BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0543200 Os02g0543200|AK100963
(493 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0543200 Cyclin-like F-box domain containing protein 871 0.0
Os12g0128000 Cyclin-like F-box domain containing protein 156 4e-38
Os10g0391200 Cyclin-like F-box domain containing protein 145 8e-35
Os04g0195100 Cyclin-like F-box domain containing protein 143 2e-34
Os11g0131300 140 3e-33
Os04g0193300 Cyclin-like F-box domain containing protein 125 7e-29
Os10g0124500 Cyclin-like F-box domain containing protein 124 2e-28
Os04g0191800 Cyclin-like F-box domain containing protein 121 1e-27
Os04g0194000 Cyclin-like F-box domain containing protein 118 1e-26
Os02g0132900 70 3e-12
Os05g0128600 Conserved hypothetical protein 70 4e-12
>Os02g0543200 Cyclin-like F-box domain containing protein
Length = 493
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/493 (88%), Positives = 435/493 (88%)
Query: 1 MADNGGHEDAPPNGDHHPPAIVANGDDQEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
MADNGGHEDAPPNGDHHPPAIVANGDDQEP
Sbjct: 1 MADNGGHEDAPPNGDHHPPAIVANGDDQEPAANGDDQAEAAANGGDQAAAANDQAAAEND 60
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLPNVAGIRAPRELRRVEVDALHQVLLRMPA 120
RDLPNVAGIRAPRELRRVEVDALHQVLLRMPA
Sbjct: 61 QAAAENDQAAAENDQAAAANGGEHEEANRDLPNVAGIRAPRELRRVEVDALHQVLLRMPA 120
Query: 121 AEVARCSGVCRRLRDLIATDSFRRGHQRHRSRHPMPLFFYRLDHWAFPDRVRVHLRAVDV 180
AEVARCSGVCRRLRDLIATDSFRRGHQRHRSRHPMPLFFYRLDHWAFPDRVRVHLRAVDV
Sbjct: 121 AEVARCSGVCRRLRDLIATDSFRRGHQRHRSRHPMPLFFYRLDHWAFPDRVRVHLRAVDV 180
Query: 181 AARETHPVICFSHADADLRSADPRVFTIEGSCDGILLLSYHTRLYACNPSTRRWRRLPPL 240
AARETHPVICFSHADADLRSADPRVFTIEGSCDGILLLSYHTRLYACNPSTRRWRRLPPL
Sbjct: 181 AARETHPVICFSHADADLRSADPRVFTIEGSCDGILLLSYHTRLYACNPSTRRWRRLPPL 240
Query: 241 HDDHVIVGFYGHGAIDEREYRVLYHTARPGCRYWVFSLSFFPDQPPRDIGRPADLEAVRA 300
HDDHVIVGFYGHGAIDEREYRVLYHTARPGCRYWVFSLSFFPDQPPRDIGRPADLEAVRA
Sbjct: 241 HDDHVIVGFYGHGAIDEREYRVLYHTARPGCRYWVFSLSFFPDQPPRDIGRPADLEAVRA 300
Query: 301 VLAEGISPSYEMPPVAIAHRLHWRAQAASLNVLVFDTVAESFGWIPPPNQQEGNQMIPVE 360
VLAEGISPSYEMPPVAIAHRLHWRAQAASLNVLVFDTVAESFGWIPPPNQQEGNQMIPVE
Sbjct: 301 VLAEGISPSYEMPPVAIAHRLHWRAQAASLNVLVFDTVAESFGWIPPPNQQEGNQMIPVE 360
Query: 361 GDQLLEINGRLAMTLVSQTTVDVWVLQEGEAWEHHYQISLPVDLLNVFGGYDDEGFVSAA 420
GDQLLEINGRLAMTLVSQTTVDVWVLQEGEAWEHHYQISLPVDLLNVFGGYDDEGFVSAA
