BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0626600 Os02g0626600|J100054I08
(713 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0626600 Phenylalanine ammonia-lyase family protein 1389 0.0
Os02g0627100 Similar to Phenylalanine ammonia-lyase (EC 4.3... 1329 0.0
Os05g0427400 Similar to Phenylalanine ammonia-lyase (Fragment) 1306 0.0
Os04g0518400 Similar to Phenylalanine ammonia-lyase (Fragment) 1254 0.0
Os04g0518200 Phenylalanine ammonia-lyase 1073 0.0
Os02g0626100 Similar to Phenylalanine ammonia-lyase 1073 0.0
Os11g0708900 Similar to Phenylalanine ammonia-lyase (EC 4.3... 1004 0.0
Os12g0520200 Phenylalanine/histidine ammonia-lyase family p... 872 0.0
Os12g0461300 168 1e-41
Os08g0308200 93 8e-19
Os08g0308300 78 3e-14
>Os02g0626600 Phenylalanine ammonia-lyase family protein
Length = 713
Score = 1389 bits (3596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/713 (95%), Positives = 679/713 (95%)
Query: 1 MACENGQVAADGINGLCMAAPRADPLNWGKAAEEMSGSHLDEVKRMVAEYRQPLVKIEGA 60
MACENGQVAADGINGLCMAAPRADPLNWGKAAEEMSGSHLDEVKRMVAEYRQPLVKIEGA
Sbjct: 1 MACENGQVAADGINGLCMAAPRADPLNWGKAAEEMSGSHLDEVKRMVAEYRQPLVKIEGA 60
Query: 61 SLRIXXXXXXXXXXXXXXELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHRRT 120
SLRI ELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHRRT
Sbjct: 61 SLRIAQVAAVAAAGEARVELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHRRT 120
Query: 121 KEGGALQRELIRFLNAGAFGTGTDGHVLSAEATRAAMLVRINTLLQGYSGIRFEILEAIT 180
KEGGALQRELIRFLNAGAFGTGTDGHVLSAEATRAAMLVRINTLLQGYSGIRFEILEAIT
Sbjct: 121 KEGGALQRELIRFLNAGAFGTGTDGHVLSAEATRAAMLVRINTLLQGYSGIRFEILEAIT 180
Query: 181 KLLNANVTPCLPLRGTVTASGDLVPLSYIAGLVTGRENSVAVAPDGSKVNAAEAFKIAGI 240
KLLNANVTPCLPLRGTVTASGDLVPLSYIAGLVTGRENSVAVAPDGSKVNAAEAFKIAGI
Sbjct: 181 KLLNANVTPCLPLRGTVTASGDLVPLSYIAGLVTGRENSVAVAPDGSKVNAAEAFKIAGI 240
Query: 241 QGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAVLAEVLSAVFCEVMNGKPEYTDH 300
QGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAVLAEVLSAVFCEVMNGKPEYTDH
Sbjct: 241 QGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAVLAEVLSAVFCEVMNGKPEYTDH 300
Query: 301 LTHKLKHHPGQIEAAAIMEHILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQWLGPQ 360
LTHKLKHHPGQIEAAAIMEHILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQWLGPQ
Sbjct: 301 LTHKLKHHPGQIEAAAIMEHILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQWLGPQ 360
Query: 361 IEVIRAATKSIEREINSVNDNPLIDVSRDKALHGGNFQGTPIGVSMDNTRLAIAAIGKLM 420
IEVIRAATKSIEREINSVNDNPLIDVSRDKALHGGNFQGTPIGVSMDNTRLAIAAIGKLM
Sbjct: 361 IEVIRAATKSIEREINSVNDNPLIDVSRDKALHGGNFQGTPIGVSMDNTRLAIAAIGKLM 420
Query: 421 FAQFSELVNDYYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSA 480
FAQFSELVNDYYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSA
Sbjct: 421 FAQFSELVNDYYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSA 480
Query: 481 EQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRQIEENVKSAVKSCVMTV 540
EQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRQIEENVKSAVKSCVMTV
Sbjct: 481 EQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRQIEENVKSAVKSCVMTV 540
Query: 541 ARKTLSTSATGGLHAARFCEKDLLQEIDREAVFAYADDPCSANYPLMKKLRNVLVERALA 600
ARKTLSTSATGGLHAARFCEKDLLQEIDREAVFAYADDPCSANYPLMKKLRNVLVERALA
Sbjct: 541 ARKTLSTSATGGLHAARFCEKDLLQEIDREAVFAYADDPCSANYPLMKKLRNVLVERALA 600
Query: 601 NGAAEFNAETSVFAKVAQFXXXXXXXXXXXXXXXXXXXXNGTAATPNRITECRSYPLYRF 660
NGAAEFNAETSVFAKVAQF NGTAATPNRITECRSYPLYRF
Sbjct: 601 NGAAEFNAETSVFAKVAQFEEELRAALPAAVLAARAAVENGTAATPNRITECRSYPLYRF 660
Query: 661 VREELGTAYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGAPLPIC 713
VREELGTAYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGAPLPIC
Sbjct: 661 VREELGTAYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGAPLPIC 713
>Os02g0627100 Similar to Phenylalanine ammonia-lyase (EC 4.3.1.5)
Length = 713
Score = 1329 bits (3440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/713 (90%), Positives = 665/713 (93%)
Query: 1 MACENGQVAADGINGLCMAAPRADPLNWGKAAEEMSGSHLDEVKRMVAEYRQPLVKIEGA 60
M CENG+V+A+G++GLC+AAPRADPLNWGKA EEM+GSHLDEVKRMVAEYRQPLVKIEGA
Sbjct: 1 MECENGRVSANGMSGLCVAAPRADPLNWGKATEEMTGSHLDEVKRMVAEYRQPLVKIEGA 60
Query: 61 SLRIXXXXXXXXXXXXXXELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHRRT 120
SLRI ELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHRRT
Sbjct: 61 SLRIAQVAAVAAAGEARVELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHRRT 120
Query: 121 KEGGALQRELIRFLNAGAFGTGTDGHVLSAEATRAAMLVRINTLLQGYSGIRFEILEAIT 180
KEGGALQRELIRFLNAGAFGTGTDGHVL AEATRAAMLVRINTLLQGYSGIRFEILEAI
Sbjct: 121 KEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEILEAIA 180
Query: 181 KLLNANVTPCLPLRGTVTASGDLVPLSYIAGLVTGRENSVAVAPDGSKVNAAEAFKIAGI 240
KLLNANVTPCLPLRGT+TASGDLVPLSYIAGLVTGREN+VAVAPDGSKVNAAEAFKIAGI
Sbjct: 181 KLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRENAVAVAPDGSKVNAAEAFKIAGI 240
Query: 241 QGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAVLAEVLSAVFCEVMNGKPEYTDH 300
QGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILA+LAEVLSAVFCEVMNGKPEYTDH
Sbjct: 241 QGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAILAEVLSAVFCEVMNGKPEYTDH 300
Query: 301 LTHKLKHHPGQIEAAAIMEHILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQWLGPQ 360
LTHKLKHHPGQIEAAAIMEHILEGSSYMK AKKLGELDPLMKPKQDRYALRTSPQWLGPQ
Sbjct: 301 LTHKLKHHPGQIEAAAIMEHILEGSSYMKHAKKLGELDPLMKPKQDRYALRTSPQWLGPQ 360
Query: 361 IEVIRAATKSIEREINSVNDNPLIDVSRDKALHGGNFQGTPIGVSMDNTRLAIAAIGKLM 420
IEVIRAATKSIEREINSVNDNPLIDVSR KALHGGNFQGTPIGVSMDNTRLAIAAIGKLM
Sbjct: 361 IEVIRAATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAAIGKLM 420
Query: 421 FAQFSELVNDYYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSA 480
FAQFSELVND+YNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSA
Sbjct: 421 FAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSA 480
Query: 481 EQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRQIEENVKSAVKSCVMTV 540
EQHNQDVNSLGLISSRKT EA++ILKLMSSTFL+ALCQA+DLR IEENVKSAVKSCVMTV
Sbjct: 481 EQHNQDVNSLGLISSRKTDEAIDILKLMSSTFLIALCQAVDLRHIEENVKSAVKSCVMTV 540
Query: 541 ARKTLSTSATGGLHAARFCEKDLLQEIDREAVFAYADDPCSANYPLMKKLRNVLVERALA 600
A+KTLST++TG LH ARFCEKDLL+EIDREAVFAYADDPCS NYPLMKKLRNVLVERALA
Sbjct: 541 AKKTLSTNSTGDLHVARFCEKDLLKEIDREAVFAYADDPCSHNYPLMKKLRNVLVERALA 600
