VR N +GF+ D RRMNVAITRA V VV ST+
Sbjct: 697 GFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHWNN 756
Query: 296 LLRHIR---RYGQV 306
L+ + RY QV
Sbjct: 757 LVESAKERGRYFQV 770
>Os03g0440200 Conserved hypothetical protein
Length = 824
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 145/314 (46%), Gaps = 51/314 (16%)
Query: 6 LSEAQVVLSTNTGAADPLIRRTC-CFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDHCQ 64
L EA +V ST + + + R FD+VIIDEA QA+ GD Q
Sbjct: 465 LDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAV-----------------GDPVQ 507
Query: 65 LAPVILSRKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKS 124
L ++S A G G SL +R + G L +Q+RM+ I+ + SKE Y G+L+
Sbjct: 508 LPATVISSTAQKLGYGTSLFKRFQAA--GFPVQMLKIQYRMHPEISIFPSKEFYEGVLED 565
Query: 125 SHSVASQTLADSPVVKATWITRC---PLLLLDTRMPYGALDTGCGEQIDLSGTGSFYNDG 181
++ K W + P D G + SG+GS+ N+
Sbjct: 566 GEGLSK---------KRPWHSYSCFGPFCFFDVD----------GTESQPSGSGSWVNED 606
Query: 182 EADIVT--QHVLNLVHCGV-SPTAIAVQSPYIAQVQLLRERLEEYPGLSG---VEVSTID 235
E + +T H + + + + S + +AV SPY QV+LL++ G ++V+T+D
Sbjct: 607 EVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVD 666
Query: 236 SFQGREADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLAR 295
FQG E + V+ S VR N +GF+ D RRMNVAITRA V VV ST+
Sbjct: 667 GFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHWNN 726
Query: 296 LLRHIR---RYGQV 306
L+ + RY QV
Sbjct: 727 LVESAKERGRYFQV 740
>Os04g0582000 Conserved hypothetical protein
Length = 813
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 28/272 (10%)
Query: 30 FDLVIIDEAGQAIEPSCWIPI-LQG-KRCILAGDHCQLAPVILSRKALDGGLGKSLLERA 87
+L+++DEA Q E IP+ L G K+ + GD CQL ++ S+ + + G+S+ ER
Sbjct: 494 LELLVVDEAAQLKECETLIPMQLPGIKQAVFIGDECQLPALVKSKISDNADFGRSVFERL 553
Query: 88 SSLHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKSSHSVASQTLADSPVVKATWITRC 147
SSL G L +Q+RM I+ + Y G + +V S+ +
Sbjct: 554 SSL--GYNKHLLNIQYRMRPEISKFPVASFYDGKISDGPNVVSKNYKRN----------- 600
Query: 148 PLLLLDTRM--PYGALDTGCGEQIDLSGTGSFYNDGEADIVTQHVLNLVHCGV---SPTA 202
+L +M PY ++ G + S N E V V L V S
Sbjct: 601 ---ILPGKMFGPYSFINVDGGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGSKLT 657
Query: 203 IAVQSPYIAQVQLLRERL----EEYPGLSGVEVSTIDSFQGREADAVVISMVRSNPLGAV 258
+ V SPY AQV+ ++E++ + Y S V+V ++D FQG E D ++IS VRSN G+V
Sbjct: 658 VGVVSPYNAQVRAIQEKIGKTYDMYDDFS-VKVKSVDGFQGAEEDVIIISTVRSNRAGSV 716
Query: 259 GFLGDSRRMNVAITRACRHVTVVCDTSTICHS 290
GFL + +R N+A+TRA + +V + +T+ +S
Sbjct: 717 GFLTNLQRTNMALTRAKHCLWIVGNGTTLSNS 748
>Os04g0588200 Conserved hypothetical protein
Length = 1287
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 153/314 (48%), Gaps = 23/314 (7%)
Query: 2 IREALSEAQVVLSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQGKRCILAGD 61
++ + + QVV T G PL+ FD I+DEAGQ P P++ + +L GD
Sbjct: 967 VKARMEQVQVVGVTCLGIYHPLLAHKK-FDTCIMDEAGQITLPVSLGPLMLATKFVLVGD 1025
Query: 62 HCQLAPVILSRKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHGL 121
H QL P++ S +A + G+G SL R S H ++ L Q+RM+ I ++ +Y
Sbjct: 1026 HYQLPPLVQSSEARENGMGVSLFWRLSEAHPQAISA-LRCQYRMSSGIMELSNSLIYGNR 1084
Query: 122 LKSSHSVASQTLADSPVVKATWITRCP--LLLLDTRMPYGALDTGCGEQI---DLSGTGS 176
L S S +A++ K R P L L + P A+ +++ + +
Sbjct: 1085 L----SCGSLEIANA---KLKLSGRGPVRLKLKEILNPDRAVVFANTDEVPAFEAKEHRT 1137
Query: 177 FYNDGEADIVTQHVLNLVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPGLSGVEVSTIDS 236
N EA IV+ L+ GV+ + + +PY AQ L+++ ++ + VEV TID
Sbjct: 1138 VNNPTEALIVSWITNELLKRGVAQDGVGIITPYNAQANLIQQHVD-----ASVEVHTIDK 1192
Query: 237 FQGREADAVVISMVRSN---PLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFL 293
+QGR+ + +++S VRSN LGD R+NV +TRA + + +V +T+ L
Sbjct: 1193 YQGRDKECIIVSFVRSNGNTRASGSSLLGDWHRINVVLTRAKKKLIMVGSAATLSTIPLL 1252
Query: 294 ARLLRHI-RRYGQV 306
++ + R GQ+
Sbjct: 1253 RLMIEKVAERGGQL 1266
>Os03g0160400 Similar to ACL098Cp
Length = 959
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 161/344 (46%), Gaps = 38/344 (11%)
Query: 4 EALSEAQVVLSTNTGAA---DPLIRRTCCFDLVIIDEAGQAIEPSCWIPI--LQGKRCI- 57
+AL ++V+ST ++ IRR F + +DEAGQA EP +P+ L G+ +
Sbjct: 508 QALLRYKIVISTYMSSSMLQSEGIRRGH-FTHIFLDEAGQASEPEAMVPLSGLCGRDTVV 566
Query: 58 -LAGDHCQLAPVILSRKALDGGLGKSLLER------ASSLHNGLLTTRLTVQHRMNDSIA 110
LAGD QL PV+ ++A GLGKS L+R S + T+L +R + +I
Sbjct: 567 VLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFEYEQYSTGDPNYVTKLVRNYRCHPAIL 626
Query: 111 SWASKEMYHGLLKSSHSVASQTLADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQID 170
S+ Y G L + ++ DS + P+L + + GC E+
Sbjct: 627 ELPSELFYGGELIACKEDEVSSIYDSIDLPNKSF---PVLFVGIQ--------GCDER-- 673
Query: 171 LSGTGSFYNDGEADIVTQHVLNLVHCG-VSPTAIAVQSPYIAQVQLLRERLEEYPGLSGV 229
S++N EA V + NL G V I V +PY QV +++ LE + + +
Sbjct: 674 EGNNPSWFNRIEASKVVNIIRNLTRGGDVREADIGVITPYRQQVVKIKKALETF-EMPDL 732
Query: 230 EVSTIDSFQGREADAVVISMVRS-------NPLGAVGFLGDSRRMNVAITRACRHVTVVC 282
+V +++ FQG+E + ++IS VRS + +GFL + RR NVAITRA + ++
Sbjct: 733 KVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLSNHRRFNVAITRAKSLLIIIG 792
Query: 283 DTSTICHSTFLARLLRHIRRYGQVK--HVVPGSLDGVSGLGFSQ 324
