BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0663800 Os02g0663800|AK069605
(139 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0663800 Similar to Actin-depolymerizing factor (ADF) 285 1e-77
Os04g0555700 Similar to Actin-depolymerizing factor (ADF) 259 5e-70
Os07g0484200 Similar to Actin-depolymerizing factor 1 (ADF ... 225 8e-60
Os05g0113400 Similar to Actin-depolymerizing factor 2 (ADF 2) 214 2e-56
Os12g0628100 Similar to Actin-depolymerizing factor 6 (ADF-... 186 5e-48
Os03g0780400 Similar to Actin-depolymerizing factor 6 (ADF-... 186 6e-48
Os03g0243100 Similar to Actin-depolymerizing factor 5 (ADF-... 175 1e-44
Os03g0820600 Similar to Actin-depolymerizing factor 3 (ADF ... 175 1e-44
AK105744 175 1e-44
Os10g0521100 Similar to Actin-depolymerizing factor 6 (ADF-... 172 7e-44
Os03g0820500 Similar to WCOR719 166 6e-42
Os07g0297500 145 1e-35
>Os02g0663800 Similar to Actin-depolymerizing factor (ADF)
Length = 139
Score = 285 bits (728), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/139 (100%), Positives = 139/139 (100%)
Query: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL
Sbjct: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
Query: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE
Sbjct: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
Query: 121 LQATDPSEMSMDIVKSRAL 139
LQATDPSEMSMDIVKSRAL
Sbjct: 121 LQATDPSEMSMDIVKSRAL 139
>Os04g0555700 Similar to Actin-depolymerizing factor (ADF)
Length = 139
Score = 259 bits (661), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 123/139 (88%), Positives = 133/139 (95%)
Query: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
M+NSASGMAV DECKLKF ELK+KRSFRFI FKI+E+ QQVVVDRLGQPG++YDDFTA +
Sbjct: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
Query: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
PA ECRYAVFDFDFVTDENCQKSKIFFISW+PDTS+VRSKMLYASSKDRFKRELDGIQVE
Sbjct: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
Query: 121 LQATDPSEMSMDIVKSRAL 139
LQATDPSEMSMDIVK+RAL
Sbjct: 121 LQATDPSEMSMDIVKARAL 139
>Os07g0484200 Similar to Actin-depolymerizing factor 1 (ADF 1) (ZmABP1) (ZmADF1)
Length = 139
Score = 225 bits (573), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 103/138 (74%), Positives = 121/138 (87%)
Query: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
M+NSASG+AV DECK KF ELK +R FRFIVFKI++K ++ V+RLGQ E Y+DF A L
Sbjct: 1 MANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATL 60
Query: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
PADECRYAV+D DFVTDENCQKSKIFF SW+PDT+R RSKMLYASSKDRF+RELDGIQ E
Sbjct: 61 PADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCE 120
Query: 121 LQATDPSEMSMDIVKSRA 138
+QATDPSEMS+DI+++RA
Sbjct: 121 IQATDPSEMSLDIIRARA 138
>Os05g0113400 Similar to Actin-depolymerizing factor 2 (ADF 2)
Length = 138
Score = 214 bits (544), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/137 (74%), Positives = 128/137 (93%)
Query: 2 SNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP 61
+N+ASGMAV DECKLKFLELKAKR++RFI++KI+EK + VVV+++G+P +YDDF A LP
Sbjct: 1 ANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP 60
Query: 62 ADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121
A+ECRYA+FD+DFVT+ENCQKSKIFFI+W+PDTSRVRSKM+YASSKDRFKRELDGIQVEL
Sbjct: 61 ANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 120
Query: 122 QATDPSEMSMDIVKSRA 138
QATDP+E+ +D+++ RA
Sbjct: 121 QATDPTEVGLDVIRGRA 137
>Os12g0628100 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 145
Score = 186 bits (471), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 114/137 (83%)
Query: 2 SNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP 61
+N++SG+ V ECK FLEL+ K+S R+++FKI++K ++VVV++ G ES+DDF LP
Sbjct: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
Query: 62 ADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121
+CRYA++DFDFVT+ENCQKSKIFF++W+P SR+R+KMLYA+SK+RF+RELDG+ E+
Sbjct: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
Query: 122 QATDPSEMSMDIVKSRA 138
QATDPSE+ +++++ RA
Sbjct: 128 QATDPSELDIELLRERA 144
>Os03g0780400 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 145
Score = 186 bits (471), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 80/137 (58%), Positives = 112/137 (81%)
Query: 2 SNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP 61
SN++SGM V + + FLEL+ K++FR+++FKI EK +QVVV++ G ESYDDF A LP
Sbjct: 8 SNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLP 67
Query: 62 ADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121
++CRYA++DFDFVT EN QKSKIFFI+W+P TSR+R+KMLY++SKDR K+ELDG E+
Sbjct: 68 ENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEI 127
Query: 122 QATDPSEMSMDIVKSRA 138
QATDP+E+ +++++ RA
Sbjct: 128 QATDPTEVDLEVLRERA 144
>Os03g0243100 Similar to Actin-depolymerizing factor 5 (ADF-5) (AtADF5)
Length = 143
Score = 175 bits (443), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 105/135 (77%)
Query: 4 SASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPAD 63
+ GM V +EC+ F+E+K K+ RF+V+KI+E+ + V+VD++G PGE Y++ A LP D
Sbjct: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67
Query: 64 ECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQA 123
+CRYAVFDFDFVT +NCQKSKIFFI+W+P SR+R+K+LYA+SK +R LDG+ E+QA
Sbjct: 68 DCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQA 127
Query: 124 TDPSEMSMDIVKSRA 138
TD SEM D+++ RA
Sbjct: 128 TDSSEMGYDVIRGRA 142
>Os03g0820600 Similar to Actin-depolymerizing factor 3 (ADF 3) (ZmABP3) (ZmADF3)
Length = 139
Score = 175 bits (443), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 112/137 (81%)
Query: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
M+NS+SG+A+ D+CKLKF EL++KR RFI F ++ K ++++VD++G SY+DFT+ L
Sbjct: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
Query: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
P +CR+A++DFDF+T E+ KS+IF+I W+PD ++VRSKMLYASS +RFK+EL+GIQ+E
Sbjct: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
Query: 121 LQATDPSEMSMDIVKSR 137
+QATD E+S+D +K R
Sbjct: 121 VQATDAGEISLDALKDR 137
>AK105744
Length = 139
Score = 175 bits (443), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 112/137 (81%)
Query: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
M+NS+SG+A+ D+CKLKF EL++KR RFI F ++ K ++++VD++G SY+DFT+ L
Sbjct: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
Query: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
P +CR+A++DFDF+T E+ KS+IF+I W+PD ++VRSKMLYASS +RFK+EL+GIQ+E
Sbjct: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
Query: 121 LQATDPSEMSMDIVKSR 137
+QATD E+S+D +K R
Sbjct: 121 VQATDAGEISLDALKDR 137
>Os10g0521100 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 151
Score = 172 bits (436), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 109/137 (79%)
Query: 2 SNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP 61
S + + V ++ K F ELK ++ R+++FKI+++ +++VV++ G PGESYDDFTA LP
Sbjct: 12 GGSPAWIEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP 71
Query: 62 ADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121
AD+CRYAV+D DFV+D+NC+KSKIFFISW+P SR+R+K +YA S+++F+ ELDG+ E+
Sbjct: 72 ADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEI 131
Query: 122 QATDPSEMSMDIVKSRA 138
QATDP +M +++++ RA
Sbjct: 132 QATDPDDMDLEVLRGRA 148
>Os03g0820500 Similar to WCOR719
Length = 150
Score = 166 bits (419), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 108/146 (73%), Gaps = 11/146 (7%)
Query: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
M+N+ SG+AV +ECK +F EL+A R+ RF+VFKI++ ++QVVVDR+G +D+ TA L
Sbjct: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
Query: 61 PADECRYAVFDFDFVTDENCQ-----------KSKIFFISWAPDTSRVRSKMLYASSKDR 109
PAD CRYAV+D DF + +SKIFF+SW+P + VRSKM+YASS +
Sbjct: 61 PADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
Query: 110 FKRELDGIQVELQATDPSEMSMDIVK 135
FK+ELDG+Q++LQATDPSE+++D++K
Sbjct: 121 FKKELDGVQIDLQATDPSELTLDVLK 146
>Os07g0297500
Length = 169
Score = 145 bits (365), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 101/137 (73%), Gaps = 4/137 (2%)
Query: 2 SNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP 61
S + + V ++ K F EL ++ R+++FKI+++ +++VV++ G P ESYDDFTA LP
Sbjct: 34 GGSPAWIEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLP 93
Query: 62 ADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121
AD AV+D DFV+D+NC+KSKIFFISW+P S +R+K +YA +++F+ ELDG+ E+
Sbjct: 94 AD----AVYDLDFVSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEI 149
Query: 122 QATDPSEMSMDIVKSRA 138
QATDP +M +++++ RA
Sbjct: 150 QATDPDDMDLEVLRGRA 166
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,117,976
Number of extensions: 144742
Number of successful extensions: 309
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 307
Number of HSP's successfully gapped: 12
Length of query: 139
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 49
Effective length of database: 12,336,541
Effective search space: 604490509
Effective search space used: 604490509
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 151 (62.8 bits)