BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0870300 Os01g0870300|AK120352
(498 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0870300 Ammonium transporter 1012 0.0
Os02g0550800 Ammonium transporter family protein 722 0.0
Os01g0831900 Similar to Ammonium transporter 639 0.0
Os05g0468700 Ammonium transporter 635 0.0
Os12g0105100 558 e-159
Os03g0838400 Similar to Ammonium transporter 546 e-155
Os11g0105300 393 e-109
Os01g0831300 Similar to Ammonium transporter 293 2e-79
Os03g0749050 223 2e-58
Os02g0620500 Similar to Ammonium transporter Amt1 85 1e-16
Os02g0620600 Ammonium transporter family protein 78 2e-14
>Os01g0870300 Ammonium transporter
Length = 498
Score = 1012 bits (2616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/498 (100%), Positives = 498/498 (100%)
Query: 1 MSGDAFNMSVAYQPSGMAVPEWLNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKKWAV 60
MSGDAFNMSVAYQPSGMAVPEWLNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKKWAV
Sbjct: 1 MSGDAFNMSVAYQPSGMAVPEWLNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKKWAV 60
Query: 61 NSAFMALYAFAAVWLCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYK 120
NSAFMALYAFAAVWLCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYK
Sbjct: 61 NSAFMALYAFAAVWLCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYK 120
Query: 121 GGGGADAVVETPWVNPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLT 180
GGGGADAVVETPWVNPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLT
Sbjct: 121 GGGGADAVVETPWVNPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLT 180
Query: 181 FSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPPNN 240
FSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPPNN
Sbjct: 181 FSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPPNN 240
Query: 241 VLLMLTGAGILWMGWAGFNGGDPYSANIDSSLAVLNTNICAATSLLVWTCLDVIFFKKPS 300
VLLMLTGAGILWMGWAGFNGGDPYSANIDSSLAVLNTNICAATSLLVWTCLDVIFFKKPS
Sbjct: 241 VLLMLTGAGILWMGWAGFNGGDPYSANIDSSLAVLNTNICAATSLLVWTCLDVIFFKKPS 300
Query: 301 VIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDDTLG 360
VIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDDTLG
Sbjct: 301 VIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDDTLG 360
Query: 361 VFHTHAVAGFLGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALFIIC 420
VFHTHAVAGFLGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALFIIC
Sbjct: 361 VFHTHAVAGFLGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALFIIC 420
Query: 421 WNVVVTSLVCLAVRAVVPLRMPEEELAIGDDAVHGEEAYALWGDGEKYDSTKHGWYSDNN 480
WNVVVTSLVCLAVRAVVPLRMPEEELAIGDDAVHGEEAYALWGDGEKYDSTKHGWYSDNN
Sbjct: 421 WNVVVTSLVCLAVRAVVPLRMPEEELAIGDDAVHGEEAYALWGDGEKYDSTKHGWYSDNN 480
Query: 481 DTHHNNNKAAPSGVTQNV 498
DTHHNNNKAAPSGVTQNV
Sbjct: 481 DTHHNNNKAAPSGVTQNV 498
>Os02g0550800 Ammonium transporter family protein
Length = 480
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/498 (72%), Positives = 415/498 (83%), Gaps = 18/498 (3%)
