BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0940100 Os01g0940100|AK107602
(357 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0940100 Similar to Hexokinase 655 0.0
Os05g0375100 429 e-120
Os01g0742500 Similar to Hexokinase 320 1e-87
Os07g0197100 Similar to Hexokinase 2 (EC 2.7.1.1) 314 5e-86
Os01g0190400 Similar to Hexokinase 293 1e-79
Os05g0522500 Similar to Hexokinase 1 (EC 2.7.1.1) 290 2e-78
Os07g0446800 Similar to Hexokinase 280 1e-75
Os05g0187100 Similar to Hexokinase 236 1e-62
Os01g0722700 Similar to Hexokinase 145 4e-35
Os05g0532600 Similar to Hexokinase 87 1e-17
>Os01g0940100 Similar to Hexokinase
Length = 357
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/357 (92%), Positives = 332/357 (92%)
Query: 1 NFVALALKNFLEGEDDQDGKMALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVGRDVAQ 60
NFVALALKNFLEGEDDQDGKMALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVGRDVAQ
Sbjct: 1 NFVALALKNFLEGEDDQDGKMALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVGRDVAQ 60
Query: 61 CLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTDAIIKC 120
CLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTDAIIKC
Sbjct: 61 CLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTDAIIKC 120
Query: 121 QGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLGEIARL 180
QGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLGEIARL
Sbjct: 121 QGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLGEIARL 180
Query: 181 VFHRMAQESDVFGDAADSLSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKIPDAPLK 240
VFHRMAQESDVFGDAADSLSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKIPDAPLK
Sbjct: 181 VFHRMAQESDVFGDAADSLSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKIPDAPLK 240
Query: 241 TRRLVVKVCDIVTRRAARLAAAGIVGILKKLXXXXXXXXXXXXXXXQPRRTVVAIEGGLY 300
TRRLVVKVCDIVTRRAARLAAAGIVGILKKL QPRRTVVAIEGGLY
Sbjct: 241 TRRLVVKVCDIVTRRAARLAAAGIVGILKKLGRDGSGAASSGRGRGQPRRTVVAIEGGLY 300
Query: 301 QGYPVFREYLDEALVEILGEEVARNVTLRVTEDGSXXXXXXXXXXHSSNRQQQGGPI 357
QGYPVFREYLDEALVEILGEEVARNVTLRVTEDGS HSSNRQQQGGPI
Sbjct: 301 QGYPVFREYLDEALVEILGEEVARNVTLRVTEDGSGVGAALLAAVHSSNRQQQGGPI 357
>Os05g0375100
Length = 511
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/337 (68%), Positives = 267/337 (79%), Gaps = 2/337 (0%)
Query: 1 NFVALALKNFLEGEDDQDGKMALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVGRDVAQ 60
NF+A ALKNF+E E + ALGFTFSFPVRQ S+SSG+LIRWTK FSI + VG+DVAQ
Sbjct: 155 NFIASALKNFIEREGGEVEGRALGFTFSFPVRQTSISSGTLIRWTKEFSIEEAVGKDVAQ 214
Query: 61 CLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTDAIIKC 120
CLNEALA GLN++V LVN+TVGTLALGHYYD+DTVAAVIIG+GTNACYIER DAIIK
