Os11g0443700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Short chain alcohol dehydrogenase-like.
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Os11g0443700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Short chain alcohol dehydrogenase-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 481.29 | 1.03 | 9.41 | 5.88 | 2.46 | -6.02 | 5.73 | 1.03 | -0.84 | 14.1 | 11.08 | 287 | 12.9 | -- |
| 481.24 | 1.02 | 9.43 | 5.79 | 2.34 | -6.18 | 5.93 | -- | -0.862 | 14.4 | 10.11 | 305 | 12.9 | -- |
| 599.94 | 1.14 | 9.32 | 6.4 | 2.95 | -5.03 | -- | 3.94 | -0.769 | 12.4 | 14.69 | 303 | 13.7 | -- |
| 603.87 | 1.14 | 9.4 | 5.93 | 1.26 | -5.98 | -- | -- | -0.827 | 14.8 | 9.841 | 321 | 11.9 | -- |
| 699.82 | 1.23 | 9.38 | 5.85 | -- | -6.23 | -- | 4.2 | -0.733 | -- | 9.899 | 518 | 13.1 | -- |
| 722.55 | 1.26 | 9.37 | 5.16 | 4.43 | -- | 3.69 | -- | -1.19 | 9.29 | -- | -- | -- | -- |
| 768.63 | 1.3 | 9.37 | 5.28 | 4.44 | -- | -- | -- | -1.19 | 9.09 | -- | -- | -- | -- |
| 612.83 | 1.15 | 9.41 | 5.85 | -- | -5.8 | -- | -- | -0.897 | -- | 8.292 | 389 | 11.5 | -- |
| 1471.86 | 1.79 | 9.57 | -- | 1.06 | -4.18 | -- | -- | -1.65 | 11.8 | -5.647 | 175 | 10.8 | -- |
| 1906.86 | 2.04 | 9.49 | 5.27 | -- | -- | -- | -- | -1.17 | -- | -- | -- | -- | -- |
| 1504.08 | 1.81 | 9.5 | -- | 4.45 | -- | -- | -- | -1.78 | 9 | -- | -- | -- | -- |
| 1470.92 | 1.79 | 9.59 | -- | -- | -5.01 | -- | -- | -1.64 | -- | -11.06 | 287 | 11.1 | -- |
| 2640.1 | 2.4 | 9.62 | -- | -- | -- | -- | -- | -1.75 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 470.20 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 6 | 482.56 | temperature | 10.0 | 270 | > th | dose dependent | sin | 19 | NA |
| 9 | 485.87 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 11 | 9 |
| 30 | 499.06 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 15 |
| 35 | 501.12 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 15 | 3 |
| 55 | 505.08 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 6 |
| 74 | 508.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 12 |
| 83 | 509.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 20 |
| 90 | 511.67 | radiation | 1.0 | 270 | < th | dose independent | sin | 14 | NA |
| 91 | 511.78 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 113 | 514.77 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 8 | 9 |
| 129 | 516.10 | radiation | 1.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 132 | 516.23 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 12 |
| 140 | 517.15 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 207 | 524.78 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 208 | 524.78 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 10 |
| 211 | 524.99 | temperature | 10.0 | 720 | > th | dose dependent | sin | 0 | NA |
| 215 | 525.37 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 219 | 525.86 | temperature | 30.0 | 270 | < th | dose independent | sin | 14 | NA |
| 232 | 526.96 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 14 | 5 |
| 243 | 527.56 | humidity | 70.0 | 270 | > th | dose independent | sin | 13 | NA |
| 245 | 528.11 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 283 | 530.42 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 16 |
| 289 | 530.93 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 292 | 531.15 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 19 |
| 293 | 531.31 | temperature | 30.0 | 720 | < th | dose independent | sin | 7 | NA |
| 294 | 531.32 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 21 |
| 295 | 531.49 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 307 | 531.52 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 405 | 536.76 | temperature | 30.0 | 270 | < th | dose independent | sin | 19 | NA |
| 419 | 537.70 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 11 | 8 |
| 427 | 537.96 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 449 | 538.91 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 462 | 539.39 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 496 | 540.57 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 14 | 18 |
| 601 | 544.92 | temperature | 25.0 | 270 | > th | dose independent | sin | 19 | NA |
| 623 | 545.62 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 12 |
| 625 | 545.68 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 630 | 545.79 | temperature | 20.0 | 10 | > th | dose independent | rect. | 15 | 6 |
| 633 | 546.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 18 |
| 634 | 546.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 659 | 546.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 6 |
| 660 | 546.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 668 | 546.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 670 | 546.66 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 6 |
| 672 | 546.71 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 678 | 546.91 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 696 | 547.45 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 698 | 547.45 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 700 | 547.45 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 701 | 547.45 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 739 | 548.58 | temperature | 30.0 | 720 | < th | dose independent | sin | 9 | NA |
| 742 | 548.72 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 748 | 548.98 | humidity | 90.0 | 10 | < th | dose independent | rect. | 15 | 6 |
| 783 | 550.24 | radiation | 1.0 | 270 | < th | dose independent | rect. | 15 | 12 |
| 797 | 550.75 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 801 | 550.87 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 806 | 550.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 812 | 551.17 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 15 | 11 |
| 827 | 551.43 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 831 | 551.47 | radiation | 30.0 | 10 | < th | dose independent | rect. | 12 | 9 |
| 835 | 551.55 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 8 |
| 868 | 552.54 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 910 | 553.30 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 18 |
| 938 | 553.73 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 18 |