BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0503500 Os02g0503500|J100063K09
(114 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0503500 Similar to 3-oxoacyl-[acyl-carrier-protein] re... 226 3e-60
Os04g0376300 Similar to 3-oxoacyl-[acyl-carrier-protein] re... 178 1e-45
Os12g0242700 Similar to 3-oxoacyl-[acyl-carrier-protein] re... 163 2e-41
Os11g0438700 Similar to Tropinone reductase-I (EC 1.1.1.206... 94 3e-20
Os11g0443700 Similar to Short chain alcohol dehydrogenase-like 87 2e-18
Os01g0930900 Similar to Short chain alcohol dehydrogenase-like 84 2e-17
Os03g0268900 Similar to Short chain alcohol dehydrogenase-like 83 4e-17
AK119939 81 1e-16
Os11g0654400 Similar to Short chain alcohol dehydrogenase-like 80 3e-16
Os11g0652900 Similar to Short chain alcohol dehydrogenase-like 80 3e-16
Os01g0931000 Glucose/ribitol dehydrogenase family protein 78 1e-15
Os04g0293800 76 5e-15
Os05g0140800 Similar to Dormancy related protein (Fragment) 73 6e-14
Os07g0170033 Glucose/ribitol dehydrogenase family protein 67 4e-12
Os07g0561500 Glucose/ribitol dehydrogenase family protein 67 4e-12
Os06g0185100 Glucose/ribitol dehydrogenase family protein 65 2e-11
Os08g0510400 Glucose/ribitol dehydrogenase family protein 64 2e-11
>Os02g0503500 Similar to 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplast
precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier
protein reductase)
Length = 114
Score = 226 bits (576), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/114 (100%), Positives = 114/114 (100%)
Query: 1 GRVINIASVVGLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDMTS 60
GRVINIASVVGLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDMTS
Sbjct: 1 GRVINIASVVGLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDMTS 60
Query: 61 QLGEEIEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGGMVM 114
QLGEEIEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGGMVM
Sbjct: 61 QLGEEIEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGGMVM 114
>Os04g0376300 Similar to 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplast
precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier
protein reductase)
Length = 149
Score = 178 bits (451), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/108 (79%), Positives = 98/108 (90%)
Query: 7 ASVVGLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDMTSQLGEEI 66
ASVVGL GN+GQ NY+AAKA VIGLTKT ARE+ASRNI VNA+APGFI+SDMT++LGE++
Sbjct: 42 ASVVGLVGNIGQANYSAAKAGVIGLTKTVAREYASRNINVNAIAPGFIASDMTAELGEDL 101
Query: 67 EKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGGMVM 114
EKK L TIPLGRYG+PEEVA LVEFLAL+P +YITGQVLTIDGGMVM
Sbjct: 102 EKKILSTIPLGRYGKPEEVAGLVEFLALNPAANYITGQVLTIDGGMVM 149
>Os12g0242700 Similar to 3-oxoacyl-[acyl-carrier-protein] reductase 1,
chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl
carrier protein reductase 1) (Beta- keto acyl-carrier
protein reductase 1)
Length = 304
Score = 163 bits (413), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 75/112 (66%), Positives = 94/112 (83%)
Query: 1 GRVINIASVVGLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDMTS 60
GR+INI SV G+ GN+GQ NY AAKA VIGLTK ARE+ SRNI VNAVAPG+++S+MT+
Sbjct: 191 GRIINITSVSGIIGNIGQANYCAAKAGVIGLTKAMAREYGSRNINVNAVAPGWVTSNMTA 250
Query: 61 QLGEEIEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGGM 112
+LG+ +E+K L TIPLGR+G+PEE+A LVEFLA+ P SYITGQVL +DGG+
Sbjct: 251 KLGDNVEQKALETIPLGRFGKPEEIAGLVEFLAVHPAASYITGQVLPVDGGL 302
>Os11g0438700 Similar to Tropinone reductase-I (EC 1.1.1.206) (TR-I) (Tropine
dehydrogenase)
Length = 264
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
Query: 1 GRVINIASVVGLTG--NLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDM 58
G +INI+S+ + +L Y+AAK A+ +T+ A E+A+ I VN VAPGFI + +
Sbjct: 147 GCIINISSIASVVAFCSLPNAVYSAAKGAMNQVTRNLAAEWANDGIRVNCVAPGFIRTPL 206
Query: 59 TSQL--GEEIEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGGMVM 114
S+ G E+ + +P+GR GEPE++A LV FL++ P SYITGQV+ DGG +
Sbjct: 207 LSEFVEGNELGRAEFSRVPMGRLGEPEDIASLVAFLSM-PASSYITGQVICADGGRCL 263
>Os11g0443700 Similar to Short chain alcohol dehydrogenase-like
Length = 260
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 72/116 (62%), Gaps = 3/116 (2%)
Query: 1 GRVINIASVVGLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDMTS 60
G ++NI+SV + Y+AAK A+ +T+ A E+AS I VN+VAPG+I + + +
Sbjct: 145 GSIVNISSVASVLAFHSLPIYSAAKGAMNQVTRNLACEWASDGIRVNSVAPGYIQTPLLT 204
Query: 61 QL--GEEIEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGGMVM 114
G + + +PLGR G+PE+++ LV FL + P SYITGQ++ +DGG ++
Sbjct: 205 AFVAGNDFAQVEFNRLPLGRLGKPEDISSLVAFLCM-PAASYITGQIICVDGGRML 259
>Os01g0930900 Similar to Short chain alcohol dehydrogenase-like
Length = 281
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 3 VINIASVVGLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDMTSQL 62
V+NI+SV G Y+A K A+ LT++ A E+A I VN VAPG + +D+
Sbjct: 161 VVNISSVAGFIAYPALSVYSATKGAMNQLTRSLAAEWARDGIRVNCVAPGGVRTDIAGSS 220
Query: 63 G--------EEIEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGG 111
G +E++ + +GR GEPEEVA LV FL + P YITGQV+ +DGG
Sbjct: 221 GVALEPGAARAMEEREAARVVMGRIGEPEEVASLVAFLCM-PAAPYITGQVICVDGG 276
>Os03g0268900 Similar to Short chain alcohol dehydrogenase-like
Length = 270
Score = 83.2 bits (204), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 1 GRVINIASVVGLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDMTS 60
G ++ I+SV G+ YA K A+ LTK A E+A NI N VAPG+I + ++
Sbjct: 150 GSIVFISSVAGIVALFSGTIYAMTKGAMNQLTKNLACEWAKDNIRTNCVAPGYILTSLSE 209
Query: 61 QL--GEEIEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGGMVM 114
+ +E E PL R GEP E++ LV FL + PG +YITGQ + +DGGM +
Sbjct: 210 GILANKEFEGSVKSRTPLRRVGEPAEISSLVAFLCM-PGSTYITGQTIAVDGGMTV 264
>AK119939
Length = 310
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 68/125 (54%), Gaps = 15/125 (12%)
Query: 1 GRVINIASVV-GLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDMT 59
GR+I ++S+ GL G Y A+K AVIG+ K A +F R ITVN VAPG I SDM
Sbjct: 184 GRLILMSSIAAGLLGVRDHALYNASKMAVIGMIKAFATDFGRRGITVNGVAPGGIKSDMF 243
Query: 60 SQLGEE-------------IEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVL 106
+Q IEK PLGR PE+VA +V FL+ GG ++ GQV+
Sbjct: 244 TQNAWHYIPGGTPDIPAATIEKMMADHCPLGRCATPEDVARVVGFLSSEDGG-WVNGQVI 302
Query: 107 TIDGG 111
TI GG
Sbjct: 303 TISGG 307
>Os11g0654400 Similar to Short chain alcohol dehydrogenase-like
Length = 268
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 3 VINIASVVGLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDMTSQ- 61
V+NI+SV G G Y+ K + LT++ A E+A I VN VAPG + +D+
Sbjct: 155 VVNISSVAGSVGMPALAVYSMTKGGMNQLTRSLAAEWAGDGIRVNCVAPGGVKTDICQDE 214
Query: 62 -LGEEIEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGG 111
+ E+ K + +P+ R EPEEVA V FL + P SYITGQV+ +DGG
Sbjct: 215 TIDPELIKSEMDRLPMRRLAEPEEVAATVAFLCM-PAASYITGQVVGVDGG 264
>Os11g0652900 Similar to Short chain alcohol dehydrogenase-like
Length = 264
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 3 VINIASVVGLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDMTSQ- 61
V+NI+SV G G Y+ K + LT++ A E+A I VN VAPG + +D+
Sbjct: 151 VVNISSVAGTVGIPALAVYSMTKGGMNQLTRSLAAEWAGDGIRVNCVAPGGVKTDICQDE 210
Query: 62 -LGEEIEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGG 111
+ E+ K + +P+ R EPEEVA V FL + P SYITGQV+ +DGG
Sbjct: 211 TIDPELIKSEMDRLPMRRLAEPEEVAATVAFLCM-PAASYITGQVVGVDGG 260
>Os01g0931000 Glucose/ribitol dehydrogenase family protein
Length = 277
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 3 VINIASVVGLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDMTS-- 60
V+NI+S Y+A K + LT+ A E+A + VNAVAPG +D+
Sbjct: 157 VVNISSTAAFYAAPHLAVYSATKGGMNQLTRCLAAEWARDGVRVNAVAPGATRTDICDTS 216
Query: 61 --QLGEEIEKK-----NLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGGMV 113
LGE+ ++ + +P+ R GEPEEVA V FL + P SYITGQV+ +DGG
