Os11g0652900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Short chain alcohol dehydrogenase-like.
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Os11g0652900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Short chain alcohol dehydrogenase-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 162.75 | 0.599 | 8.9 | -0.633 | 1.42 | 0.697 | -0.386 | 2.79 | -1.17 | 19.7 | 41.97 | 631 | -- | -- |
| 171.57 | 0.61 | 8.92 | -0.802 | 1.47 | 0.829 | 0.0732 | -- | -1.21 | 19.9 | 40 | 539 | -- | -- |
| 163.08 | 0.595 | 8.9 | -0.628 | 1.44 | 0.685 | -- | 2.66 | -1.17 | 19.7 | 42.99 | 624 | -- | -- |
| 171.56 | 0.61 | 8.91 | -0.788 | 1.47 | 0.833 | -- | -- | -1.21 | 19.9 | 40 | 539 | -- | -- |
| 237.47 | 0.718 | 8.89 | -0.668 | -- | 1.56 | -- | 2.58 | -1.3 | -- | 34.23 | 676 | -- | -- |
| 184.47 | 0.637 | 8.9 | -0.74 | 1.8 | -- | 0.535 | -- | -1.14 | 19.3 | -- | -- | -- | -- |
| 185.23 | 0.637 | 8.9 | -0.752 | 1.8 | -- | -- | -- | -1.14 | 19.3 | -- | -- | -- | -- |
| 245.64 | 0.73 | 8.9 | -0.853 | -- | 1.66 | -- | -- | -1.36 | -- | 29.93 | 675 | -- | -- |
| 187.54 | 0.638 | 8.88 | -- | 1.52 | 0.777 | -- | -- | -1.09 | 19.8 | 46.3 | 536 | -- | -- |
| 356.87 | 0.883 | 8.86 | -0.783 | -- | -- | -- | -- | -1.17 | -- | -- | -- | -- | -- |
| 200.12 | 0.662 | 8.88 | -- | 1.81 | -- | -- | -- | -1.06 | 19.3 | -- | -- | -- | -- |
| 264.93 | 0.758 | 8.88 | -- | -- | 1.63 | -- | -- | -1.26 | -- | 33.92 | 675 | -- | -- |
| 373.04 | 0.902 | 8.84 | -- | -- | -- | -- | -- | -1.09 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 158.28 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 15 | 13 |
| 2 | 159.61 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 15 |
| 4 | 160.44 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 44 | 162.40 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 15 | 8 |
| 56 | 162.80 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 58 | 162.88 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 15 | 4 |
| 60 | 162.89 | wind | 1.0 | 720 | < th | dose independent | rect. | 13 | 2 |
| 63 | 162.97 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 10 |
| 65 | 163.05 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 16 | 1 |
| 66 | 163.08 | humidity | 50.0 | 90 | > th | dose independent | rect. | 11 | 14 |
| 67 | 163.13 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 15 | 5 |
| 86 | 163.59 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 88 | 163.61 | radiation | 40.0 | 720 | > th | dose dependent | sin | 11 | NA |
| 92 | 163.65 | temperature | 15.0 | 270 | > th | dose dependent | sin | 17 | NA |
| 102 | 163.76 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 142 | 164.41 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 8 | 4 |
| 161 | 164.43 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 10 | 13 |
| 164 | 164.44 | wind | 1.0 | 30 | > th | dose independent | rect. | 1 | 19 |
| 165 | 164.44 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 15 | 2 |
| 174 | 164.55 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 182 | 164.58 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 197 | 164.68 | temperature | 25.0 | 30 | > th | dose independent | rect. | 15 | 5 |
| 201 | 164.70 | radiation | 10.0 | 10 | < th | dose independent | rect. | 1 | 19 |
| 204 | 164.74 | wind | 7.0 | 30 | < th | dose independent | rect. | 15 | 5 |
| 225 | 164.77 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 8 | 7 |
| 243 | 164.78 | radiation | 40.0 | 720 | > th | dose dependent | no | NA | NA |
| 384 | 164.80 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 419 | 164.89 | radiation | 40.0 | 270 | < th | dose independent | rect. | 19 | 19 |
| 436 | 165.02 | humidity | 90.0 | 90 | < th | dose independent | rect. | 15 | 5 |
| 437 | 165.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 14 |
| 474 | 165.15 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 11 | 14 |
| 484 | 165.19 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 10 |
| 486 | 165.19 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 489 | 165.23 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 507 | 165.35 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 10 |
| 509 | 165.37 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 512 | 165.41 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 19 |
| 528 | 165.50 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 11 | 14 |
| 530 | 165.51 | temperature | 20.0 | 30 | > th | dose independent | rect. | 15 | 17 |
| 531 | 165.52 | radiation | 40.0 | 720 | > th | dose independent | rect. | 13 | 21 |
| 533 | 165.53 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 1 | 19 |
| 535 | 165.53 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 1 | 19 |
| 539 | 165.57 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 10 |
| 540 | 165.57 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 1 | 10 |
| 541 | 165.57 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 1 | 10 |
| 542 | 165.57 | temperature | 10.0 | 90 | > th | dose independent | rect. | 11 | 14 |
| 545 | 165.60 | humidity | 70.0 | 270 | < th | dose independent | rect. | 15 | 1 |
| 567 | 165.72 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 10 |
| 572 | 165.75 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 17 | 6 |
| 576 | 165.79 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 15 | 2 |
| 599 | 165.84 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 15 | 5 |
| 608 | 165.88 | temperature | 20.0 | 30 | > th | dose independent | rect. | 15 | 14 |
| 619 | 165.94 | radiation | 10.0 | 270 | < th | dose dependent | sin | 14 | NA |
| 621 | 165.96 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 649 | 166.16 | radiation | 1.0 | 270 | < th | dose independent | sin | 14 | NA |
| 651 | 166.16 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 695 | 166.24 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 712 | 166.31 | wind | 9.0 | 10 | < th | dose independent | rect. | 1 | 19 |
| 724 | 166.37 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 16 |
| 727 | 166.39 | radiation | 40.0 | 720 | > th | dose independent | sin | 12 | NA |
| 729 | 166.39 | atmosphere | 1005.0 | 720 | > th | dose dependent | rect. | 11 | 4 |
| 731 | 166.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 10 |
| 732 | 166.41 | radiation | 10.0 | 10 | < th | dose independent | rect. | 1 | 22 |
| 734 | 166.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 757 | 166.50 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 10 |
| 813 | 166.60 | humidity | 70.0 | 90 | > th | dose independent | rect. | 19 | 6 |
| 818 | 166.63 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 15 | 5 |
| 820 | 166.63 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 15 | 5 |
| 821 | 166.64 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 833 | 166.68 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 5 |
| 836 | 166.68 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 840 | 166.68 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 5 |
| 846 | 166.68 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 5 |
| 847 | 166.68 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 867 | 166.68 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 19 |
| 870 | 166.68 | radiation | 40.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 877 | 166.70 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 13 |
| 884 | 166.73 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 5 |
| 885 | 166.73 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 5 |
| 886 | 166.73 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 5 |
| 889 | 166.73 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 5 |
| 891 | 166.73 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 5 |
| 897 | 166.73 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 19 |
| 899 | 166.73 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 1 | 19 |
| 901 | 166.73 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 5 |
| 912 | 166.75 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 920 | 166.77 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 1 | 10 |
| 921 | 166.77 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 1 | 10 |
| 925 | 166.79 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 11 | 14 |
| 926 | 166.79 | atmosphere | 1005.0 | 720 | > th | dose dependent | rect. | 13 | 1 |
| 927 | 166.79 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 11 | 14 |
| 930 | 166.81 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 931 | 166.82 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 933 | 166.82 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 20 | 5 |
| 937 | 166.84 | wind | 9.0 | 30 | < th | dose independent | rect. | 20 | 5 |
| 959 | 166.86 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 14 |
| 969 | 166.87 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 972 | 166.88 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 1 | 19 |
| 979 | 166.90 | humidity | 60.0 | 270 | > th | dose independent | rect. | 23 | 10 |
| 987 | 166.92 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 991 | 166.93 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 20 | 5 |