Sbjct: 215 CLNEALARNGLNMKVNVLVNNTVGTLALGHYYDDDTVAAVIIGAGTNACYIERNDAIIKS 274
Query: 121 QGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLGEIARL 180
G +TNS VVN+EWG+F + TPYDI ++ET N DQGFEKMISG+YLGEIARL
Sbjct: 275 LGRVTNSERTVVNVEWGSFRPPQIELTPYDICFNNETWNYYDQGFEKMISGVYLGEIARL 334
Query: 181 VFHRMAQESDVFGDAADSLSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKIPDAPLK 240
VF +MA+ESD+FG A D LS PF+LSTP LAAIREDDSPDL EV +IL EHLK+PD PLK
Sbjct: 335 VFQKMAEESDIFGTAVDGLSTPFVLSTPNLAAIREDDSPDLREVGKILEEHLKLPDVPLK 394
Query: 241 TRRLVVKVCDIVTRRAARLAAAGIVGILKKLXXXXXXXXXXXXXXXQP--RRTVVAIEGG 298
TR+LV +V DI+TRRAARLAAA IV IL+K+ + RRTVVAIEGG
Sbjct: 395 TRKLVARVSDIITRRAARLAAAAIVAILQKIGCDGTLCGSTQVRTMRGVRRRTVVAIEGG 454
Query: 299 LYQGYPVFREYLDEALVEILGEEVARNVTLRVTEDGS 335
L++GY VFREYL+EALVEILGEE+A V+LRV E+GS
Sbjct: 455 LFEGYSVFREYLNEALVEILGEEIAATVSLRVMEEGS 491
>Os01g0742500 Similar to Hexokinase
Length = 506
Score = 320 bits (819), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 173/353 (49%), Positives = 227/353 (64%), Gaps = 11/353 (3%)
Query: 1 NFVALALKNFL--EGED---DQDGKMALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVG 55
+F+A L++F+ EGED + + LGFTFSFPV Q S+SSG+LI+WTKGFSI TVG
Sbjct: 153 DFIAAELESFVKTEGEDFHLPEGRQRELGFTFSFPVHQTSISSGTLIKWTKGFSINGTVG 212
Query: 56 RDVAQCLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTD 115
DV L+ A+ GL+++VTALVNDTVGTLA G Y D D AAVI+G+GTNA Y+E +
Sbjct: 213 EDVVAELSRAMERQGLDMKVTALVNDTVGTLAGGRYVDNDVAAAVILGTGTNAAYVEHAN 272
Query: 116 AIIKCQGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLG 175
AI K GLL SG MV+NMEWGNF S LPR+ YD LD E+ N +Q +EKMISGMYLG
Sbjct: 273 AIPKWTGLLPRSGNMVINMEWGNFKSERLPRSDYDNALDFESLNPGEQIYEKMISGMYLG 332
Query: 176 EIARLVFHRMAQESDVFGDAADS-LSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKI 234
EI R + ++A ++ +FGD + L FIL TP ++A+ D S DL + L++ L +
Sbjct: 333 EIVRRILLKLAHDASLFGDVVPTKLEQRFILRTPDMSAMHHDTSHDLKHLGAKLKDILGV 392
Query: 235 PDAPLKTRRLVVKVCDIVTRRAARLAAAGIVGILKKLXXXXXXXXXXXXXXXQPRRTVVA 294
D L+ R + + VCD+V R ARLAAAGI GILKKL Q +RTV+A
Sbjct: 393 ADTSLEARYITLHVCDLVAERGARLAAAGIYGILKKL-----GRDRVPSDGSQKQRTVIA 447
Query: 295 IEGGLYQGYPVFREYLDEALVEILGEEVARNVTLRVTEDGSXXXXXXXXXXHS 347
++GGLY+ Y FR L+ L ++LGEE A +V +++ DGS HS
Sbjct: 448 LDGGLYEHYKKFRTCLEATLADLLGEEAASSVVVKLANDGSGIGAALLAASHS 500
>Os07g0197100 Similar to Hexokinase 2 (EC 2.7.1.1)
Length = 509
Score = 314 bits (805), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 167/341 (48%), Positives = 222/341 (65%), Gaps = 14/341 (4%)
Query: 1 NFVALALKNFLEGEDD-----QDGKMALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVG 55
+F+A L F+ E D Q K LGFTFSFPV Q S+ SG LI+WTKGF++ T G
