BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0977100 Os01g0977100|Os01g0977100
(298 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0977100 CD9/CD37/CD63 antigen family protein 478 e-135
Os08g0443800 CD9/CD37/CD63 antigen family protein 171 7e-43
Os05g0126100 CD9/CD37/CD63 antigen family protein 162 3e-40
Os09g0425900 Similar to Senescence-associated protein 5 156 2e-38
Os08g0260600 CD9/CD37/CD63 antigen family protein 127 1e-29
Os10g0503600 CD9/CD37/CD63 antigen family protein 126 2e-29
AK073982 112 3e-25
Os06g0572400 CD9/CD37/CD63 antigen family protein 108 7e-24
Os02g0728800 96 4e-20
Os02g0219700 CD9/CD37/CD63 antigen family protein 91 9e-19
Os03g0853200 CD9/CD37/CD63 antigen family protein 78 7e-15
Os12g0249100 72 3e-13
Os06g0653100 CD9/CD37/CD63 antigen family protein 71 1e-12
>Os01g0977100 CD9/CD37/CD63 antigen family protein
Length = 298
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/298 (81%), Positives = 242/298 (81%)
Query: 1 MYSRRAAAGGEQQHLSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLA 60
MYSRRAAAGGEQQHLSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLA
Sbjct: 1 MYSRRAAAGGEQQHLSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLA 60
Query: 61 IGFVTLLVSLAGFLGACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXR 120
IGFVTLLVSLAGFLGACYHVPS GI R
Sbjct: 61 IGFVTLLVSLAGFLGACYHVPSALWLYLAAMLLLVLALLGITVFGLAVTAGGGGTQVAGR 120
Query: 121 PYREFRLADYSSWLQRHVRAERYWRPALACVLAARACDTLAAWTPLDYLRNDLTPVQSGC 180
PYREFRLADYSSWLQRHVRAERYWRPALACVLAARACDTLAAWTPLDYLRNDLTPVQSGC
Sbjct: 121 PYREFRLADYSSWLQRHVRAERYWRPALACVLAARACDTLAAWTPLDYLRNDLTPVQSGC 180
Query: 181 CKPPTACTYYDDAXXXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXX 240
CKPPTACTYYDDA PDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWH
Sbjct: 181 CKPPTACTYYDDAQQQQQQPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHNVTILNVV 240
Query: 241 XXXXXXXFYSCACCAFRNTATATSSKTIFHLHPRWEYRWYLLYLCARESQGGGMDEDS 298
FYSCACCAFRNTATATSSKTIFHLHPRWEYRWYLLYLCARESQGGGMDEDS
Sbjct: 241 LLLLLILFYSCACCAFRNTATATSSKTIFHLHPRWEYRWYLLYLCARESQGGGMDEDS 298
>Os08g0443800 CD9/CD37/CD63 antigen family protein
Length = 277
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 123/256 (48%), Gaps = 10/256 (3%)
Query: 14 HLSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGF 73
LSN V+G +NLVTL+ S PI+ G+W+ G C L +P +A+G V + VSLAG
Sbjct: 4 RLSNNVIGALNLVTLLLSAPILSGGIWMATRGDGGECDRHLSSPAIALGAVLMAVSLAGL 63
Query: 74 LGACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSW 133
+GAC V G R YRE+RL DYS+W
Sbjct: 64 VGACCRVTWLLWVYLLAMFALIVALLGFTAFAFAVTNRGAGEAVSGRGYREYRLGDYSTW 123