Sbjct: 361 GDQLLEINGRLAMTLVSQTTVDVWVLQEGEAWEHHYQISLPVDLLNVFGGYDDEGFVSAA 420
Query: 421 VFAVSQERNVLAQCPAMMLQCDTEGNVLMFYSLAGHLTVLSRYMLQESLLAHAFLPMRQE 480
VFAVSQERNVLAQCPAMMLQCDTEGNVLMFYSLAGHLTVLSRYMLQESLLAHAFLPMRQE
Sbjct: 421 VFAVSQERNVLAQCPAMMLQCDTEGNVLMFYSLAGHLTVLSRYMLQESLLAHAFLPMRQE 480
Query: 481 DAIDGDPPFFQGP 493
DAIDGDPPFFQGP
Sbjct: 481 DAIDGDPPFFQGP 493
>Os12g0128000 Cyclin-like F-box domain containing protein
Length = 399
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 194/404 (48%), Gaps = 29/404 (7%)
Query: 98 RAPRELRRVEVDALHQVLLRMPAAEVARCSGVCRRLRDLIATDSFRRGHQRHRSRHPMPL 157
R P + + + + ++LL +P + +C VC+ RD+ + +F H HR + P L
Sbjct: 15 RRPLTIASLPEEIMSEILLLLPPKSILQCRAVCKAWRDVTSDRAFLLTH--HRRQPPQRL 72
Query: 158 FFYRLDHWAFPDRVRVH---LRAVDVAARETHPVICFSHADADLRSADPRVFTIEGSCDG 214
+ D + D + + + AVD + + F+ D D S + FT+ SCDG
Sbjct: 73 LTFIRDVGSHHDDLDILDYCVEAVDFRTHQFQSLARFTGQDYDC-SLEDSPFTVHASCDG 131
Query: 215 ILLLSYHTRLYACNPSTRRWRRL-PPLHDDHVIVGFYGHGAIDEREYRVLYHTARPGCRY 273
+LL+SY+ L+ CNP+TR+W + PP +VG Y HG EYRVLY+ R
Sbjct: 132 LLLMSYNNYLHLCNPTTRQWLWVSPPALQHDKVVGLYAHG--HPSEYRVLYYREFGLGR- 188
Query: 274 WVFSLSFFPDQPPRDIGRPADLEAVRAVLAEGISPSYEMPPVAIAHRLHWRAQAASLN-V 332
F ++ + R I + E++R L +G + P LHW Q+ N +
Sbjct: 189 -TFYITTVGSRKERRIWPHSSSESLRKWLTKGTEDTEFNKPFLFHGNLHWLPQSGRQNKI 247
Query: 333 LVFDTVAESFGWIPPPNQQEGNQMIPVEGDQLLEINGRLAM--TLVSQTTVDVWVLQEGE 390
+VFDT+ E+F W+ P + LLEI G LAM + + + VD+W+LQ+ +
Sbjct: 248 VVFDTLDEAFRWLHVPFKMHN-------VSSLLEIEGSLAMSNSHIGSSKVDLWLLQDYK 300
Query: 391 --AWEHHYQISLPVDLLNVFGGYDDEGFVSAAVFAVSQERNVLAQCPAMMLQCDTEGNVL 448
W H Y+I LPV + DD F+ VSQE +VL D +GN+L
Sbjct: 301 HMVWVHKYRIELPVIEIRRLVE-DDVWFLH----IVSQEGDVLVDGSYWQFHYDMKGNLL 355
Query: 449 MFYSLAGHLTVLSRYMLQESLLAHAFLPMRQEDAIDGDPPFFQG 492
+ +G + ++ ++LQESL+ H + ++ P FF+G
Sbjct: 356 EKFQCSGRMLNITPHILQESLVPHEVFQILDNESRHA-PHFFRG 398
>Os10g0391200 Cyclin-like F-box domain containing protein
Length = 492
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 127/375 (33%), Positives = 180/375 (48%), Gaps = 41/375 (10%)
Query: 111 LHQVLLRMPAAEVARCSGVCRRLRDLIATDSFRRGHQRHRSRHPMPLFFYRLDHWAFPDR 170
L ++L+R+PA V RC VC R L + +F R H HR R +PL ++R DR
Sbjct: 151 LCEILVRLPARSVLRCRAVCTAWRRLTSDPAFLRAHH-HRQRD-LPLIYFRR---GGSDR 205
Query: 171 VRVHLRAVDVAARETHPVICFSHADADLRSADPRVFTIEGSCDGILLLSYHTRLYACNPS 230
V A+D+ A + PV+ H + P +T+ SCDG+LLLS R Y CNP+
Sbjct: 206 VG----AIDLHAAQLRPVV--DH------TWPPLGYTVIASCDGLLLLS-SGRFYICNPA 252
Query: 231 TRRWRRLPPLHDDHVIVGFYGHGAIDEREYRVLYHT--ARPGCRYWVFSLSFFPDQPPRD 288
T W +P L D + G Y H EYRVLY C Y + +L PR
Sbjct: 253 TNHWAEIPQLVDADFL-GLYPHNP--SGEYRVLYGEFHGEEECVYHILTLG---SDEPRC 306
Query: 289 IGRPADLEAVRAVLA-EGISPSYEMPPVAIAHRLHW--RAQAASLNVLVFDTVAESFGWI 345
I E V LA E + + V + LHW R + ++VFDT +ESF W+
Sbjct: 307 ITMTMGSETVEQPLAREFLMHARGDRSVLVRGNLHWYLRHRDGGCKIMVFDTASESFQWM 366
Query: 346 PPPNQQEGNQMIPVEGDQLLEINGRLAMTLVSQTT-VDVWVLQEGE--AWEHHYQISLPV 402
P IP LLE++ L + V TT +D+WVLQ+ E W ++I LP+
Sbjct: 367 RHPA-------IP-GWVSLLEMDSTLVFSAVECTTRIDLWVLQDYERSTWACKHRIELPM 418
Query: 403 DLLNVFGGYDDEGFVSAAVFAVSQERNVLAQCPAMMLQCDTEGNVLMFYSLAGHLTVLSR 462
+ F + E +A+ VS E +VL +C +L CD +GNVL + G L +
Sbjct: 419 AQIRQFPECNLEHLGWSAM-VVSVEGDVLVRCSNRILHCDRKGNVLASFQFDGQLPMNCL 477
Query: 463 YMLQESLLAHAFLPM 477
+ L+E+L+ H F M
Sbjct: 478 HRLKENLVVHPFFQM 492
>Os04g0195100 Cyclin-like F-box domain containing protein
Length = 382
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 179/412 (43%), Gaps = 44/412 (10%)
Query: 89 RDLPNVAGIRAPRELRRVEVDALHQVLLRMPAAEVARCSGVCRRLRDLIATDSFRRGHQR 148
R L AG P EL + ++L R+PA + RC VCR R L + F H R
Sbjct: 6 RLLSAAAGPVLPDEL-------VWEILARLPARGLLRCHAVCRDWRRLATSADFLLAHHR 58
Query: 149 HRSRHPMPLFF----YRLDHWAFPDRVRVHLRAVDVAARETHPVICFSHADADLRSADPR 204
H+ P PL F +R A D + + A E V+ FS D R
Sbjct: 59 HQP--PRPLVFGCARWRSGAAADADAAVDSVDLIRHPA-ERRRVLGFS----DYRQHQS- 110
Query: 205 VFTIEGSCDGILLLSYHTRLYACNPSTRRWRRLPPLHDDHVIVGFYGHGAIDEREYRVLY 264
F I SCDG+LL Y CNP+TR+ +P L V Y H + + EYRVL
Sbjct: 111 -FKIHSSCDGLLLFVSGRAFYICNPATRQVTPVPALTGGGSQVTLYPHPSSGDGEYRVLK 169
Query: 265 HTARPGCRYWVFSLSFFPDQPPRDIGRP-ADLEAVRAVLAEGISPSYEMPPVAIAHRLHW 323
V L+ + PR IG P A L V + G +PPV + LHW
Sbjct: 170 WKYPDA----VCILAVGSSEKPRRIGLPEAFLPPVFWIDEIGF-----LPPVLLHGCLHW 220
Query: 324 RAQAASLNVLVFDTVAESFGWIPPPNQQEGNQMIPVEGDQLLEIN-GRLAMTLVSQTTVD 382
+ +LVFDTVAESF W+ PN + G L+EI+ G L + +V+Q
Sbjct: 221 HLRKPEDAILVFDTVAESFRWMVSPN-------VDGYGAHLVEIDGGMLGIGIVTQGMAK 273
Query: 383 VWVLQ--EGEAWEHHYQISLPVDLLNVFGGYDDEGFVSAAVFAVSQERNVLAQCPAMMLQ 440
+WVLQ E E W Y + LPV + EGF S + E V Q +
Sbjct: 274 LWVLQDYETEVWSLRYHVKLPVARMRSIA---REGFFSWKIVCHRGEILVYIQSSVFLFL 330
Query: 441 CDTEGNVLMFYSLAGHLTVLSRYMLQESLLAHAFLPMRQEDAIDGDPPFFQG 492
CDT+GN+ L L R+ L+ESL+ HAF R A G P FF G
