FiT-DB / Search/ Help/ Sample detail

Os05g0126100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : CD9/CD37/CD63 antigen family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10 (0.0198) R2 : 0.00902
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0849 (0.0416) R2dN8 : 0.0116 R2N8 : 0.00902
σ : 0.373
deviance : 63.71
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.73 0.247 9.97 0.874 0.269 1 -0.14 -0.867 0.373 0.0721 29.55 230 -- --
28.42 0.248 9.99 0.717 0.283 0.991 -0.308 -- 0.339 0.61 28.1 240 -- --
27.79 0.246 9.97 0.897 0.26 1.01 -- -0.969 0.376 23.9 29.71 217 -- --
28.79 0.25 9.99 0.732 0.277 1.01 -- -- 0.343 0.00912 28.57 240 -- --
29.97 0.256 9.97 0.915 -- 1.36 -- -1.31 0.368 -- 47.1 64 -- --
42.27 0.305 10 0.459 0.494 -- -0.401 -- 0.125 2.28 -- -- -- --
42.86 0.307 10 0.471 0.492 -- -- -- 0.128 2.18 -- -- -- --
31.43 0.262 9.99 0.734 -- 1.34 -- -- 0.318 -- 63.9 54 -- --
41.68 0.301 10 -- 0.31 0.793 -- -- 0.166 1.08 52.57 160 -- --
57.33 0.354 10 0.492 -- -- -- -- 0.139 -- -- -- -- --
48.7 0.326 10 -- 0.501 -- -- -- 0.0751 2.2 -- -- -- --
44.82 0.313 10 -- -- 1.12 -- -- 0.211 -- 87.98 7 -- --
63.71 0.373 10 -- -- -- -- -- 0.0849 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.35 temperature 30 270 < th dose dependent rect. 18 23
2 27.39 temperature 30 270 < th dose dependent rect. 2 23
6 27.50 temperature 30 30 < th dose dependent rect. 5 23
8 27.54 radiation 1 14400 < th dose dependent rect. 4 3
10 27.54 radiation 1 14400 < th dose dependent rect. 24 7
16 27.54 temperature 10 270 > th dose dependent rect. 6 23
29 27.59 radiation 1 14400 < th dose dependent sin 9 NA
31 27.59 radiation 1 14400 < th dose dependent rect. 4 8
34 27.59 radiation 1 14400 < th dose dependent rect. 21 15
35 27.59 radiation 1 14400 < th dose dependent rect. 19 17
111 27.70 radiation 30 14400 > th dose independent rect. 16 16
138 27.75 temperature 30 270 < th dose dependent rect. 15 23
162 27.81 temperature 20 270 > th dose dependent rect. 16 23
175 27.86 radiation 40 14400 < th dose independent rect. 15 18
182 27.87 temperature 30 270 < th dose dependent no NA NA
190 27.89 radiation 1 14400 < th dose independent rect. 18 13
191 27.89 temperature 30 270 < th dose dependent rect. 11 23
195 27.90 atmosphere 1005 43200 > th dose dependent rect. 17 1
197 27.90 temperature 10 720 > th dose dependent rect. 17 18
202 27.92 radiation 1 14400 < th dose dependent no NA NA
204 27.92 radiation 1 14400 < th dose dependent rect. 4 15
247 27.92 radiation 1 14400 < th dose dependent rect. 8 23
248 27.92 radiation 1 14400 < th dose dependent rect. 10 23
265 27.94 radiation 40 14400 < th dose independent rect. 6 3
285 27.95 radiation 40 14400 < th dose independent rect. 17 16
306 27.97 radiation 40 14400 < th dose independent rect. 24 9
307 27.97 radiation 40 14400 < th dose independent rect. 22 11
311 27.97 atmosphere 1005 43200 > th dose dependent rect. 19 1
320 27.98 radiation 1 43200 < th dose independent rect. 18 11
334 27.99 radiation 1 14400 < th dose independent rect. 18 15
342 28.00 radiation 1 14400 < th dose independent rect. 18 18
373 28.02 temperature 30 10 < th dose dependent rect. 18 23
386 28.04 radiation 1 43200 < th dose independent rect. 17 2
395 28.04 radiation 1 43200 > th dose independent rect. 18 11
398 28.04 radiation 1 14400 < th dose independent rect. 18 20
409 28.04 temperature 30 90 < th dose dependent rect. 5 20
418 28.06 radiation 30 14400 > th dose independent rect. 7 1
462 28.07 atmosphere 1005 43200 > th dose dependent sin 17 NA
505 28.09 atmosphere 1005 43200 > th dose dependent rect. 23 1
506 28.09 radiation 1 14400 < th dose dependent rect. 17 3
528 28.09 temperature 20 90 > th dose dependent rect. 8 23
574 28.12 temperature 15 90 > th dose dependent no NA NA
598 28.14 radiation 1 43200 > th dose independent rect. 17 2
728 28.19 radiation 1 14400 < th dose dependent rect. 8 11
759 28.20 radiation 1 14400 > th dose independent rect. 17 19
809 28.21 atmosphere 1005 43200 > th dose dependent no NA NA
827 28.21 atmosphere 1005 43200 > th dose dependent rect. 22 23
831 28.22 radiation 1 14400 > th dose independent rect. 18 15
862 28.23 humidity 50 43200 > th dose independent rect. 8 4
916 28.25 atmosphere 1005 43200 > th dose dependent rect. 9 1
932 28.26 humidity 50 43200 > th dose independent rect. 10 2
950 28.26 temperature 15 270 > th dose dependent rect. 19 23
952 28.27 radiation 1 14400 < th dose independent rect. 6 19
957 28.27 humidity 50 43200 < th dose dependent rect. 10 8
972 28.27 temperature 30 10 < th dose dependent rect. 3 23
973 28.27 temperature 30 10 < th dose dependent rect. 15 23
975 28.28 humidity 50 43200 < th dose independent rect. 8 4
976 28.28 radiation 1 14400 < th dose independent rect. 6 13