+ I RLLR+ G + + P VSG SQ
Sbjct: 793 NPHIITKDRHWDRLLRYCADNGSYQGCPLPPPEETQVSGFRDSQ 836
>AK110123
Length = 1098
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 144/317 (45%), Gaps = 46/317 (14%)
Query: 4 EALSEAQVVLSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQGKRCI-LAGDH 62
E L+ A V+ + A P + +V DEA A EP +P+++G R + + GDH
Sbjct: 723 EILNGADVICGSAIAAGSPELD-MIDLPVVFFDEASMATEPVSLVPLMKGCRHLSIIGDH 781
Query: 63 CQLAPVILSRKALDGGLGKSLLER--ASSLHNG--LLTTRLTVQHRMNDSIASWASKEMY 118
QL PV+ S +A GGL KSL ER S+ +G + +T L VQ RM+ +A + +K Y
Sbjct: 782 KQLPPVVTSAEAKQGGLSKSLFERLIESTAADGSKIPSTMLNVQFRMHPRLAEFPNKTFY 841
Query: 119 HGLLKSSHSVASQTLADSPVVKATWITRCP-------LLLLDTRMPYGALDTGCGEQIDL 171
G L++ P V++ + + L +D + G +
Sbjct: 842 SGALENGSGTDK-----IPAVESGYWPQVEGKDEAHRLCFIDHK----------GRESKA 886
Query: 172 SGTGSFYNDGEADIVTQHVLNLVHCGVSPTA--IAVQSPYIAQVQLLRERLEEYPG---- 225
+ S N EA + ++++ T I + +PY Q LL + L
Sbjct: 887 DNSLSLCNVAEARLAVDVAMDVLRRNPDLTGDDIGIVTPYAGQQILLEKMLHNDTSAERR 946
Query: 226 ------------LSGVEVSTIDSFQGREADAVVISMVRSNPLGAVGFLGDSRRMNVAITR 273
L ++V T+D F+GRE ++ S VR+N G VGFL D RR+NVA+TR
Sbjct: 947 RAAGALGARSSQLGCIDVHTVDGFEGREKKVILFSTVRTNAQGYVGFLADGRRLNVALTR 1006
Query: 274 ACRHVTVVCDTSTICHS 290
A + V+ + T ++
Sbjct: 1007 AQSALFVLGNIDTFKNA 1023
>Os02g0684150
Length = 375
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 126/277 (45%), Gaps = 47/277 (16%)
Query: 30 FDLVIIDEAGQAIEPSCWIPI-LQGKR-CILAGDHCQLAPVILSRKALDGGLGKSLLERA 87
FDL+++DEA Q E IP+ L G R +L G QL ++ SR D G+SL ER
Sbjct: 113 FDLLVVDEAAQLKECESLIPLQLPGVRHAVLIGYEFQLPALVKSRVCEDAEFGRSLFERL 172
Query: 88 SSLHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKSSHSVASQTLADSPVVKATWITRC 147
SSL G L VQ+RM+ I+ + Y + +V + P+ + +
Sbjct: 173 SSL--GHPKHLLDVQYRMHPGISKFPVSSFYENKISDGENVLHRDYERKPLAGPMYGS-- 228
Query: 148 PLLLLDTRMPYGALDTGCGEQIDLSGTGSFYNDGEADIVTQ---------HVLNLVHCGV 198
Y ++ G++ S N E VT+ H + +H G+
Sbjct: 229 ----------YSFINVDAGKESKGKHDKSLMNPIEVAAVTRIVQRLFKGTHCIMPLHSGM 278
Query: 199 SPTA-----------------IAVQSPYIAQVQLLRERL----EEYPGLSGVEVSTIDSF 237
+ + + V SPY QV+ ++ERL E + G + V+V ++D F
Sbjct: 279 ASLSSDSLVCAESVDTGRKLCVGVVSPYKGQVRAIQERLGKAYETHGGFT-VKVRSVDGF 337
Query: 238 QGREADAVVISMVRSNPLGAVGFLGDSRRMNVAITRA 274
QG E D ++ S VRSN G+VGFL + R NVA+TRA
Sbjct: 338 QGAEEDIIIFSAVRSNTTGSVGFLSNVNRTNVALTRA 374
>Os04g0599600
Length = 923
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 32/273 (11%)
Query: 31 DLVIIDEAGQAIEPSCWIPILQG--KRCILAGDHCQLAPVILSRKALDGGLGKSLLERAS 88