Sbjct: 331 CDTKGNLREKIHLDNMLPCAMRHCLKESLVNHAFFG-RHGGAHVGQPQFFCG 381
>Os11g0131300
Length = 389
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 178/376 (47%), Gaps = 29/376 (7%)
Query: 119 PAAEVARCSGVCRRLRDLIATDSFRRGHQRHRSRHPMPLFFYRLDHWAFPDRVRVH---L 175
P + +C VC+ RD+ + +F H H + P L + D + D + + +
Sbjct: 31 PPKSILQCRAVCKVWRDVTSDRAFLLPH--HCRQPPQRLLTFIRDVGSRHDDLDILDYCV 88
Query: 176 RAVDVAARETHPVICFSHADADLRSADPRVFTIEGSCDGILLLSYHTRLYACNPSTRRWR 235
AVD + + F+ D D S + FT+ SCDG+LL+SY+ L+ CNP+TR+W
Sbjct: 89 EAVDFRTHQFQSLARFTGQDYDC-SLEDSPFTVHASCDGLLLMSYNNYLHLCNPTTRQWL 147
Query: 236 RL-PPLHDDHVIVGFYGHGAIDEREYRVLYHTARPGCRYWVFSLSFFPDQPPRDIGRPAD 294
+ PP ++G Y HG EYRVLY+ R F +S R I +
Sbjct: 148 WVFPPALQHDTVLGLYSHG--HSSEYRVLYY--REIGLGPEFYISIVGSGKERSIWPHSS 203
Query: 295 LEAVRAVLAEGISPSYEMPPVAIAHRLHWRAQAASLN-VLVFDTVAESFGWIPPPNQQEG 353
++R LA+G + P LHW N ++VFDT+ E F W+ P +
Sbjct: 204 SASLRKWLAKGKEETQFNEPFLFHGNLHWLPHLGGQNKIVVFDTLDEVFRWLHVPFKMHN 263
Query: 354 NQMIPVEGDQLLEINGRLAM--TLVSQTTVDVWVLQEGE--AWEHHYQISLPVDLLNVFG 409
LLEI G LAM + + + VD+W+LQ+ + W H Y+I LPV + F
Sbjct: 264 M-------SSLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVWVHKYRIELPVIEIRRFE 316
Query: 410 GYDDEGFVSAAVFAVSQERNVLAQCPAMMLQCDTEGNVLMFYSLAGHLTVLSRYMLQESL 469
+D+G+ + VSQE +VL D +GN+L + +G + ++ ++LQESL
Sbjct: 317 --EDDGWY---LHIVSQEGDVLVDGFDWQFHYDIKGNLLEKFQCSGRMLNITPHILQESL 371
Query: 470 LAHAFLPMRQEDAIDG 485
+ H P Q D I G
Sbjct: 372 VPHE-EPSYQLDVIYG 386
>Os04g0193300 Cyclin-like F-box domain containing protein
Length = 405
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 177/404 (43%), Gaps = 54/404 (13%)
Query: 100 PRELRRVEVDALHQVLLRMPAAEVARCSGVCRRLRDLIATDSFRRGHQRHRSRHPMPLFF 159
PR E + ++L+R+P + RC VCR R L +T F H RH+ P+
Sbjct: 38 PRRRGLPEEIVVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLTHHRHQPTLPL---- 93
Query: 160 YRLDHWAFPDRVRVHLRAVD--VAARETHPVICFSHADADLRSADPRVFTIEGSCDGILL 217
+D + + + + ++D AA PV + SAD SCDG+LL
Sbjct: 94 --VDRYKCNEEFLLGIVSLDRRAAAARLQPVAQLDDT-CYMMSAD-------ASCDGLLL 143
Query: 218 LSYH-TRLYACNPSTRRWRRLPPLHDDHVIVGFYGHGAIDEREYRVLYHTAR-------- 268
LS + CNP TR++ L L +++GFY H + YR+L + +
Sbjct: 144 LSIGGIWWFICNPITRQFGALHLLCG-FMVMGFYKHPPTGD--YRLLLYRNQELMSEHLI 200
Query: 269 PGCRYWVFSLSFFPDQPPRDIGRPADLEAVRAVLAEGISPSYEMPPVAIAHRLHWRAQAA 328
PG R + + PR IG P S V + LHW ++
Sbjct: 201 PGDRNTCYVYTLGSSDVPRCIGWP--------------ETSASGATVVLHCSLHWYQRSQ 246
Query: 329 SLNVLVFDTVAESFGWIPPPNQQEGNQMIPVEGDQLLEINGRLAMTLVSQ--TTVDVWVL 386
+ +LVFDT AESF W+ P+ + ++ L +++G+L M + T VD+WVL
Sbjct: 247 DM-ILVFDTTAESFRWMRAPSDR---MKCTLDSGNLFDMDGKLGMYCSNDGCTIVDIWVL 302
Query: 387 QE--GEAWEHHYQISLPV-DLLNVFGGYDDEGFVSAAVFAVSQERNVLAQCPAMMLQCDT 443
Q+ E W YQ+ LPV ++ + GG SA V + + VL C + DT
Sbjct: 303 QDYKREIWSLKYQVELPVPEIRGMLGG---AYHWSAMVLSQEGDVLVLVSCDRWLFYIDT 359
Query: 444 EGNVLMFYSLAGHLTVLSRYMLQESLLAHAFLPMRQEDAIDGDP 487
EGN+L + G L+ SL+ HAF P+ A++ P
Sbjct: 360 EGNLLASFQHYGDGLFTIGLKLKPSLVQHAFFPLLDSYAVNASP 403
>Os10g0124500 Cyclin-like F-box domain containing protein
Length = 457
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 179/401 (44%), Gaps = 62/401 (15%)
Query: 94 VAGIRAPRELRRVEVDALHQVLLRMPAAEVARCSGVCRRLRDLIATDSFRRGHQRHRSRH 153
VAG+ P E++ ++LLR+PA V C VCR R + +T +F H R +
Sbjct: 94 VAGLPIPEEIQ-------EEILLRLPANSVLHCRAVCRSWRHIASTHAFLLRHHRRQPEF 146
Query: 154 PMPLFFYR---LDHWAFPDRVRVHLRAVDVAARETHPVICFSHADADLRSADPRVFTIEG 210
P+ F D W P+ L A+ + + E P+ F F I
Sbjct: 147 PLVTSFRNPAPADQW-MPN----CLDAILLRSAERRPIFSFPRPFCG-------GFPITA 194
Query: 211 SCDGILLLSYHTRLYACNPSTRRWRRLPPLHDDHVIVGFYGHGAIDEREYRVLYHTAR-- 268
SCDG+L++ Y CNP+TR+ + D+ IVG Y H EYRVLY +
Sbjct: 195 SCDGLLIVGG----YICNPTTRQRAPISRWTIDN-IVGLYRHEP--SGEYRVLYFASSDT 247
Query: 269 ------PGCRYWVFSLSFFPDQPPRDIGRPADLEAVRAVLAEGISPSYEMPPVAIAHR-- 320
P C Y V ++ PR I P + + + P PV I
Sbjct: 248 PSEVYCPIC-YCVLAVG---SNKPRQI--PCSVTPMDEEIIGAPGPMIFGRPVLIHGNLH 301
Query: 321 LHWRAQAASL--NVLVFDTVAESFGWIPPPNQQEGNQMIPVEGDQLLEINGRLAMTLVSQ 378
LHW+ + + +LVF+TVAESF + PP N +LL ++G LAM++ +
Sbjct: 302 LHWKKRRGTRYNRILVFNTVAESFRQLRPPAVNPRNYT------RLLAMDGMLAMSVSKE 355
Query: 379 TTVDVWVLQ----EGEAWEHHYQISLPVDLLNVFGGYDDEGFVSAAVFAVSQERNVLAQC 434
+D+ + + E W Y+I LP + F D+G A V VS+E ++L C
Sbjct: 356 RVMDMSIFMLEDYDHEVWVFRYKIKLPTMEIRRF---QDQGDWWAEV--VSEEGDILVSC 410
Query: 435 PAMMLQCDTEGNVLMFYSLAGHLTVLSRYMLQESLLAHAFL 475
+L CD +GN++ + L +S + ++ESL+ HAF
Sbjct: 411 FGWLLHCDNKGNLVSKFQYNDDLPAISPHRIKESLIQHAFF 451
>Os04g0191800 Cyclin-like F-box domain containing protein
Length = 400
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 195/424 (45%), Gaps = 52/424 (12%)
Query: 89 RDLPNVA-GIRAPRELRRVEVDALHQVLLRMPAAEVARCSGVCRRLRDLIATDSFRRGHQ 147
R LP V+ G+ P EL + ++L+R+P + RC VCR R L +T F H