Query: 1 MSGDAFNMSVAYQPSGMAVPEWLNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKKWAV 60
M+ A M+ PS P+WLNKGDNAWQM SATLVG+QS+PGLVILYGSIVKKKWA+
Sbjct: 1 MAAGAIPMAYQTTPSS---PDWLNKGDNAWQMTSATLVGLQSMPGLVILYGSIVKKKWAI 57
Query: 61 NSAFMALYAFAAVWLCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYK 120
NSAFMALYAFAAVW+CWV W YNMSFG +LLPFWGKARPALGQSFL+AQ+ L T Y
Sbjct: 58 NSAFMALYAFAAVWICWVVWAYNMSFGDRLLPFWGKARPALGQSFLVAQSELTATAIRYH 117
Query: 121 GGGGADAVVETPWVNPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLT 180
G E P + PLYP+ATMVYFQC+FA+IT+I+LAGSLLGRMNIKAWM FVPLW+T
Sbjct: 118 NGSA-----EAPMLKPLYPVATMVYFQCMFASITIIILAGSLLGRMNIKAWMAFVPLWIT 172
Query: 181 FSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPPNN 240
FSYTV AFSLWGGGFLF WGV+DYSGGYVIHLSSG+AG TAAYWVGPRS DRERFPPNN
Sbjct: 173 FSYTVCAFSLWGGGFLFQWGVIDYSGGYVIHLSSGIAGLTAAYWVGPRSASDRERFPPNN 232
Query: 241 VLLMLTGAGILWMGWAGFNGGDPYSANIDSSLAVLNTNICAATSLLVWTCLDVIFFKKPS 300
+LL+L GAG+LW+GW GFNGGDPYSANIDSS+AVLNT+ICA+TSLLVWT LDV FF KPS
Sbjct: 233 ILLVLAGAGLLWLGWTGFNGGDPYSANIDSSMAVLNTHICASTSLLVWTILDVFFFGKPS 292
Query: 301 VIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDDTLG 360
VIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPW+TMMV+HK+ +Q++DDTLG
Sbjct: 293 VIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWYTMMVLHKKWSFMQRIDDTLG 352
Query: 361 VFHTHAVAGFLGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALFIIC 420
VFHTHAVAGFLGGATTGLFAEP+LCSLFL + +S+GAFY G GG QF +Q+AGALF+
Sbjct: 353 VFHTHAVAGFLGGATTGLFAEPILCSLFLSIPDSKGAFYGGPGGS-QFGKQIAGALFVTA 411
Query: 421 WNVVVTSLVCLAVRAVVPLRMPEEELAIGDDAVHGEEAYALWGDGEKYDSTKHGWYSDNN 480
WN+V+TS++C+ + ++PLR+ ++EL IGDDAVHGEEAYA+W +GE D T H N
Sbjct: 412 WNIVITSIICVIISLILPLRIADQELLIGDDAVHGEEAYAIWAEGELNDMTHH-----NE 466
Query: 481 DTHHNNNKAAPSGVTQNV 498
TH GVTQNV
Sbjct: 467 STH----SGVSVGVTQNV 480
>Os01g0831900 Similar to Ammonium transporter
Length = 501
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/461 (67%), Positives = 368/461 (79%), Gaps = 7/461 (1%)
Query: 12 YQPSGMAVPEWLNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFA 71
Y P AVP WLNKGD AWQ+++AT VG+QS+PGLV++YGSIVKKKWAVNSAFMALYA+A
Sbjct: 14 YMPDLPAVPAWLNKGDTAWQLVAATFVGIQSMPGLVVIYGSIVKKKWAVNSAFMALYAYA 73
Query: 72 AVWLCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVET 131
+ + WV G+ M+FG +LLPFW KA PAL Q FL+ +AV P T + G+D +ET
Sbjct: 74 STLIVWVLVGFRMAFGDRLLPFWAKAGPALTQDFLVQRAVFPATAHY-----GSDGTLET 128
Query: 132 PWVNPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLW 191
P P Y A +V F+ FAAITL+LLAGSLLGRMNIKAWM F PLWL FSYTVGAFSLW
Sbjct: 129 PRTEPFYAEAALVLFEFEFAAITLVLLAGSLLGRMNIKAWMAFTPLWLLFSYTVGAFSLW 188
Query: 192 GGGFLFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPPNNVLLMLTGAGIL 251
GGGFL+ WGV+DYSGGYVIHLSSGVAGFTAAYWVGPR DRERF PNN+LLM+ G G+L
Sbjct: 189 GGGFLYQWGVIDYSGGYVIHLSSGVAGFTAAYWVGPRLKSDRERFSPNNILLMIAGGGLL 248
Query: 252 WMGWAGFNGGDPYSANIDSSLAVLNTNICAATSLLVWTCLDVIFFKKPSVIGAVQGMITG 311
W+GWAGFNGG PY+ N+ +++AVLNTN+ AATSLL WTCLDVIFF KPSVIGAVQGM+TG
Sbjct: 249 WLGWAGFNGGAPYAPNVTATVAVLNTNVSAATSLLTWTCLDVIFFGKPSVIGAVQGMMTG 308
Query: 312 LVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDDTLGVFHTHAVAGFL 371
LVCITPGAGLV W+A++MG+ +GS+PWFTMM++HK+S L +VDDTL VFHTHAVAG L
Sbjct: 309 LVCITPGAGLVHTWSAMLMGMFAGSVPWFTMMILHKKSTFLMKVDDTLAVFHTHAVAGIL 368
Query: 372 GGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALFIICWNVVVTSLVCL 431
GG TGL A P LC+L P+ N RG FY G G G Q +Q+ GALF+ WN++VTS + L
Sbjct: 369 GGVLTGLLATPELCALDCPIPNMRGVFY-GSGIG-QLGKQLGGALFVTVWNLIVTSAILL 426
Query: 432 AVRAVVPLRMPEEELAIGDDAVHGEEAYALWGDGEKYDSTK 472
+ +PLRM +++L IGDDA HGEEAYALWGDGEK+D T+
Sbjct: 427 CIGLFIPLRMSDDQLMIGDDAAHGEEAYALWGDGEKFDVTR 467
>Os05g0468700 Ammonium transporter
Length = 486
Score = 635 bits (1637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/464 (69%), Positives = 376/464 (81%), Gaps = 15/464 (3%)
Query: 11 AYQPSGMAVPEWLNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAF 70
AY S AVP+WLNKGDNAWQ+ ++TLVG+QS+PGLV+LYGSIVKKKWAVNSAFMALYA+
Sbjct: 6 AYSASLPAVPDWLNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAY 65
Query: 71 AAVWLCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVE 130
A+ L WV G+ M+FG +LLPFWGKA AL QS+L+ +A LP T GA
Sbjct: 66 ASSLLVWVLVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAH------GA----- 114
Query: 131 TPWVNPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSL 190
P P YP AT+V FQ FAAITL+LLAGS+LGRMNIKAWM F PLWL SYTVGAFSL
Sbjct: 115 IPRTEPFYPEATLVLFQFEFAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSL 174
Query: 191 WGGGFLFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPPNNVLLMLTGAGI 250
WGGGFL+ WGV+DYSGGYVIHLSSG+AGFTAAYWVGPR DRERF PNN+LLM+ G G+
Sbjct: 175 WGGGFLYRWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFSPNNILLMIAGGGL 234
Query: 251 LWMGWAGFNGGDPYSANIDSSLAVLNTNICAATSLLVWTCLDVIFFKKPSVIGAVQGMIT 310
LWMGWAGFNGG PY+ANI +S+AVLNTN+CAATSLL+WTCLDVIFF+KPSVIGAVQGM+T
Sbjct: 235 LWMGWAGFNGGAPYAANIAASVAVLNTNVCAATSLLMWTCLDVIFFRKPSVIGAVQGMMT 294
Query: 311 GLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDDTLGVFHTHAVAGF 370
GLVCITPGAGLVQ WAA+VMGI +GS+PWFTMM++HK+S LL +VDDTL VFHTHAVAG
Sbjct: 295 GLVCITPGAGLVQTWAAVVMGIFAGSVPWFTMMILHKKSALLMKVDDTLAVFHTHAVAGL 354
Query: 371 LGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGL-QFVRQVAGALFIICWNVVVTSLV 429
LGG TGL A P L SL V RGAFY GGG+ Q +Q+ GA F+I WN+VVT+ +
Sbjct: 355 LGGILTGLLATPELFSLESTVPGLRGAFY---GGGIKQIGKQLGGAAFVIAWNLVVTTAI 411
Query: 430 CLAVRAVVPLRMPEEELAIGDDAVHGEEAYALWGDGEKYDSTKH 473
L + +PLRMP+E+L IGDDA HGEEAYALWGDGEK+D+T+H
Sbjct: 412 LLGIGLFIPLRMPDEQLMIGDDAAHGEEAYALWGDGEKFDATRH 455
>Os12g0105100
Length = 458
Score = 558 bits (1439), Expect = e-159, Method: Compositional matrix adjust.