Sbjct: 217 GVALGEKTRRRLADAGAMDRVPIRRIGEPEEVAAAVVFLCM-PAASYITGQVICVDGGRT 275
Query: 114 M 114
+
Sbjct: 276 L 276
>Os04g0293800
Length = 152
Score = 75.9 bits (185), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 15/128 (11%)
Query: 1 GRVINIASVVGLTG--NLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDM 58
G ++NI+ + +TG L ++ AK A+ +TK+ A E+AS I VN +APG I + +
Sbjct: 25 GNIVNISGISTVTGFPTLPICVFSTAKGAMNQITKSLAVEWASDKIRVNCIAPGIIDTPL 84
Query: 59 TSQL------------GEEIEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVL 106
+ G + + ++ P+ R G+PEEV+ LV FL + P +YITGQ++
Sbjct: 85 GDDVKSGNNPHLQGVSGTDFIQDDIARTPMRRVGKPEEVSSLVAFLCM-PAAAYITGQII 143
Query: 107 TIDGGMVM 114
+DGG +
Sbjct: 144 CVDGGRTL 151
>Os05g0140800 Similar to Dormancy related protein (Fragment)
Length = 365
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 3 VINIASVVGLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDM-TSQ 61
+IN +S+ GN ++Y A K A++ T+ A + A I VN VAPG I + + +
Sbjct: 252 IINTSSINAYKGNKTLLDYTATKGAIVAFTRALALQLAEEGIRVNGVAPGPIWTPLIPAS 311
Query: 62 LGEEIEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGGMVM 114
EE ++ +P+GR G+P EVA FLA S SY++GQ+L ++GG+++
Sbjct: 312 FAEEKVRQFGSQVPMGRAGQPSEVAPSFVFLA-SDDASYMSGQMLHVNGGVIV 363
>Os07g0170033 Glucose/ribitol dehydrogenase family protein
Length = 265
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 1 GRVINIASVVGLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDM-T 59
GR++ I S V + G Y A+KAAV + +T A+E IT N VAPG +++DM
Sbjct: 152 GRIVAITSSVVASLPPGYSAYTASKAAVEAMVRTMAKELKGTGITANCVAPGPVATDMFF 211
Query: 60 SQLGEEIEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGGMV 113
+ E K+ + P GR G+P ++A +V FL + + GQV+ ++GG V
Sbjct: 212 AGKDEAWVKRTVDANPTGRLGDPGDIAAMVGFL-CTDAAEWTNGQVIRVNGGYV 264
>Os07g0561500 Glucose/ribitol dehydrogenase family protein
Length = 265
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 10/118 (8%)
Query: 1 GRVINIASVVGLTGNLGQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDM-- 58
GR++ I S V + G Y A+KAAV + +T A+E IT N VAPG ++DM
Sbjct: 153 GRIVAITSSVVGSHPTGYSAYTASKAAVEAMVRTMAKELKGTRITANCVAPGATATDMFF 212
Query: 59 ---TSQLGEEIEKKNLITIPLGRYGEPEEVADLVEFLALSPGGSYITGQVLTIDGGMV 113
+ + +EI+ N P+GR GE ++A +V FL + ++ GQV+ ++GG V
Sbjct: 213 AGKSEERVDEIKATN----PMGRLGEAGDIAPVVGFL-CTDAAEWVNGQVIRVNGGYV 265
>Os06g0185100 Glucose/ribitol dehydrogenase family protein
Length = 283
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 21 YAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDMTSQLGEEIEKKNLIT--IPLGR 78
Y A KAAV +TK A+E A IT N+VAPG +++ M G+ E+ + P+GR
Sbjct: 191 YVATKAAVEAMTKVLAKELAGTGITANSVAPGPVATPMF-YAGKSEERVAAVAGECPMGR 249
Query: 79 YGEPEEVADLVEFLALSPGGSYITGQVLTIDGGMV 113
GEP +VA +V FL G +I GQV+ ++GG +
Sbjct: 250 IGEPMDVAPVVGFLCTDAAG-WINGQVIRVNGGYI 283
>Os08g0510400 Glucose/ribitol dehydrogenase family protein
Length = 284
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 12/122 (9%)
Query: 1 GRVINIASVVGLT-GNL-GQVNYAAAKAAVIGLTKTTAREFASRNITVNAVAPGFISSDM 58
G VINI+SV GL G+L G YAA+K+A+ TK A E + I VN++APG S++
Sbjct: 158 GSVINISSVSGLNRGHLPGSTGYAASKSAMHYATKLMALELGAYGIRVNSIAPGIFKSEI 217
Query: 59 TSQLGEEIEKKNLIT-----IPLGRYGEPEE-VADLVEFLALSPGGSYITGQVLTIDGGM 112
T+ L ++KK L T +PL +G + + LV FL + SY+TG + +D G
Sbjct: 218 TAPL---LQKKWLSTVVSKIVPLKTHGTTDPALTSLVRFL-IHETSSYVTGNIFIVDSGA 273
Query: 113 VM 114
+
Sbjct: 274 TL 275
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.134 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,494,431
Number of extensions: 122631
Number of successful extensions: 354
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 339
Number of HSP's successfully gapped: 20
Length of query: 114
Length of database: 17,035,801
Length adjustment: 81
Effective length of query: 33
Effective length of database: 12,806,467
Effective search space: 422613411
Effective search space used: 422613411
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 149 (62.0 bits)