Query: 134 LQRHVRAERYWRPALACVLAARACDTLA--AWTPLDYLRNDLTPVQSGCCKPPTACTYY- 190
L+RHV + + W +C+ A C +L T ++ +DL+PVQSGCCKPPT+C +
Sbjct: 124 LRRHVGSSKNWDKIRSCLAGADVCRSLQDRNETWAQFVADDLSPVQSGCCKPPTSCNFTY 183
Query: 191 -------DDAXXXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXXXX 243
A PDC WSN +CYGC SCKAGV+ L+R W
Sbjct: 184 GGGTRWGKTARLSSADPDCDEWSNDADEVCYGCRSCKAGVVAALKRDWKRVAIVNVVFLA 243
Query: 244 XXXXFYSCACCAFRNT 259
YS CCAF+N+
Sbjct: 244 FIVVVYSVGCCAFKNS 259
>Os05g0126100 CD9/CD37/CD63 antigen family protein
Length = 288
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 106/167 (63%), Gaps = 1/167 (0%)
Query: 15 LSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFL 74
SN ++G +NL TL+AS+P+IGAGLW+ A G ++ C S LQ PLL IGFV LLVSLAGF+
Sbjct: 6 FSNVMIGYLNLATLLASIPVIGAGLWM-AKGSTATCSSMLQTPLLVIGFVVLLVSLAGFV 64
Query: 75 GACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSWL 134
GAC+HV G+ RPYRE+ +DYSSWL
Sbjct: 65 GACFHVAWALWLYLLAMMLLIAFLLGLTAFGFAVTAGGGGTQVPGRPYREYHTSDYSSWL 124
Query: 135 QRHVRAERYWRPALACVLAARACDTLAAWTPLDYLRNDLTPVQSGCC 181
Q+H++ +YWRPALACV+ ++AC +A W+P+DYL++DLTP+Q C
Sbjct: 125 QKHIQDAKYWRPALACVVGSKACPKIANWSPMDYLQHDLTPIQMINC 171
>Os09g0425900 Similar to Senescence-associated protein 5
Length = 276
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 115/255 (45%), Gaps = 9/255 (3%)
Query: 14 HLSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGF 73
LSN ++G++N VT + SVP++G G+WL + C AP++A G LLVSLAG
Sbjct: 4 RLSNSLLGILNAVTFLLSVPVLGGGIWLATRADGTECERYFSAPVIAFGVFLLLVSLAGL 63
Query: 74 LGACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSW 133
+GAC V R Y+E+RL DYS+W
Sbjct: 64 VGACCRVNCLLWFYLVAMFVLIVVLFCFTVFAFVVTNKGAGEAVSGRGYKEYRLGDYSNW 123
Query: 134 LQRHVRAERYWRPALACVLAARACDTL--AAWTPLDYLRNDLTPVQSGCCKPPTACTY-- 189
LQ+ + + W +C+ ++ C L W + + DL+P++SGCCKPP++C +
Sbjct: 124 LQKRMENSKNWNRIRSCLQDSKVCKKLQDKNWDRTQFFKADLSPLESGCCKPPSSCNFLY 183
Query: 190 -----YDDAXXXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXXXXX 244
+ PDC W + LCY C SCKAG + L+R W
Sbjct: 184 VSGTNWTKVPTNSSDPDCNTWVDDGTQLCYNCQSCKAGAVATLKRDWKRVAVVCIVFLVF 243
Query: 245 XXXFYSCACCAFRNT 259
YS CCAFRN
Sbjct: 244 IVIVYSLGCCAFRNN 258
>Os08g0260600 CD9/CD37/CD63 antigen family protein
Length = 273
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 116/258 (44%), Gaps = 14/258 (5%)
Query: 16 SNRVVGLVNLVTLVASVPIIGAGLWLQA----HGGSSPCGSALQAPLLAIGFVTLLVSLA 71
SN V +N+VTL+ ++ AG++ A GG + C L+AP LA+G + VSLA
Sbjct: 6 SNAVFAAINVVTLLLGAAVLAAGIYYGAPHRGGGGVTECERFLRAPALALGGAIVAVSLA 65