Sbjct: 7 RGLPPVSPGLPLPEEL------VVWEILVRLPPKPLLRCRLVCRAWRRLTSTRDFLLAHH 60
Query: 148 RHRSRHPMPLFFYRLDHWAFPDRVRVHLRAVDVAARETHPVICFSHADADLRSADPRVFT 207
RH+ P+ D D + + L AA HPV ++ +AD
Sbjct: 61 RHQPSLPLIAACDYADIMYLIDVLTLTLGRRRGAAARLHPVARYAS------TAD----Y 110
Query: 208 IEGSCDGILLLSYHT---RLYACNPSTRRWRRLPPLHDDHVIVGFYGHGAIDEREYRVLY 264
++ SCDG+LL+S +T + CNP+TR++ LP L + +G Y H + YR+L
Sbjct: 111 LDSSCDGLLLISRNTGPPQYSICNPTTRQFGDLP-LISGFMFLGLYQHSPTGD--YRILL 167
Query: 265 HTAR--------PGC--RYWVFSLSFFPDQPPRDIGRPADLEAVRAVLAEGISPSYEMPP 314
+ A PG R + + + PR IG ++ A + P+
Sbjct: 168 YRAEKVVLEDLIPGHVERDASYVYTLGSNDMPRRIGWAEPEVSMLAGHSRRCRPAQLHGS 227
Query: 315 VAIAHRLHWRAQAASLNVLVFDTVAESFGWIPPPNQQEGNQMIPVEGDQLLEINGRLAMT 374
+ LHW + +LVFDT AESF W+ P + N++ +LE++ L +
Sbjct: 228 L-----LHWYHSIKHM-ILVFDTTAESFRWMRAPIDKTENELNRELWADVLEMDSTLGLY 281
Query: 375 LVS--QTTVDVWVLQ--EGEAWEHHYQISLPVDLLNVFGGYDDEGFVSAAVFAVSQERN- 429
+ +T V++W LQ E E W YQ+ LPV + G D G S +V S++ +
Sbjct: 282 CCNHDKTIVNIWALQDYEQEVWSIKYQVELPVTCIR---GELDVGD-SWSVMVSSEDGDE 337
Query: 430 ---VLAQCPAMMLQCDTEGNVLMFYSLAGHLTVLSRYMLQESLLAHAFLPMRQEDAIDGD 486
VL C +L DT+G +L G+ +++R L++SL+ HAF P+ + ++ D
Sbjct: 338 VVVVLVDCGQSVLCFDTDGKLLARLEHDGNDIMVTRMKLKQSLVPHAFFPLLKSYVVN-D 396
Query: 487 PPFF 490
PF
Sbjct: 397 LPFI 400
>Os04g0194000 Cyclin-like F-box domain containing protein
Length = 370
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 179/400 (44%), Gaps = 52/400 (13%)
Query: 100 PRELRRVEVDALHQVLLRMPAAEVARCSGVCRRLRDLIATDSFRRGHQRHRSRHPMPLFF 159
PR E + ++L+R+P + RC VCR R L +T F H RH+ P+ +
Sbjct: 9 PRRRGLPEELVVWEILVRLPPKPLLRCRLVCRAWRRLTSTRGFLLAHHRHQPSLPL-VVG 67
Query: 160 YRLDHWAFPDRVRVHLRAVDVAARETHPVICFSHADADLRSADPRVFTIEGSCDGILLLS 219
Y D + D + + R D A HPV+ +A + SCDGIL+L+
Sbjct: 68 YGCDGGSLLDILTLDRR--DAARPRLHPVVRLKNA----------AHFVSASCDGILILN 115
Query: 220 YHT--RLY--ACNPSTRRWRRLPPLHDDHVIVGFYGHGAIDEREYR-VLYHTARPGC--- 271
Y CNP+TR++ LP L ++GFY H EYR +LY+ RP
Sbjct: 116 MTNCGEFYYSVCNPTTRQFADLPML-TGFFVMGFYQHRPTG--EYRLLLYYQFRPEGSED 172
Query: 272 RYWVFSLSFFPDQPPRDIGRPADLEAVRAVLAEGISPSYEMPPVAIAHRLHWRAQAASLN 331
RY + + + PR IG ++ AV V + LHW
Sbjct: 173 RYACYVYTLGSSEMPRCIGWMEEVATCTAV-------------VLLHGSLHWYNYKTD-K 218
Query: 332 VLVFDTVAESFGWIPPPNQQEGNQMIPVEGDQLLEINGRLAMTLVSQ--TTVDVWVLQ-- 387
+L+F+T +ESF W + ++ ++M G+ L EI+G L + + T VD+WVLQ