Sbjct: 155 DFIASGLSRFVATEGDKFHLPQGRKRELGFTFSFPVNQTSIDSGILIKWTKGFAVSGTAG 214
Query: 56 RDVAQCLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTD 115
+DV CLN A+ GL++RV+ALVNDTVGTLA Y+D+D + AVI+G+GTNACYI+RT+
Sbjct: 215 KDVVACLNAAMERQGLDMRVSALVNDTVGTLAGARYWDDDVMVAVILGTGTNACYIQRTE 274
Query: 116 AIIKCQGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLG 175
AI K Q L +G ++N EWG F S LP T +D +DDE+ N +Q FEK ISGMYLG
Sbjct: 275 AIPKLQHLKLETGNTIINTEWGAF-SDGLPLTEFDREMDDESINPGEQIFEKTISGMYLG 333
Query: 176 EIARLVFHRMAQESDVFGDA-ADSLSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKI 234
EI R V +MA+ SD+FG + L+ PF+L TP L A+++D S +L EV IL + + +
Sbjct: 334 EIVRRVLVKMAEVSDLFGHSFPKKLAEPFVLRTPHLCAMQQDTSDNLGEVESILSDVIGV 393
Query: 235 PDAPLKTRRLVVKVCDIVTRRAARLAAAGIVGILKKLXXXXXXXXXXXXXXXQPRRTVVA 294
A L RR+ V+V D + RR RLA AGIVGIL+K+ RRTVVA
Sbjct: 394 SQASLLARRVTVEVSDCIIRRGGRLAGAGIVGILEKMENDSRGHIFG-------RRTVVA 446
Query: 295 IEGGLYQGYPVFREYLDEALVEILGEEVARNVTLRVTEDGS 335
++GGLY+ YP +R Y+ EA+ E+LG E + + + T+DGS
Sbjct: 447 MDGGLYEKYPQYRRYMKEAVAELLGPERSNRIAIEHTKDGS 487
>Os01g0190400 Similar to Hexokinase
Length = 458
Score = 293 bits (750), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/340 (50%), Positives = 225/340 (66%), Gaps = 15/340 (4%)
Query: 2 FVALALKNFL----EGEDDQDGKMA-LGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVGR 56
F+A L F+ EG D +GK LGFTFSFPVRQ SV+SG+L++WTK FSI D VG
Sbjct: 115 FIAGELGKFVAEEEEGTDMPNGKKKELGFTFSFPVRQRSVASGTLVKWTKAFSIDDAVGE 174
Query: 57 DVAQCLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTDA 116
DV L A+ GL++ V AL+ND VGTLA YYDED VA VI G+GTNA Y+E+ +A
Sbjct: 175 DVVAELQTAMVKQGLDMHVAALINDAVGTLAGARYYDEDVVAGVIFGTGTNAAYVEKANA 234
Query: 117 IIKCQGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLGE 176
I K +G L NSG MV+NMEWGNF+SSHLP T YD LD E+ N +Q +EK+ SGMYLGE
Sbjct: 235 IPKWEGELPNSGDMVINMEWGNFYSSHLPVTEYDEALDKESLNPGEQIYEKLTSGMYLGE 294
Query: 177 IARLVFHRMAQESDVFGDAADS-LSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKIP 235
I R V +++ +S +FG +S L F L TP ++A+ D++PDL V L + L+I
Sbjct: 295 IVRRVLLKLSLQSGIFGSIDNSKLKTCFHLRTPHISAMHHDETPDLKIVAEKLHQILEIT 354
Query: 236 DAPLKTRRLVVKVCDIVTRRAARLAAAGIVGILKKLXXXXXXXXXXXXXXXQPRRTVVAI 295
L+ R++VV++CDIV RRAARLAAAG+ GIL KL +R+V+AI
Sbjct: 355 HTSLEIRKMVVEICDIVARRAARLAAAGVAGILMKL---------GRNGGINNQRSVIAI 405
Query: 296 EGGLYQGYPVFREYLDEALVEILGEEVARNVTLRVTEDGS 335
+GGL++ Y FRE L+ L E+LGEE +++V ++ DGS
Sbjct: 406 DGGLFEHYTKFRECLESTLGELLGEEASKSVAVKHANDGS 445
>Os05g0522500 Similar to Hexokinase 1 (EC 2.7.1.1)
Length = 507
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/353 (45%), Positives = 223/353 (63%), Gaps = 11/353 (3%)
