Os04g0376300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase).
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Os04g0376300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.77 | 0.256 | 11.9 | -0.302 | 1.22 | 0.968 | -0.201 | -0.645 | -0.0632 | 18.4 | 25.15 | 14 | -- | -- |
| 29.92 | 0.255 | 11.9 | -0.23 | 1.23 | 0.913 | -0.249 | -- | -0.0444 | 18.4 | 25.11 | 11 | -- | -- |
| 29.86 | 0.255 | 11.9 | -0.307 | 1.22 | 0.963 | -- | -0.713 | -0.0668 | 18.4 | 25.13 | 14 | -- | -- |
| 30.07 | 0.255 | 11.9 | -0.225 | 1.23 | 0.899 | -- | -- | -0.0456 | 18.4 | 25.1 | 11 | -- | -- |
| 72.77 | 0.397 | 11.9 | -0.613 | -- | 1.8 | -- | -1.99 | -0.24 | -- | 24.19 | 281 | -- | -- |
| 42.31 | 0.305 | 11.9 | -0.0871 | 1.47 | -- | 0.075 | -- | 0.026 | 17.6 | -- | -- | -- | -- |
| 42.33 | 0.305 | 11.9 | -0.0875 | 1.47 | -- | -- | -- | 0.0263 | 17.7 | -- | -- | -- | -- |
| 74.93 | 0.403 | 11.9 | -0.404 | -- | 1.67 | -- | -- | -0.163 | -- | 24.4 | 284 | -- | -- |
| 31.35 | 0.261 | 11.9 | -- | 1.25 | 0.845 | -- | -- | -0.0127 | 18.3 | 25.19 | 10 | -- | -- |
| 154.73 | 0.581 | 11.8 | -0.135 | -- | -- | -- | -- | -0.00896 | -- | -- | -- | -- | -- |
| 42.53 | 0.305 | 11.9 | -- | 1.47 | -- | -- | -- | 0.036 | 17.6 | -- | -- | -- | -- |
| 79.11 | 0.414 | 11.9 | -- | -- | 1.61 | -- | -- | -0.113 | -- | 24.4 | 284 | -- | -- |
| 155.21 | 0.582 | 11.8 | -- | -- | -- | -- | -- | 0.00597 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.87 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 4 | 26.13 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 9 |
| 63 | 27.63 | temperature | 10 | 270 | > th | dose dependent | sin | 2 | NA |
| 67 | 27.67 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 4 |
| 75 | 27.74 | temperature | 30 | 270 | < th | dose dependent | sin | 2 | NA |
| 116 | 28.20 | temperature | 15 | 720 | > th | dose dependent | sin | 5 | NA |
| 150 | 28.44 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 170 | 28.62 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 5 |
| 175 | 28.65 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 225 | 28.91 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 12 |
| 248 | 29.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 2 |
| 263 | 29.08 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 16 |
| 284 | 29.14 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 6 |
| 352 | 29.43 | temperature | 25 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 370 | 29.49 | temperature | 25 | 10 | > th | dose dependent | rect. | 16 | 23 |
| 449 | 29.70 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 479 | 29.75 | temperature | 25 | 90 | > th | dose dependent | rect. | 16 | 23 |
| 512 | 29.81 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 542 | 29.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 11 |
| 639 | 30.09 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 710 | 30.21 | temperature | 25 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 927 | 30.72 | temperature | 25 | 270 | > th | dose independent | sin | 2 | NA |