Query: 72 GFLGACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYS 131
G GAC R +RE+ L DYS
Sbjct: 66 GLAGACCRATPLLWAYLLLTGLLILAAACFGVFALVVTNAGAGRAVSGRGFREYHLGDYS 125
Query: 132 SWLQRHVRAERYWRPALACVLAARACDTLAAWTPLD-YLRNDLTPVQSGCCKPPTAC--T 188
+WL+R V +W +C++ C +L + LD ++ ++L+P+QSGCCKPPTAC T
Sbjct: 126 TWLRRSVEDGGHWARIRSCLVDTGVCRSLKSNQTLDEFVNSNLSPLQSGCCKPPTACNFT 185
Query: 189 YYDDAX-------XXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXX 241
Y ++ PDC WSN LCYGC SCKAGVL LR W
Sbjct: 186 YQNETYWIKPPTPSNYSDPDCNSWSNDQSELCYGCQSCKAGVLGNLRSSWKKIAFVNAAF 245
Query: 242 XXXXXXFYSCACCAFRNT 259
YS CCA RN
Sbjct: 246 VALLLVVYSLGCCALRNN 263
>Os10g0503600 CD9/CD37/CD63 antigen family protein
Length = 270
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 111/257 (43%), Gaps = 12/257 (4%)
Query: 19 VVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFLGACY 78
V+ +N T++ ++ ++G G W+ H + C +L P++ +G V L+SL GFLGA
Sbjct: 9 VIRWINFFTMILALLVVGFGFWMSTH--NDECRRSLTIPVMGLGGVIFLISLVGFLGAWK 66
Query: 79 HVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSWLQRHV 138
+ Y+E+RL DYSSW + +
Sbjct: 67 KIACLLWTYLVMLFVVLVAIMVFTVLAFIITNTGTGHSVSGVRYKEYRLQDYSSWFIKQL 126
Query: 139 RAERYWRPALACVLAARACDTLAA--WTPLDYLRNDLTPVQSGCCKPPTAC-------TY 189
W +C++ + C+ L+ T Y DLTP++SGCC+PP C +Y
Sbjct: 127 NDTEKWTHLRSCLVKSDDCNGLSRRYKTLKQYKLADLTPMESGCCRPPAECGYPAVNASY 186
Query: 190 YDDAXX-XXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXXXXXXXXF 248
+D + DC + NA VLCY CDSCKAGV + ++ W
Sbjct: 187 FDLSYHPVSTNVDCKLYKNARSVLCYDCDSCKAGVAQYMKTEWRVVAIFNVILFVILSFV 246
Query: 249 YSCACCAFRNTATATSS 265
Y ACCA RNT + S
Sbjct: 247 YFVACCARRNTGESDSK 263
>AK073982
Length = 274
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 110/259 (42%), Gaps = 19/259 (7%)
Query: 20 VGL--VNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFLGAC 77
VGL +NLV + S+P+I AG+WL A S+ C LQ PL+ +G L V LAGF+ A
Sbjct: 6 VGLAAINLVAALLSIPVIAAGIWLSAQVDSA-CVQLLQWPLIGLGVAVLAVGLAGFVAAF 64
Query: 78 YHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXX--XXXXRPYREFRLADYS-SWL 134
+ +P + R + E+ L D+S SWL
Sbjct: 65 WRLPWLLLAYLVGMLLLVVALACLAVFVFVVTGGASSGGHTVPSRAFLEYELDDFSGSWL 124
Query: 135 QRHVR--AERYWRPALACVLAARACDTLAAW--TPLDYLRND-LTPVQSGCCKPPTACTY 189
+ V A R W C+ A C + T D+ LTP+QSGCCKPPT C Y
Sbjct: 125 RGRVDDPAGR-WEQIKTCLAATPICSDVNQTYATAQDFFSASWLTPLQSGCCKPPTRCGY 183
Query: 190 -------YDDAXXXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXXX 242
+ PDC WSN P LCY C SCKAG+L L R W
Sbjct: 184 TFVTPISWISPISAAADPDCGAWSNDPSQLCYSCSSCKAGLLHNLSREWRRADLILLVAT 243
Query: 243 XXXXXFYSCACCAFRNTAT 261
Y+ AC AFR T
