Os11g0438700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tropinone reductase-I (EC 1.1.1.206) (TR-I) (Tropine dehydrogenase).
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Os11g0438700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Tropinone reductase-I (EC 1.1.1.206) (TR-I) (Tropine dehydrogenase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.2 | 0.491 | 9.17 | -0.926 | 0.492 | 1.21 | -1.14 | 1.42 | 0.139 | 2.34 | 20.81 | 919 | -- | -- |
| 114.54 | 0.498 | 9.2 | -1.19 | 0.467 | 1.1 | -0.84 | -- | 0.0836 | 2.56 | 20.87 | 891 | -- | -- |
| 113.76 | 0.497 | 9.17 | -0.914 | 0.475 | 1.2 | -- | 1.25 | 0.136 | 2.17 | 20.9 | 919 | -- | -- |
| 116.9 | 0.504 | 9.2 | -1.2 | 0.484 | 1.09 | -- | -- | 0.0836 | 2.08 | 20.8 | 919 | -- | -- |
| 127.35 | 0.526 | 9.17 | -1 | -- | 1.31 | -- | 1.14 | 0.125 | -- | 20.8 | 943 | -- | -- |
| 148.8 | 0.572 | 9.15 | -0.803 | 0.617 | -- | -0.9 | -- | 0.337 | 1.69 | -- | -- | -- | -- |
| 151.82 | 0.577 | 9.15 | -0.773 | 0.615 | -- | -- | -- | 0.343 | 1.33 | -- | -- | -- | -- |
| 130.63 | 0.532 | 9.21 | -1.23 | -- | 1.21 | -- | -- | 0.0588 | -- | 20.9 | 943 | -- | -- |
| 149.59 | 0.57 | 9.16 | -- | 0.525 | 0.705 | -- | -- | 0.256 | 2.02 | 21.3 | 808 | -- | -- |
| 175.15 | 0.618 | 9.14 | -0.749 | -- | -- | -- | -- | 0.356 | -- | -- | -- | -- | -- |
| 167.57 | 0.606 | 9.13 | -- | 0.602 | -- | -- | -- | 0.429 | 1.28 | -- | -- | -- | -- |
| 163.88 | 0.596 | 9.17 | -- | -- | 0.736 | -- | -- | 0.206 | -- | 22 | 899 | -- | -- |
| 189.95 | 0.643 | 9.12 | -- | -- | -- | -- | -- | 0.439 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.95 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 3 | 107.84 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 7 | 108.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 11 |
| 12 | 108.44 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 7 |
| 30 | 108.91 | temperature | 25 | 720 | < th | dose dependent | sin | 7 | NA |
| 33 | 109.04 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 49 | 109.34 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 7 |
| 73 | 109.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 92 | 110.39 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 141 | 111.12 | temperature | 20 | 720 | > th | dose independent | sin | 5 | NA |
| 175 | 111.66 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 13 |
| 185 | 111.77 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 197 | 111.86 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 15 |
| 314 | 113.21 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 20 |
| 318 | 113.24 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 18 |
| 553 | 115.42 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 677 | 116.41 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 23 |
| 746 | 116.80 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 23 |
| 751 | 116.83 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 773 | 116.99 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 23 |
| 786 | 117.12 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 801 | 117.24 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 23 |
| 814 | 117.34 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 824 | 117.43 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 965 | 118.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |