Os11g0654400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Short chain alcohol dehydrogenase-like.
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Os11g0654400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Short chain alcohol dehydrogenase-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.47 | 0.427 | 14.4 | -0.558 | 2.31 | 1.39 | 0.841 | -3.33 | -0.442 | 19.9 | 25 | 754 | -- | -- |
| 88.62 | 0.438 | 14.4 | -0.0872 | 2.67 | 0.892 | 0.669 | -- | -0.413 | 19.9 | 19.69 | 1917 | -- | -- |
| 84.28 | 0.428 | 14.4 | -0.526 | 2.32 | 1.33 | -- | -2.69 | -0.434 | 19.8 | 24.9 | 764 | -- | -- |
| 88.14 | 0.437 | 14.4 | -0.241 | 2.73 | 0.859 | -- | -- | -0.547 | 19.9 | 20.17 | 10531 | -- | -- |
| 268.51 | 0.763 | 14.3 | -0.966 | -- | 3.28 | -- | -3.76 | -0.588 | -- | 24.7 | 614 | -- | -- |
| 109.16 | 0.49 | 14.3 | 0.243 | 2.76 | -- | 0.752 | -- | -0.215 | 19.9 | -- | -- | -- | -- |
| 110.81 | 0.493 | 14.3 | 0.223 | 2.76 | -- | -- | -- | -0.214 | 19.9 | -- | -- | -- | -- |
| 278.53 | 0.777 | 14.3 | -0.378 | -- | 2.93 | -- | -- | -0.526 | -- | 24.4 | 604 | -- | -- |
| 88.61 | 0.438 | 14.4 | -- | 2.73 | 0.839 | -- | -- | -0.498 | 19.7 | 24.99 | 10522 | -- | -- |
| 523.92 | 1.07 | 14.3 | 0.193 | -- | -- | -- | -- | -0.251 | -- | -- | -- | -- | -- |
| 112.12 | 0.495 | 14.3 | -- | 2.76 | -- | -- | -- | -0.239 | 19.9 | -- | -- | -- | -- |
| 282.21 | 0.782 | 14.3 | -- | -- | 2.87 | -- | -- | -0.478 | -- | 24.42 | 602 | -- | -- |
| 524.9 | 1.07 | 14.3 | -- | -- | -- | -- | -- | -0.272 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.47 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 15 |
| 12 | 79.00 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 9 |
| 28 | 79.86 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 13 |
| 41 | 80.61 | temperature | 10.0 | 270 | > th | dose dependent | sin | 17 | NA |
| 42 | 80.74 | temperature | 20.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 87 | 81.98 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 13 |
| 88 | 82.00 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 14 | 22 |
| 91 | 82.02 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 9 | 13 |
| 94 | 82.04 | temperature | 30.0 | 270 | < th | dose dependent | sin | 18 | NA |
| 104 | 82.22 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 9 | 20 |
| 144 | 82.46 | temperature | 25.0 | 720 | > th | dose dependent | sin | 20 | NA |
| 167 | 82.56 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 24 | 22 |
| 192 | 82.67 | temperature | 25.0 | 720 | > th | dose dependent | no | NA | NA |
| 198 | 82.68 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 284 | 83.09 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 9 |
| 287 | 83.12 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 8 | 13 |
| 314 | 83.28 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 380 | 83.73 | temperature | 25.0 | 270 | < th | dose independent | rect. | 16 | 8 |
| 388 | 83.79 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 14 | 7 |
| 396 | 83.84 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 6 |
| 423 | 83.98 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 456 | 84.19 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 457 | 84.19 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 2 |
| 460 | 84.21 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 7 |
| 511 | 84.49 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 548 | 84.63 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 557 | 84.65 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 564 | 84.69 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 588 | 84.79 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 650 | 85.08 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 658 | 85.11 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 17 |
| 668 | 85.17 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 691 | 85.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 15 |
| 728 | 85.43 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 739 | 85.48 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 776 | 85.64 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 822 | 85.81 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 825 | 85.82 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 19 |
| 851 | 85.89 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 21 |
| 913 | 86.04 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 919 | 86.05 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 926 | 86.05 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 15 |