Query: 1 NFVALALKNFLEGEDDQ----DGKM-ALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVG 55
+F+A AL F++ E D +G+ LGFTFSFPV Q S+SSG+LI+WTKGFSI D VG
Sbjct: 154 DFIASALSKFVDTEGDDFHLPEGRQRELGFTFSFPVSQTSISSGTLIKWTKGFSINDAVG 213
Query: 56 RDVAQCLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTD 115
DV L +A+ GL++++ ALVNDTVGTLA G Y D VAA+I+G+GTNA Y+E +
Sbjct: 214 EDVVSELGKAMERQGLDMKIAALVNDTVGTLAGGRYADNSVVAAIILGTGTNAAYVENAN 273
Query: 116 AIIKCQGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLG 175
AI K GLL SG MV+N EWG+F S LP + +D +D E+ N +Q +EK+ISGMYLG
Sbjct: 274 AIPKWTGLLPRSGNMVINTEWGSFKSDKLPLSEFDKAMDFESLNPGEQIYEKLISGMYLG 333
Query: 176 EIARLVFHRMAQESDVFGDAADS-LSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKI 234
EI R + ++A ++ +FGD S L PF+L TP ++A+ D S DL V L++ + +
Sbjct: 334 EIVRRILLKLAHDAALFGDVVPSKLEQPFVLRTPDMSAMHHDSSHDLKTVGAKLKDIVGV 393
Query: 235 PDAPLKTRRLVVKVCDIVTRRAARLAAAGIVGILKKLXXXXXXXXXXXXXXXQPRRTVVA 294
PD L+ R + +CDIV RAARLAAAGI G+LKKL + RTV+A
Sbjct: 394 PDTSLEVRYITSHICDIVAERAARLAAAGIYGVLKKL-----GRDKMPKDGSKMPRTVIA 448
Query: 295 IEGGLYQGYPVFREYLDEALVEILGEEVARNVTLRVTEDGSXXXXXXXXXXHS 347
++GGLY+ Y F L+ L ++LG++V+ +V ++ DGS HS
Sbjct: 449 LDGGLYEHYKKFSSCLESTLTDLLGDDVSSSVVTKLANDGSGIGAALLAASHS 501
>Os07g0446800 Similar to Hexokinase
Length = 498
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/326 (48%), Positives = 207/326 (63%), Gaps = 8/326 (2%)
Query: 23 LGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVGRDVAQCLNEALANCGLNVRVTALVNDT 82
LGFTFSFPV Q S++SG+LIRWTK F++ D +G DV L A++ GL++RV+AL+NDT
Sbjct: 177 LGFTFSFPVHQTSIASGTLIRWTKAFAVDDAIGEDVVAALQAAMSERGLDMRVSALINDT 236
Query: 83 VGTLALGHYYDEDTVAAVIIGSGTNACYIERTDAIIKCQ-GLLTNSGGMVVNMEWGNFWS 141
VGTLA G YYDED VAAVI+G+GTNA Y+E AI K L S MV+N EWG+F S
Sbjct: 237 VGTLAAGSYYDEDVVAAVILGTGTNAAYVEDATAIAKLHPSQLPASNTMVINTEWGSFAS 296
Query: 142 SHLPRTPYDILLDDETHNRNDQGFEKMISGMYLGEIARLVFHRMAQESDVFGDAADSLSN 201
LP T +D LD E+ N +Q +EK+ISGMYLGEI R V +++ A L+
Sbjct: 297 PCLPLTEFDEALDQESLNPGEQTYEKLISGMYLGEIVRRVLLKISSRCPSLLGGAGELAT 356
Query: 202 PFILSTPFLAAIREDDSPDLSEVRRILREHLKIPDAPLKTRRLVVKVCDIVTRRAARLAA 261
PF+L TP ++A+ D++PDLS V L L I + RR+VV+VCDIV RAARLAA
Sbjct: 357 PFVLRTPDVSAMHHDETPDLSIVGEKLERTLGIRGTSPEARRMVVEVCDIVATRAARLAA 416
Query: 262 AGIVGILKKLXXXXXXXXXXXXXXXQPRRTVVAIEGGLYQGYPVFREYLDEALVEILGEE 321
AGIVGILKK+ + RR+VVA++GGL++ Y FR ++ A+ E+LGE
Sbjct: 417 AGIVGILKKI-------GRVDGGEGRRRRSVVAVDGGLFEHYGKFRRCMESAVRELLGEA 469
Query: 322 VARNVTLRVTEDGSXXXXXXXXXXHS 347
A V +++ DGS HS
Sbjct: 470 AAERVVVKLASDGSGLGAALVAAAHS 495
>Os05g0187100 Similar to Hexokinase
Length = 374
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 160/238 (67%), Gaps = 5/238 (2%)