Sbjct: 219 ILIFNTASESF-W----SMRQADKM---NGNDLFEIDGTLGIYFCNDDATIVDIWVLQDY 270
Query: 388 EGEAWEHHYQISLPVDLLNVFGGYDDEGFVSAAVFAVSQERNVLAQCPAMMLQCDTEGNV 447
+ E W ++I LPV ++ G DD SA V + + VL +L T+G +
Sbjct: 271 KTEFWSLKHRIELPVP--DIKGKLDDGDDWSAMVLSEDGDVLVLVYYRQWLLYIGTDGKL 328
Query: 448 LMFYSLAGHLTVLSRYMLQESLLAHAFLPMRQEDAIDGDP 487
L + + L++SL+ HAF P+ + ++ P
Sbjct: 329 LASFQHDVGCHYNTPLKLKQSLVPHAFFPLLKGYVVNARP 368
>Os02g0132900
Length = 379
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 124/304 (40%), Gaps = 37/304 (12%)
Query: 109 DALHQVLLRMPAAEVARCSGVCRRLRDLIATDSFRRGHQRHRSRHPMPLFFYRLDHWAFP 168
D + ++LLR+PA V R VCR R + S RR Q + P ++ P
Sbjct: 4 DVVSEILLRLPAKAVLRSRAVCRTWRRITTAYSRRRPLQLLGNTDP--------SYYFTP 55
Query: 169 DRVRVHLRAVDVAARETHPVICFSHADADLRSADPRVFTIEGSCDGILLLSYHTR--LYA 226
L A V + I L D +E +CDG LL + +
Sbjct: 56 FNTLTSLPATAVPRIDDGGDIAGCRR---LLHRDRFCLGLEATCDGFLLFRRVQKGSMLI 112
Query: 227 CNPSTRRWRRLPPL--------HDDHV-IVGFYGHGAIDEREYRVLYHTARPGCRYWVFS 277
CNP+TR+ LPP+ +D+ + +GFY H EYRVL H RP
Sbjct: 113 CNPATRQLVNLPPVSPEPSSRPNDNELRALGFYFHRP--SGEYRVLCH--RPLLDVDATY 168
Query: 278 LSFFPDQPPRDIGRPADLEAVRAVLAEGISPSYEMPPVAIAHRLHWRAQAASLNVLVFDT 337
+ PR +G D V+ E I + H + + Q +S FDT
Sbjct: 169 ILSTGAAEPRRLGGGPDYHRCTMVVGETIGDTVYWCRPRYLH--NGKPQISS-----FDT 221
Query: 338 VAESFGWIPPPNQQEGNQMIPVEGDQLLEINGRLAMTLVSQTTVDVWVLQEGEAWEHHYQ 397
V+E+F +PPP E ++++ G A+ +++ +DVW L+E E W +
Sbjct: 222 VSEAFRLLPPPPVSLAKD----ELVAMIDMRGTPAVWTMTELHLDVWALEEEERWVRRLR 277
Query: 398 ISLP 401
+ +P
Sbjct: 278 VGMP 281
>Os05g0128600 Conserved hypothetical protein
Length = 275
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 33/41 (80%)
Query: 152 RHPMPLFFYRLDHWAFPDRVRVHLRAVDVAARETHPVICFS 192
RHPM LF YRLDHWA+PDRV VHLR VD+AARETHP S
Sbjct: 152 RHPMSLFLYRLDHWAYPDRVCVHLRGVDIAARETHPPTRLS 192
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.139 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,775,944
Number of extensions: 738209
Number of successful extensions: 2357
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 2323
Number of HSP's successfully gapped: 12
Length of query: 493
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 388
Effective length of database: 11,553,331
Effective search space: 4482692428
Effective search space used: 4482692428
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 158 (65.5 bits)