Query: 601 NGAAEFNAETSVFAKVAQFXXXXXXXXXXXXXXXXXXXXNGTAATPNRITECRSYPLYRF 660
NGAAEFNA+TSVFAKVAQF NGTAA P+RITECRSYPLYRF
Sbjct: 601 NGAAEFNADTSVFAKVAQFEEELRATLPGAIEAARAAVENGTAAIPSRITECRSYPLYRF 660
Query: 661 VREELGTAYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGAPLPIC 713
VREELGT YLTGEKTRSPGEELNKVLVAIN+GKHIDPLLECLKEWNG PLPIC
Sbjct: 661 VREELGTKYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNGEPLPIC 713
>Os05g0427400 Similar to Phenylalanine ammonia-lyase (Fragment)
Length = 716
Score = 1306 bits (3379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/716 (88%), Positives = 655/716 (91%), Gaps = 3/716 (0%)
Query: 1 MACENGQVAADGINGLCMAAPRADPLNWGKAAEEMSGSHLDEVKRMVAEYRQPLVKIEGA 60
M CE G VAA GLCM PRADPLNWGKAAEEM+GSHLDEVKRMVAEYRQP+V+IEGA
Sbjct: 1 MECETGYVAAAADGGLCMEVPRADPLNWGKAAEEMAGSHLDEVKRMVAEYRQPVVRIEGA 60
Query: 61 SLRIXXXXXXXXXX---XXXXELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSH 117
SLRI ELDESARERVKASSDWVMNSM NGTDSYGVTTGFGATSH
Sbjct: 61 SLRIAQVAAVAGAGDGEAAMVELDESARERVKASSDWVMNSMANGTDSYGVTTGFGATSH 120
Query: 118 RRTKEGGALQRELIRFLNAGAFGTGTDGHVLSAEATRAAMLVRINTLLQGYSGIRFEILE 177
RRTKEGGALQRELIRFLNAGAFGTG DGHVL A ATRAAMLVRINTLLQGYSGIRFEILE
Sbjct: 121 RRTKEGGALQRELIRFLNAGAFGTGADGHVLPAGATRAAMLVRINTLLQGYSGIRFEILE 180
Query: 178 AITKLLNANVTPCLPLRGTVTASGDLVPLSYIAGLVTGRENSVAVAPDGSKVNAAEAFKI 237
A+ KLLNANVTPCLPLRGT+TASGDLVPLSYIAGLVTGRENSVAVAPDG KVNAAEAFKI
Sbjct: 181 AVAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRENSVAVAPDGRKVNAAEAFKI 240
Query: 238 AGIQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAVLAEVLSAVFCEVMNGKPEY 297
AGIQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEAN+LA+LAEVLSAVFCEVMNGKPEY
Sbjct: 241 AGIQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANVLAILAEVLSAVFCEVMNGKPEY 300
Query: 298 TDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQWL 357
TDHLTHKLKHHPGQIEAAAIMEHILEGSSYMK AK+LGELDPLMKPKQDRYALRTSPQWL
Sbjct: 301 TDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKEAKRLGELDPLMKPKQDRYALRTSPQWL 360
Query: 358 GPQIEVIRAATKSIEREINSVNDNPLIDVSRDKALHGGNFQGTPIGVSMDNTRLAIAAIG 417
GPQIEVIRAATKSIEREINSVNDNPLIDVSR KALHGGNFQGTPIGVSMDNTRLAIAAIG
Sbjct: 361 GPQIEVIRAATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAAIG 420
Query: 418 KLMFAQFSELVNDYYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHV 477
KLMFAQFSELVND+YNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHV
Sbjct: 421 KLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHV 480
Query: 478 QSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRQIEENVKSAVKSCV 537
QSAEQHNQDVNSLGLISSRKTAEA++ILKLMSSTFLVALCQAIDLR IEENVK AVK+CV
Sbjct: 481 QSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHIEENVKGAVKTCV 540
Query: 538 MTVARKTLSTSATGGLHAARFCEKDLLQEIDREAVFAYADDPCSANYPLMKKLRNVLVER 597
MTVA+KTLST++TGGLH ARFCEKDLL EIDREAVFAYADDPCSANYPLMKKLR+VLVER
Sbjct: 541 MTVAKKTLSTNSTGGLHVARFCEKDLLSEIDREAVFAYADDPCSANYPLMKKLRSVLVER 600
Query: 598 ALANGAAEFNAETSVFAKVAQFXXXXXXXXXXXXXXXXXXXXNGTAATPNRITECRSYPL 657
ALANGAAEF+AETSV AKVA+F +GTAA PNRI ECRSYPL
Sbjct: 601 ALANGAAEFDAETSVLAKVARFEEELRAALPRAVEAARAAVESGTAAAPNRIAECRSYPL 660