Sbjct: 244 VALLAVYAFACYAFRTAKT 262
>Os06g0572400 CD9/CD37/CD63 antigen family protein
Length = 272
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 111/260 (42%), Gaps = 14/260 (5%)
Query: 15 LSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFL 74
+SN + VN + LV +VP++ G+W + G C + PL +G LLV+LAGF
Sbjct: 3 VSNNITACVNFLALVCAVPVVATGVWFASKQGDD-CARVARWPLAILGAALLLVALAGFA 61
Query: 75 GACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSWL 134
GA ++ + R Y ++RL YS+WL
Sbjct: 62 GAYWNRRGLLAAYLFAMAALITLLLALLVFAFAVTRPSGAYPAFARAYDDYRLDGYSTWL 121
Query: 135 QRHVRAE-RYWRPALACVLAARACDTLAA-----WTPLDYLRNDLTPVQSGCCKPPTACT 188
+ V + R W AC+ A+ C LA TP + ++ LTP+QSGCCKPPT C
Sbjct: 122 RDRVAGDPRRWEGIRACLAASDTCRKLAQESVFFITPEQFYQSHLTPLQSGCCKPPTVCG 181
Query: 189 Y-------YDDAXXXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXX 241
Y + + DC W N P LCY C SCKAG+L LR W
Sbjct: 182 YAYVSPTVWVNPANPAADADCAAWGNDPSQLCYECSSCKAGMLGTLREQWRRANVALVIA 241
Query: 242 XXXXXXFYSCACCAFRNTAT 261
FY C AF+N T
Sbjct: 242 TVALIFFYVIGCSAFKNAQT 261
>Os02g0728800
Length = 262
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 107/256 (41%), Gaps = 12/256 (4%)
Query: 14 HLSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGF 73
SN V+G ++ L+ASVP+IGAG +L H +S C ++ P +A+G LL+SL
Sbjct: 3 RFSNGVLGALSFAALLASVPLIGAGAYLLDHP-ASECQRLVRVPAVALGSAALLLSLMAI 61
Query: 74 LGA-CYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSS 132
G C + + Y ++R+ DYS
Sbjct: 62 AGVTCCRGAALLWAYASAMFLLIVGMFFVTAFVFVVTNRGVATAVSGTGYGDYRVRDYSE 121
Query: 133 WLQRHVRAERYWRPALACVLAARACD-TLAAWTPLDYLRNDLTPVQSGCCKPPTACTYYD 191
WL+ + W +C+ A C LA P ++ R L +QSGCCKPP C Y
Sbjct: 122 WLRARIEDYETWHRIESCMADAAVCGGPLAGINPGEFYRLHLPLIQSGCCKPPVYCGYER 181
Query: 192 DAXXXXXXP---------DCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXXX 242
P DC WSN VLC+ C++CKA L+ +RR+W
Sbjct: 182 VNETFWIAPARGLDAADVDCLEWSNDQAVLCFRCNACKASALDTVRRNWRAVAVLNVAVL 241
Query: 243 XXXXXFYSCACCAFRN 258
YS ACC+ R+
Sbjct: 242 AILMLAYSLACCSVRD 257
>Os02g0219700 CD9/CD37/CD63 antigen family protein
Length = 270
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 108/257 (42%), Gaps = 14/257 (5%)
Query: 15 LSNRVVGLVNLVTLVASVPIIGAGLWLQAHGGSSPCGSALQAPLLAIGFVTLLVSLAGFL 74
+SN + V L+ L+ +VP+I +G+W + G C + P+ +G + LL +LAGF+
Sbjct: 3 VSNNITACVTLMALICAVPVIASGVWFASAQGEE-CARLARWPVAILGGLILLAALAGFV 61
Query: 75 GACYHVPSXXXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXXRPYREFRLADYSSWL 134
GA ++ + R Y E+ L +S WL
Sbjct: 62 GAYWNRRRLLAFYLFAMASLIALLIALLVFAFAVTRGSGAYPVLGRAYDEYHLDGFSMWL 121
Query: 135 QRHVRAE-RYWRPALACVLAARACDTLAA----WTPLDYLRNDLTPVQSGCCKPPTACTY 189
