Os07g0446800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Hexokinase.
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Os07g0446800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Hexokinase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.72 | 0.577 | 5.82 | 1.23 | 0.503 | -2.23 | 0.35 | 0.0244 | 0.206 | 12.7 | 9.731 | 95 | -- | -- |
| 150.58 | 0.576 | 5.81 | 1.2 | 0.595 | -2.25 | 0.418 | -- | 0.208 | 11.9 | 9.785 | 94 | -- | -- |
| 151.11 | 0.573 | 5.81 | 1.29 | 0.505 | -2.23 | -- | 0.387 | 0.223 | 12.8 | 8.709 | 94 | -- | -- |
| 151.24 | 0.573 | 5.82 | 1.24 | 0.504 | -2.23 | -- | -- | 0.207 | 12.8 | 9.121 | 94 | -- | -- |
| 155.59 | 0.581 | 5.83 | 1.18 | -- | -1.84 | -- | -0.0655 | 0.161 | -- | 7.838 | 468 | -- | -- |
| 197.96 | 0.66 | 5.88 | 0.77 | 0.361 | -- | 0.886 | -- | -0.103 | 6.8 | -- | -- | -- | -- |
| 199.96 | 0.662 | 5.89 | 0.784 | 0.364 | -- | -- | -- | -0.106 | 6.68 | -- | -- | -- | -- |
| 155.6 | 0.581 | 5.83 | 1.19 | -- | -1.84 | -- | -- | 0.163 | -- | 9.72 | 468 | -- | -- |
| 186.81 | 0.64 | 5.86 | -- | 0.455 | -1.66 | -- | -- | 0.00504 | 11.1 | -6.943 | 94 | -- | -- |
| 206.88 | 0.672 | 5.89 | 0.793 | -- | -- | -- | -- | -0.0982 | -- | -- | -- | -- | -- |
| 216.16 | 0.688 | 5.9 | -- | 0.374 | -- | -- | -- | -0.193 | 6.56 | -- | -- | -- | -- |
| 189.96 | 0.642 | 5.87 | -- | -- | -1.44 | -- | -- | -0.0191 | -- | 9.553 | 407 | -- | -- |
| 223.45 | 0.698 | 5.91 | -- | -- | -- | -- | -- | -0.186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.15 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 4 | 149.63 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 7 | 149.90 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 22 |
| 8 | 149.92 | temperature | 20 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 10 | 150.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 23 |
| 20 | 150.75 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 25 | 150.94 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 31 | 151.24 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 39 | 151.81 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 42 | 151.88 | temperature | 15 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 46 | 151.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 48 | 152.05 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 50 | 152.07 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 54 | 152.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 62 | 152.59 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 63 | 152.62 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 67 | 152.69 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 74 | 152.93 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 76 | 152.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 77 | 152.98 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 91 | 153.27 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 94 | 153.36 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 98 | 153.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 104 | 153.71 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 105 | 153.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 18 |
| 108 | 153.76 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 132 | 153.99 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 5 |
| 139 | 154.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 150 | 154.26 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 178 | 154.53 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 181 | 154.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 192 | 154.69 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 194 | 154.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 198 | 154.77 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 213 | 154.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 227 | 155.01 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 237 | 155.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 247 | 155.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 248 | 155.18 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 253 | 155.21 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 259 | 155.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 262 | 155.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 11 |
| 265 | 155.32 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 273 | 155.36 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 282 | 155.38 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 288 | 155.41 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 8 |
| 315 | 155.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 16 |
| 374 | 155.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 403 | 155.81 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 462 | 155.95 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 472 | 155.97 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 583 | 156.16 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 665 | 156.32 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 688 | 156.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 757 | 156.49 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 805 | 156.56 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 810 | 156.57 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 846 | 156.62 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 901 | 156.71 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 944 | 156.77 | temperature | 10 | 4320 | > th | dose dependent | sin | 15 | NA |