Query: 658 YRFVREELGTAYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGAPLPIC 713
YRFVREELGTAYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGAPLPIC
Sbjct: 661 YRFVREELGTAYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGAPLPIC 716
>Os04g0518400 Similar to Phenylalanine ammonia-lyase (Fragment)
Length = 714
Score = 1254 bits (3244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/715 (85%), Positives = 634/715 (88%), Gaps = 3/715 (0%)
Query: 1 MACENGQVAADGING--LCMAAPRADPLNWGKAAEEMSGSHLDEVKRMVAEYRQPLVKIE 58
M CENG VAA NG LC+A PRADPLNWGKAAEE+SGSHLD VKRMV EYR+P+V IE
Sbjct: 1 MECENGHVAA-AANGSSLCVAKPRADPLNWGKAAEELSGSHLDAVKRMVEEYRRPVVTIE 59
Query: 59 GASLRIXXXXXXXXXXXXXXELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHR 118
GASL I ELDESAR RVKASSDWVMNSMMNGTDSYGVTTGFGATSHR
Sbjct: 60 GASLTIAQVAAVASAGAARVELDESARGRVKASSDWVMNSMMNGTDSYGVTTGFGATSHR 119
Query: 119 RTKEGGALQRELIRFLNAGAFGTGTDGHVLSAEATRAAMLVRINTLLQGYSGIRFEILEA 178
RTKEGGALQRELIRFLNAGAFG G DGHVL A ATRAAMLVRINTLLQGYSGIRFEILE
Sbjct: 120 RTKEGGALQRELIRFLNAGAFGNGDDGHVLPAAATRAAMLVRINTLLQGYSGIRFEILET 179
Query: 179 ITKLLNANVTPCLPLRGTVTASGDLVPLSYIAGLVTGRENSVAVAPDGSKVNAAEAFKIA 238
I LLNANVTPCLPLRGT+TASGDLVPLSYIAGLVTGR NSVAV PDG KV+AAEAFKIA
Sbjct: 180 IATLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRPNSVAVTPDGRKVDAAEAFKIA 239
Query: 239 GIQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAVLAEVLSAVFCEVMNGKPEYT 298
GIQ GFFELQPKEGLAMVNGTAVGSGLAS VLFEAN+L VLAEVLSAVFCEVMNGKPEYT
Sbjct: 240 GIQHGFFELQPKEGLAMVNGTAVGSGLASMVLFEANVLGVLAEVLSAVFCEVMNGKPEYT 299
Query: 299 DHLTHKLKHHPGQIEAAAIMEHILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQWLG 358
DHLTHKLKHHPGQIEAAAIMEHILEGSSYM LAKKLGELDPLMKPKQDRYALRTSPQWLG
Sbjct: 300 DHLTHKLKHHPGQIEAAAIMEHILEGSSYMMLAKKLGELDPLMKPKQDRYALRTSPQWLG 359
Query: 359 PQIEVIRAATKSIEREINSVNDNPLIDVSRDKALHGGNFQGTPIGVSMDNTRLAIAAIGK 418
PQIEVIRAATKSIEREINSVNDNPLIDVSR KALHGGNFQGTPIGVSMDNTRLAIAAIGK
Sbjct: 360 PQIEVIRAATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAAIGK 419
Query: 419 LMFAQFSELVNDYYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQ 478
LMFAQFSELVND+YNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFL NPVTNHVQ
Sbjct: 420 LMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQ 479
Query: 479 SAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRQIEENVKSAVKSCVM 538
SAEQHNQDVNSLGLISSRKTAEA+++LKLMSSTFL+ALCQAIDLR +EENV+SAVK CV
Sbjct: 480 SAEQHNQDVNSLGLISSRKTAEAIDVLKLMSSTFLIALCQAIDLRHLEENVRSAVKGCVT 539
Query: 539 TVARKTLSTSATGGLHAARFCEKDLLQEIDREAVFAYADDPCSANYPLMKKLRNVLVERA 598
TVARKTLSTSATG LH ARFCEKDLLQ IDREAVFAYADDPCSANYPLM+K+R VL+E A
Sbjct: 540 TVARKTLSTSATGDLHKARFCEKDLLQAIDREAVFAYADDPCSANYPLMQKMRAVLIEHA 599
Query: 599 LANGAAEFNAETSVFAKVAQFXXXXXXXXXXXXXXXXXXXXNGTAATPNRITECRSYPLY 658
LANG AE N +TSVFAKVA F NGTAA NRITECRSYPLY
Sbjct: 600 LANGEAERNVDTSVFAKVATFEEELRVALPREVEAARAAVENGTAAKANRITECRSYPLY 659
Query: 659 RFVREELGTAYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGAPLPIC 713
RFVREELGT YLTGEKTRSPGEE+NKV VA+NQGKHID LLECLKEWNG PLPIC
Sbjct: 660 RFVREELGTEYLTGEKTRSPGEEVNKVFVAMNQGKHIDALLECLKEWNGEPLPIC 714
>Os04g0518200 Phenylalanine ammonia-lyase
Length = 707
Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/694 (74%), Positives = 584/694 (84%), Gaps = 3/694 (0%)
Query: 23 ADPLNWGKAAEEMSGSHLDEVKRMVAEYRQPLVKIEGASLRIXXXXXXXXXXXXX---XE 79
+DPL+WGKAA EM+GSHLDEVKRMVA+ R+ +VKIEG+SLR+ E
Sbjct: 14 SDPLSWGKAALEMTGSHLDEVKRMVAQSREAVVKIEGSSLRVGQVAAVSAAKDASGVVVE 73
Query: 80 LDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHRRTKEGGALQRELIRFLNAGAF 139
LDE AR RVKASS+W++N + +G D YGVTTGFG TSHRRTK+G ALQ EL+R LNAG F
Sbjct: 74 LDEEARPRVKASSEWILNCIAHGGDIYGVTTGFGGTSHRRTKDGQALQVELLRHLNAGIF 133
Query: 140 GTGTDGHVLSAEATRAAMLVRINTLLQGYSGIRFEILEAITKLLNANVTPCLPLRGTVTA 199
G G+DG+ L +E +RAAMLVRINTLLQGYSGIRFEILEAITKL+N V+PCLPLRGT+TA
Sbjct: 134 GNGSDGNSLPSEVSRAAMLVRINTLLQGYSGIRFEILEAITKLINTGVSPCLPLRGTITA 193
Query: 200 SGDLVPLSYIAGLVTGRENSVAVAPDGSKVNAAEAFKIAGIQGGFFELQPKEGLAMVNGT 259
SGDLVPLSYIAGL+TGR N+ AV DG KV+AAEAFKIAGIQGGFF L+PKEGLA+VNGT
Sbjct: 194 SGDLVPLSYIAGLITGRPNAQAVTVDGKKVDAAEAFKIAGIQGGFFRLEPKEGLAIVNGT 253
Query: 260 AVGSGLASTVLFEANILAVLAEVLSAVFCEVMNGKPEYTDHLTHKLKHHPGQIEAAAIME 319
+VGS LA+ VL++AN+LAVL+EVLSAVFCEVMNGKPEYTDHLTHKLKHHPG IEAAAIME
Sbjct: 254 SVGSALAAMVLYDANVLAVLSEVLSAVFCEVMNGKPEYTDHLTHKLKHHPGSIEAAAIME 313
Query: 320 HILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREINSVN 379
HIL GS++M A+K+ E+DPL+KPKQDRYALRTSPQWLGPQIEVIRAATKSIERE+NSVN
Sbjct: 314 HILAGSAFMPHAQKVNEVDPLLKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREVNSVN 373
Query: 380 DNPLIDVSRDKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDYYNNGLPSN 439
DNP+IDV R KALHGGNFQGTPIGVSMDNTRLAIA IGKLMFAQFSELVN++YNNGL SN
Sbjct: 374 DNPVIDVHRGKALHGGNFQGTPIGVSMDNTRLAIANIGKLMFAQFSELVNEFYNNGLTSN 433
Query: 440 LSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTA 499
L+G RNPSLDYGFKG EIAMASYCSELQFL NPVTNHVQSAEQHNQDVNSLGL+S+RKTA
Sbjct: 434 LAGSRNPSLDYGFKGTEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLVSARKTA 493
Query: 500 EAVEILKLMSSTFLVALCQAIDLRQIEENVKSAVKSCVMTVARKTLSTSATGGLHAARFC 559
EAV+ILKLMSST+LVALCQA+DLR +EEN+KSAVK+CV TVA+K L+T GGLH+ARF
Sbjct: 494 EAVDILKLMSSTYLVALCQAVDLRHLEENLKSAVKNCVTTVAKKVLTTGPAGGLHSARFS 553
Query: 560 EKDLLQEIDREAVFAYADDPCSANYPLMKKLRNVLVERALANGAAEFNAETSVFAKVAQF 619
EK LL IDREAV++YADDPCSANYPLM K+R VLVE ALANG AE + +SVF+K+ F
Sbjct: 554 EKALLTAIDREAVYSYADDPCSANYPLMTKIRAVLVEHALANGPAEKDDGSSVFSKITAF 613
Query: 620 XXXXXXXXXXXXXXXXXXXXNGTAATPNRITECRSYPLYRFVREELGTAYLTGEKTRSPG 679
GTA NRI E RS+PLYRFVREELG YLTGEK +SPG
Sbjct: 614 EEELREALPREMEAARVAFETGTAPITNRIKESRSFPLYRFVREELGCVYLTGEKLKSPG 673
Query: 680 EELNKVLVAINQGKHIDPLLECLKEWNGAPLPIC 713
EE NKV +AI++ K IDP+LECLKEWNG PLPIC
Sbjct: 674 EECNKVFLAISERKLIDPMLECLKEWNGEPLPIC 707
>Os02g0626100 Similar to Phenylalanine ammonia-lyase
Length = 701
Score = 1073 bits (2774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/694 (73%), Positives = 584/694 (84%), Gaps = 5/694 (0%)
Query: 22 RADPLNWGKAAEEMSGSHLDEVKRMVAEYRQPLVKIEGASLRIXXXXXXXXXXX---XXX 78
+ DPLNWG AA EM+GSHLDEVKRMVA++R+PLVKI+GA+LR+
Sbjct: 9 KEDPLNWGAAAAEMAGSHLDEVKRMVAQFREPLVKIQGATLRVGQVAAVAQAKDAAGVAV 68