+ +V + W AC++ + C LA T + ++ L+P+QSGCCKPP C Y
Sbjct: 122 RGYVSDDPARWERIKACLVVSDTCKKLARQAGFLTADQFYQSRLSPLQSGCCKPPAVCGY 181
Query: 190 --------YDDAXXXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQLRRHWHXXXXXXXXX 241
A DC W N P LCY C+SC+AG+L LR WH
Sbjct: 182 NYVSPTVWAGPAARPAADADCGAWGNDPSQLCYECESCRAGLLAALRAQWHRANVALVVA 241
Query: 242 XXXXXXFYSCACCAFRN 258
Y C A++N
Sbjct: 242 TVALVFLYLVGCSAYKN 258
>Os03g0853200 CD9/CD37/CD63 antigen family protein
Length = 285
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 64/130 (49%), Gaps = 21/130 (16%)
Query: 123 REFRLADYSS-WLQRHVRAERYWRPALACVLAARA--CDTLAA---------WTPLDYLR 170
RE+ L DY S WL+ V YW AC+ R C + + P R
Sbjct: 126 REYNLDDYKSGWLRARVDDAAYWATTSACLRGDRGAGCKAMTKLVRDPHSGLFVPDGGRR 185
Query: 171 N-DLTPVQSGCCKPPTACTY-YDDAXXXXXXP-------DCYRWSNAPGVLCYGCDSCKA 221
+ D++P+QSGCCKPP++C + Y + P DC RWSN LC+ CDSCKA
Sbjct: 186 HVDMSPIQSGCCKPPSSCGFTYVNGTTWTPTPAAATNNVDCSRWSNDQQKLCFQCDSCKA 245
Query: 222 GVLEQLRRHW 231
G L+ R+ W
Sbjct: 246 GFLDHTRKAW 255
>Os12g0249100
Length = 310
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 35/144 (24%)
Query: 123 REFRLADYSSWLQRHVRAERYWRPALACVLAARACDTLAA-------------------W 163
RE+ L +YS WL+ V YW AC+ C + W
Sbjct: 125 REYNLEEYSGWLRGRVADPHYWETTSACLRDGNVCSGMTRLVRDPDTGIFVPELSRYERW 184
Query: 164 TPLDYLRND---LTPVQSGCCKPPTACTY-YDDAXX------------XXXXPDCYRWSN 207
++ ++P++SGCCKPPT+C + Y + DC RWSN
Sbjct: 185 LKEHGIKKGVHVMSPIESGCCKPPTSCGFRYVNGTTWIPTPAAAGTPAAATNVDCSRWSN 244
Query: 208 APGVLCYGCDSCKAGVLEQLRRHW 231
LC+ CDSCKAG L+ +++ W
Sbjct: 245 NQQTLCFQCDSCKAGFLDDIKKAW 268
>Os06g0653100 CD9/CD37/CD63 antigen family protein
Length = 117
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 176 VQSGCCKPPTACTY---------YDDAXXXXXXPDCYRWSNAPGVLCYGCDSCKAGVLEQ 226
+QSGCCKPPT C + PDC WSN LCY C SCKAGVL
Sbjct: 15 IQSGCCKPPTGCNFAYVSETVWTKPSGFNSTDDPDCTTWSNDQTALCYDCQSCKAGVLAN 74
Query: 227 LRRHWHXXXXXXXXXXXXXXXFYSCACCAFRNT 259
L+ W YS CCAFRN
Sbjct: 75 LKNDWKKIATVNIIFLIFLIIVYSVGCCAFRNN 107
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.137 0.475
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,685,354
Number of extensions: 351761
Number of successful extensions: 971
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 939
Number of HSP's successfully gapped: 15
Length of query: 298
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 198
Effective length of database: 11,814,401
Effective search space: 2339251398
Effective search space used: 2339251398
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 156 (64.7 bits)