D++I+DEA Q E IP+ K +L GD CQL P++ S+ + G G SL ER
Sbjct: 554 DVLIVDEAAQVRECELIIPLRLHWLKHVVLVGDDCQLRPMVKSQVCKEAGFGISLFERLV 613
Query: 89 SLHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKSSHSVASQTLADSPVVKATWITRCP 148
L L +Q+RM+ I+ + + + Y + + D P V ++ +
Sbjct: 614 VL--DFEKHLLNIQYRMDPRISLFPNVQFY-----------GRKILDGPNVMSSVYNKDY 660
Query: 149 LLLLDTRMPYGA---LDTGCGEQIDLSGTGSFYNDGEADIVTQHVLNLVHCGVSPT---- 201
T +P+G ++ G + + GTG+ + + V H++ +
Sbjct: 661 -----TNLPFGTYAFINISDGRE-EKEGTGNSWRNLVEVAVVLHLIQTIFKTWKRKGQML 714
Query: 202 AIAVQSPYIAQVQLLRERLEE-YPGLSG--VEVSTIDSFQGREADAVVISMVRSNPLGAV 258
+I V SPY +QV + RL + Y G V V ++D FQG E D +++S VRSN G V
Sbjct: 715 SIGVISPYSSQVDSIESRLGKLYDTCDGFHVRVKSVDGFQGEEDDIIILSTVRSNVKGIV 774
Query: 259 GFLGDSRRMNVAITRACRHVTVVCDTSTICHST 291
GFL D +R NVA+TRA RH + + +S+
Sbjct: 775 GFLADEQRTNVALTRA-RHCLWILGNANTLYSS 806
>Os10g0537600 Conserved hypothetical protein
Length = 985
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 139/287 (48%), Gaps = 33/287 (11%)
Query: 32 LVIIDEAGQAIEPSCWIPILQG--KRCILAGDHCQLAPVILSRKALDGGLGKSLLERASS 89
+++IDEA Q E +P+L + +L GD QL+ ++ S+ A D G+SL ER +
Sbjct: 235 ILVIDEAAQLKECEALVPLLLPGIEHILLIGDENQLSSLVKSKIAKDADFGRSLYERLCT 294
Query: 90 LHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKSSHSVASQTLADS----PVVKATWIT 145
+ G L VQ+RM+ I + + Y + SV + S P+ A
Sbjct: 295 M--GYRKHLLEVQYRMHPGINKFPNANFYDNRISDGPSVQQEDYMKSYLPGPIYGAY--- 349
Query: 146 RCPLLLLDTRMPYGALDTGCGEQIDLSGTGSFYNDGEADIVTQHVLNLV-HCGVSP--TA 202
+ ++ M E +D G S N E + T V L C T+
Sbjct: 350 --SFIHIENDM----------EMLDELGQSS-KNMVEVAVATNIVERLAKECSEKRQRTS 396
Query: 203 IAVQSPYIAQVQLLRERL----EEYPGLSGVEVSTIDSFQGREADAVVISMVRSNPLGAV 258
+ V SPY AQV L+ERL + + LS V V +ID FQG E D ++IS VRSN G V
Sbjct: 397 LGVISPYTAQVIALQERLGKQFKNHEFLS-VTVKSIDGFQGGEEDIILISTVRSNKNGKV 455
Query: 259 GFLGDSRRMNVAITRACRHVTVVCDTSTICHS-TFLARLLRHIRRYG 304
GFL D+ R+NVA+TRA + ++ + +T+ S + A L+ +R G
Sbjct: 456 GFLSDAGRINVALTRAKYCLWILGNGATLLASNSIWAELVHDSKRRG 502
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,170,797
Number of extensions: 457401
Number of successful extensions: 1002
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 969
Number of HSP's successfully gapped: 14
Length of query: 331
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 230
Effective length of database: 11,762,187
Effective search space: 2705303010
Effective search space used: 2705303010
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)