Query: 79 ELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHRRTKEGGALQRELIRFLNAGA 138
ELDE AR RVKASS+W++N + +G D YGVTTGFG TSHRRTK+G ALQ EL+R LNAG
Sbjct: 69 ELDEEARPRVKASSEWILNCIAHGGDIYGVTTGFGGTSHRRTKDGPALQVELLRHLNAGI 128
Query: 139 FGTGTDGHVLSAEATRAAMLVRINTLLQGYSGIRFEILEAITKLLNANVTPCLPLRGTVT 198
FGTG+DGH L +E RAAMLVRINTLLQGYSGIRFEILEAITKLLN VTPCLPLRGT+T
Sbjct: 129 FGTGSDGHTLPSETVRAAMLVRINTLLQGYSGIRFEILEAITKLLNTGVTPCLPLRGTIT 188
Query: 199 ASGDLVPLSYIAGLVTGRENSVAVAPDGSKVNAAEAFKIAGIQGGFFELQPKEGLAMVNG 258
ASGDLVPLSYIAGL+TGR N+ A++PDG KV+AAEAFK+AGI+GGFF L PKEGLA+VNG
Sbjct: 189 ASGDLVPLSYIAGLITGRPNAQAISPDGRKVDAAEAFKLAGIEGGFFTLNPKEGLAIVNG 248
Query: 259 TAVGSGLASTVLFEANILAVLAEVLSAVFCEVMNGKPEYTDHLTHKLKHHPGQIEAAAIM 318
T+VGS LA+TV+F+ANILAVL+EVLSAVFCEVMNGKPEYTDHLTHKLKHHPG IEAAAIM
Sbjct: 249 TSVGSALAATVMFDANILAVLSEVLSAVFCEVMNGKPEYTDHLTHKLKHHPGSIEAAAIM 308
Query: 319 EHILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREINSV 378
EHIL GSS+M AKK+ E+DPL+KPKQDRYALRTSPQWLGPQIEVIRAATKSIERE+NSV
Sbjct: 309 EHILAGSSFMSHAKKVNEMDPLLKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREVNSV 368
Query: 379 NDNPLIDVSRDKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDYYNNGLPS 438
NDNP+IDV R KALHGGNFQGTPIGVSMDN RLAIA IGKLMFAQFSELVN++YNNGL S
Sbjct: 369 NDNPVIDVHRGKALHGGNFQGTPIGVSMDNARLAIANIGKLMFAQFSELVNEFYNNGLTS 428
Query: 439 NLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKT 498
NL+G RNPSLDYGFKG EIAMASYCSELQ+L NP+TNHVQSAEQHNQDVNSLGL+S+RKT
Sbjct: 429 NLAGSRNPSLDYGFKGTEIAMASYCSELQYLANPITNHVQSAEQHNQDVNSLGLVSARKT 488
Query: 499 AEAVEILKLMSSTFLVALCQAIDLRQIEENVKSAVKSCVMTVARKTLSTSATGGLHAARF 558
EAV+ILKLM+ST++VALCQA+DLR +EEN+KS+VK+CV VA+K L+ + TG L +ARF
Sbjct: 489 LEAVDILKLMTSTYIVALCQAVDLRHLEENIKSSVKNCVTQVAKKVLTMNPTGDLSSARF 548
Query: 559 CEKDLLQEIDREAVFAYADDPCSANYPLMKKLRNVLVERALANGAAEFNAETSVFAKVAQ 618
EK+LL IDREAVF+YADDPCSANYPLM+KLR VLVE AL +G AE E SVF+K+ +
Sbjct: 549 SEKNLLTAIDREAVFSYADDPCSANYPLMQKLRAVLVEHALTSGDAE--PEASVFSKITK 606
Query: 619 FXXXXXXXXXXXXXXXXXXXXNGTAATPNRITECRSYPLYRFVREELGTAYLTGEKTRSP 678
F NGTA NRI E RS+PLYRFVREELG +LTGEK +SP
Sbjct: 607 FEEELRSALPREIEAARVAVANGTAPVANRIVESRSFPLYRFVREELGCVFLTGEKLKSP 666
Query: 679 GEELNKVLVAINQGKHIDPLLECLKEWNGAPLPI 712
GEE NKV + I+QGK IDP+L+CLKEWNG PLPI
Sbjct: 667 GEECNKVFLGISQGKLIDPMLDCLKEWNGEPLPI 700
>Os11g0708900 Similar to Phenylalanine ammonia-lyase (EC 4.3.1.5) (Fragment)
Length = 700
Score = 1004 bits (2596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/720 (70%), Positives = 575/720 (79%), Gaps = 29/720 (4%)
Query: 1 MACENGQVAADGINGLCMAAPR-ADPLNWGKAAEEMSGSHLDEVKRMVAEYRQPLVKIEG 59
M CE G +NG + PR +DPL WGKAAE ++GSHL+EVKRMV EYR PLVKI+G
Sbjct: 1 MECETG------VNG---SGPRGSDPLYWGKAAEGVAGSHLEEVKRMVVEYRAPLVKIDG 51
Query: 60 ASLRIXXXXXXX-XXXXXXXELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHR 118
A L + LDESAR R++AS +WV S MNGTD+YGVTTGFG +HR
Sbjct: 52 AMLSVAKVAAVAGEAARVQVVLDESARPRLEASREWVFESTMNGTDTYGVTTGFGGAAHR 111
Query: 119 RTKEGGALQRELIRFLNAGAFGTG-TDGHVLSAEATRAAMLVRINTLLQGYSGIRFEILE 177
RTKE ALQ+ELIR+LNAG FG +DG+ L E TRAAMLVRINTL QGYSGIRFEILE