Query: 2 FVALALKNFLEGEDDQ----DGKMALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVGRD 57
F+A AL F+ E D + LGFTFSFPVRQ S++SG+LI+WTK FSI D VG D
Sbjct: 118 FIASALAKFVADEGHNAVFNDRQRELGFTFSFPVRQTSIASGTLIKWTKAFSIDDAVGED 177
Query: 58 VAQCLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTDAI 117
V L A+ GL++RV+AL+NDTVGTLA G YYDED V VI+G+G+NA Y+E+ +AI
Sbjct: 178 VVAELQMAMEKQGLDMRVSALINDTVGTLAAGSYYDEDIVVGVILGTGSNAAYLEKANAI 237
Query: 118 IKCQGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNRNDQGFEKMISGMYLGEI 177
K +G L SG MV+N EWGNF SS LP T YD LD E+ N +Q FEK+ISGMYLGEI
Sbjct: 238 PKLEGELPKSGNMVINTEWGNFSSSCLPITEYDEALDKESLNPGEQIFEKLISGMYLGEI 297
Query: 178 ARLVFHRMAQESDVFGDAADS-LSNPFILSTPFLAAIREDDSPDLSEVRRILREHLKI 234
R V +++ +S +FG+ + L FIL TP ++ + D +PDL V L ++LK+
Sbjct: 298 VRRVLLKISLQSSIFGNLDQTKLKTRFILRTPDISVMHHDGTPDLRIVAEKLADNLKV 355
>Os01g0722700 Similar to Hexokinase
Length = 294
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 100/136 (73%), Gaps = 5/136 (3%)
Query: 1 NFVALALKNFL--EGED---DQDGKMALGFTFSFPVRQISVSSGSLIRWTKGFSIRDTVG 55
+FVA+AL F+ EGED + + LGFTFSFPV+Q S++SG+LI+WTK F+I + VG
Sbjct: 147 DFVAVALAKFVASEGEDCHLPEGTQRELGFTFSFPVKQKSLASGTLIKWTKSFAIDEMVG 206
Query: 56 RDVAQCLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVIIGSGTNACYIERTD 115
+DV LN A+ + GL+++VTALVNDTVGTLA G Y + DT+AAVI+G+G+NA YI+ D
Sbjct: 207 KDVVAELNMAIRSQGLDMKVTALVNDTVGTLAAGRYVNHDTIAAVILGTGSNAAYIDHAD 266
Query: 116 AIIKCQGLLTNSGGMV 131
AI K G L SG MV
Sbjct: 267 AIPKWHGSLPKSGNMV 282
>Os05g0532600 Similar to Hexokinase
Length = 135
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 82/138 (59%), Gaps = 8/138 (5%)
Query: 216 DDSPDLSEVRRILREHLKIPDAPLKTRRLVVKVCDIVTRRAARLAAAGIVGILKKLXXXX 275
D SPDL V L++ L + + LKTRRLVV VCDIV +RAA LAAAGI GILKKL
Sbjct: 4 DRSPDLRTVGAKLKDILGVQNTSLKTRRLVVDVCDIVAKRAAHLAAAGIHGILKKL---- 59
Query: 276 XXXXXXXXXXXQPRRTVVAIEGGLYQGYPVFREYLDEALVEILGEEVARNVTLRVTEDGS 335
+RTV+A++GGLY+ Y +F E ++ L ++LGE+V+ + +++ +DGS
Sbjct: 60 ----GRDVPNTDKQRTVIAVDGGLYEHYTIFAECVESTLRDMLGEDVSSTIVIKLAKDGS 115
Query: 336 XXXXXXXXXXHSSNRQQQ 353
HS R+ +
Sbjct: 116 GIGAALLAAAHSQYREAE 133
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.138 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,164,180
Number of extensions: 441085
Number of successful extensions: 841
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 827
Number of HSP's successfully gapped: 10
Length of query: 357
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 255
Effective length of database: 11,709,973
Effective search space: 2986043115
Effective search space used: 2986043115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)