Sbjct: 112 RTKEFAALQKELIRYLNAGVFGASRSDGYTLPTEVTRAAMLVRINTLTQGYSGIRFEILE 171
Query: 178 AITKLLNANVTPCLPLRGTVTASGDLVPLSYIAGLVTGRENSVAVAPDGSKVNAAEAFKI 237
AI KLLNANVTPCLPLRGT+TASGDLVPLSYIAGL+TGR NS AVAPDG+KV+AAEAF++
Sbjct: 172 AIAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRHNSAAVAPDGTKVDAAEAFRM 231
Query: 238 AGIQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAVLAEVLSAVFCEVMNGKPEY 297
AGI+ GFF LQPKEGLA+VNGTAVGSGLA+ VLFEAN+LAVLAEVLSAV+CEVM G PEY
Sbjct: 232 AGIEHGFFALQPKEGLAIVNGTAVGSGLAAIVLFEANVLAVLAEVLSAVYCEVMAGNPEY 291
Query: 298 TDHLTHKLKHHPGQIEAAAIMEHILEGSSYMK-LAKK----LGELDPLMKPKQDRYALRT 352
TDHL H LKHHPGQIEAAAIMEHILEGSSYMK LAK GELD L K KQDRYA+RT
Sbjct: 292 TDHLIHALKHHPGQIEAAAIMEHILEGSSYMKKLAKDKEQGQGELDRLTKLKQDRYAIRT 351
Query: 353 SPQWLGPQIEVIRAATKSIEREINSVNDNPLIDVSRDKALHGGNFQGTPIGVSMDNTRLA 412
+PQWLGPQ+EVIR ATKSIEREINSVNDNP+IDV+R KALHGGNFQGTP+GVSMDNTRLA
Sbjct: 352 APQWLGPQVEVIRFATKSIEREINSVNDNPVIDVARRKALHGGNFQGTPVGVSMDNTRLA 411
Query: 413 IAAIGKLMFAQFSELVNDYYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNP 472
IAAIG+LMF+QFSELV+ +Y+NGLPSNLSGGRNPSLDYGF GAE+AMASYCSELQFL NP
Sbjct: 412 IAAIGRLMFSQFSELVSSFYSNGLPSNLSGGRNPSLDYGFNGAEVAMASYCSELQFLANP 471
Query: 473 VTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRQIEENVKSA 532
VTNHVQ+AEQHNQ VNSLGLISSR TAEAV ILKLMSSTFL+ALCQA+DLRQ+EE++K+A
Sbjct: 472 VTNHVQTAEQHNQSVNSLGLISSRMTAEAVTILKLMSSTFLIALCQAVDLRQLEESIKAA 531
Query: 533 VKSCVMTVARKTLSTSATGGLHAARFCEKDLLQEIDREAVFAYADDPCSANYPLMKKLRN 592
V CV VA+K+L+ + + L IDR AVF YA+DPC ++ PLM+KLR
Sbjct: 532 VNKCVTNVAKKSLTLA----MDDDDHLLALLGAAIDRVAVFTYAEDPCRSSLPLMQKLRA 587
Query: 593 VLVERALANGAAEFNAETSVFAKVAQFXXXXXXXXXXXXXXXXXXXXNGTAATPNRITEC 652
VL+E ALAN N + + AKVA+F +GTA PNRI++C
Sbjct: 588 VLMEHALAN-----NGDI-LLAKVAEFEQQLRAVLPDEVEAARAAVESGTA--PNRISDC 639
Query: 653 RSYPLYRFVREELGTAYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGAPLPI 712
RSYPLYRFVR+ELG YLTGEKTRSPGEE++KV++A+NQ KHI PLLECL EW GAPLP+
Sbjct: 640 RSYPLYRFVRKELGAEYLTGEKTRSPGEEVDKVVIAMNQHKHIHPLLECLSEWKGAPLPL 699
>Os12g0520200 Phenylalanine/histidine ammonia-lyase family protein
Length = 567
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/582 (73%), Positives = 485/582 (83%), Gaps = 17/582 (2%)
Query: 132 RFLNAGAFGTG-TDGHVLSAEATRAAMLVRINTLLQGYSGIRFEILEAITKLLNANVTPC 190
R+LNAG FG +DG+ L E TRAAMLVRINTL QGYSGIRFEILEAI KLLNANVTPC
Sbjct: 1 RYLNAGVFGASRSDGYTLPTEVTRAAMLVRINTLTQGYSGIRFEILEAIAKLLNANVTPC 60
Query: 191 LPLRGTVTASGDLVPLSYIAGLVTGRENSVAVAPDGSKVNAAEAFKIAGIQGGFFELQPK 250
LPLRGT+TASGDLVPLSYIAGL+TGR+NS AVAPDGSKV+AAEAF+IAGI+ GFF LQPK
Sbjct: 61 LPLRGTITASGDLVPLSYIAGLITGRQNSAAVAPDGSKVDAAEAFRIAGIEHGFFALQPK 120
Query: 251 EGLAMVNGTAVGSGLASTVLFEANILAVLAEVLSAVFCEVMNGKPEYTDHLTHKLKHHPG 310
EGLA+VNGTAVGSGLA+ VLFEAN+LAVLAEVLSAV+CEVM G PEYTDHL H LKHHPG
Sbjct: 121 EGLAIVNGTAVGSGLAAIVLFEANVLAVLAEVLSAVYCEVMAGNPEYTDHLIHALKHHPG 180
Query: 311 QIEAAAIMEHILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQWLGPQIEVIRAATKS 370
QIEAAAIMEHILEGSSYM+LAK+ GELD L K +QDRYA+RT+PQWLGPQ+EVIR ATKS
Sbjct: 181 QIEAAAIMEHILEGSSYMRLAKEQGELDRLTKLRQDRYAIRTAPQWLGPQVEVIRFATKS 240
Query: 371 IEREINSVNDNPLIDVSRDKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVND 430
IEREINSVNDNP+IDV+R KALHGGNFQGTPIGVSMDNTRLAIAAIG+LMF+QFSEL +
Sbjct: 241 IEREINSVNDNPVIDVARRKALHGGNFQGTPIGVSMDNTRLAIAAIGRLMFSQFSELASS 300
Query: 431 YYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSL 490
+Y+NGLPSNLSGGRNPSLDYGF GAE+AMASYCSELQFL NPVTNHVQ+AEQHNQ VNSL
Sbjct: 301 FYSNGLPSNLSGGRNPSLDYGFNGAEVAMASYCSELQFLANPVTNHVQTAEQHNQSVNSL 360
Query: 491 GLISSRKTAEAVEILKLMSSTFLVALCQAIDLRQIEENVKSAVKSCVMTVARKTLSTSAT 550
GLISSR TAEAV ILKLMSSTFL+ALCQA+DLRQ+EE++K+AV CV VA+K+L+
Sbjct: 361 GLISSRMTAEAVTILKLMSSTFLIALCQAVDLRQLEESIKAAVNKCVTNVAKKSLAMDDD 420
Query: 551 GGLHAARFCEKDLLQEIDREAVFAYADDPCSANYPLMKKLRNVLVERALANGAAEFNAET 610
L IDR AVF YA+DPC ++ PL++KLR VL++ ALANG +
Sbjct: 421 DLLALLG-------AAIDRVAVFTYAEDPCRSSLPLIQKLRAVLMDHALANGDNQ----- 468
Query: 611 SVFAKVAQFXXXXXXXXXXXXXXXXXXXXNGTAATPNRITECRSYPLYRFVREELGTAYL 670
AKVA+F +GTA PNRIT+CRSYPLYRFVR+ELG YL
Sbjct: 469 --LAKVAEFEQQLRAVLHDEVEAARAAVESGTA--PNRITQCRSYPLYRFVRKELGAEYL 524
Query: 671 TGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGAPLPI 712
TGEKTRSPGEE++KV++A+NQ KHI+PLLECL EW GAPLP+
Sbjct: 525 TGEKTRSPGEEVDKVVIAMNQHKHINPLLECLSEWKGAPLPL 566
>Os12g0461300
Length = 128
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 93/128 (72%), Gaps = 1/128 (0%)
Query: 587 MKKLRNVLVERALANGAAEFNAETSVFAKVAQFXXXXXXXXXXXXXXX-XXXXXNGTAAT 645
M+K+R++L+E LANG AE N +TSVFAKVA F NGTAA
Sbjct: 1 MQKMRSILIEHGLANGEAERNVDTSVFAKVATFEEELRVALPREERRLPRAAVENGTAAK 60
Query: 646 PNRITECRSYPLYRFVREELGTAYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEW 705
NRITECRSYPLYR VR+ELGT YLTGEKTRSPGEE+NKV VA+N GKHID LLECLKEW
Sbjct: 61 ANRITECRSYPLYRSVRKELGTEYLTGEKTRSPGEEVNKVSVAMNLGKHIDALLECLKEW 120
Query: 706 NGAPLPIC 713
NG PLPIC
Sbjct: 121 NGEPLPIC 128
>Os08g0308200
Length = 153
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 55/89 (61%)
Query: 586 LMKKLRNVLVERALANGAAEFNAETSVFAKVAQFXXXXXXXXXXXXXXXXXXXXNGTAAT 645
LM+K+R VL+E ALAN AE N TSVFAKVA F NGTAA
Sbjct: 59 LMQKMRTVLIEHALANSEAERNVNTSVFAKVAMFEEKLRAALPREVEATRAAVENGTAAK 118
Query: 646 PNRITECRSYPLYRFVREELGTAYLTGEK 674
NRITEC+SY LYRFV +EL T YLTG+K
Sbjct: 119 ANRITECKSYSLYRFVCKELRTEYLTGKK 147
>Os08g0308300
Length = 111
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 587 MKKLRNVLVERALANGAAEFNAETSVFAKVAQFXXXXXXXXXXXXXXXXXXXXNGTAATP 646
M+K+R VL+E ALAN AE N SVFAKVA F ATP
Sbjct: 1 MQKMRTVLIEHALANSEAERNVNISVFAKVAMFEEELRAALPRE-----------VEATP 49
Query: 647 NRITECRSYPLYRFVREELGTAYLTGEK 674
ITECRSY LYRFVR+ELG YLTGEK
Sbjct: 50 --ITECRSYSLYRFVRKELGIEYLTGEK 75
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.132 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,779,582
Number of extensions: 843147
Number of successful extensions: 1989
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1969
Number of HSP's successfully gapped: 11
Length of query: 713
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 605
Effective length of database: 11,396,689
Effective search space: 6894996845
Effective search space used: 6894996845
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 160 (66.2 bits)