Identities = 272/447 (60%), Positives = 337/447 (75%), Gaps = 12/447 (2%)
Query: 15 SGMAVPEWLNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVW 74
+ +AVPEWLNKGDNAWQM+SATLV +Q PGL + Y V +K A+ SAFMALYA AA
Sbjct: 2 ASVAVPEWLNKGDNAWQMLSATLVALQGFPGLALFYAGAVTRKCALTSAFMALYAMAATM 61
Query: 75 LCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWV 134
CW W +NM+FGH+LLPF G+ PAL Q ++L QA+LP T + G VET V
Sbjct: 62 PCWALWAHNMAFGHRLLPFVGRPAPALAQHYMLTQALLPFTLHLHSNGE-----VETAAV 116
Query: 135 NPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLWGGG 194
PLYP A+MV+FQ A +T+ L+AG++LGRM++KAWM FVPLW T SYTVGA+S+WGGG
Sbjct: 117 APLYPSASMVFFQWASAGVTVGLVAGAVLGRMSVKAWMAFVPLWTTLSYTVGAYSIWGGG 176
Query: 195 FLFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPP--NNVLLMLTGAGILW 252
FLFHWGVMDYSGGYV+HL++GV+G+TAAYWVGPR ++ E N++ M+ GAGILW
Sbjct: 177 FLFHWGVMDYSGGYVVHLAAGVSGYTAAYWVGPRRKEEEEMTMAGGGNLVAMVAGAGILW 236
Query: 253 MGWAGFNGGDPYSANIDSSLAVLNTNICAATSLLVWTCLDVIFFKKPSVIGAVQGMITGL 312
MGW GFNGGDP+SAN DSS+AVLNT+IC TS+L W C D+ +PSV+GAVQGMITGL
Sbjct: 237 MGWTGFNGGDPFSANTDSSVAVLNTHICTTTSILAWVCCDIAVRGRPSVVGAVQGMITGL 296
Query: 313 VCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDDTLGVFHTHAVAGFLG 372
VCITP AGLVQGWAA++MG+ SG++P +TM + + +VDDTLG+ HTHAV+G LG
Sbjct: 297 VCITPAAGLVQGWAALLMGVASGTLPCYTM-----NAAMSFKVDDTLGILHTHAVSGVLG 351
Query: 373 GATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALFIICWNVVVTSLVCLA 432
G TG+FA P LC +FLPVT SRG Y R GG+Q ++QVA ALF+ WNV TS++ +
Sbjct: 352 GVLTGVFAHPTLCDMFLPVTGSRGLVYGVRAGGVQVLKQVAAALFVAAWNVAATSIILVV 411
Query: 433 VRAVVPLRMPEEELAIGDDAVHGEEAY 459
VRA VPLRM E+EL GD AVHGE+AY
Sbjct: 412 VRAFVPLRMTEDELLAGDIAVHGEQAY 438
>Os03g0838400 Similar to Ammonium transporter
Length = 369
Score = 546 bits (1406), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/350 (78%), Positives = 314/350 (89%), Gaps = 1/350 (0%)
Query: 125 ADAVVETPWVNPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYT 184
AD VET V PLYPMAT+VYFQCVFAAITLIL+AGSLLGRM+ AWM+FVPLWLTFSYT
Sbjct: 11 ADGSVETAAVEPLYPMATVVYFQCVFAAITLILVAGSLLGRMSFLAWMIFVPLWLTFSYT 70
Query: 185 VGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPPNNVLLM 244
VGAFSLWGGGFLFHWGV+DY GGYVIH+S+G+AGFTAAYWVGPR+ KDRERFPPNN+L
Sbjct: 71 VGAFSLWGGGFLFHWGVIDYCGGYVIHVSAGIAGFTAAYWVGPRAQKDRERFPPNNILFT 130
Query: 245 LTGAGILWMGWAGFNGGDPYSANIDSSLAVLNTNICAATSLLVWTCLDVIFFKKPSVIGA 304
LTGAG+LWMGWAGFNGG PY+AN +S+AVLNTNIC A SL+VWTCLDVIFFKKPSV+GA
Sbjct: 131 LTGAGLLWMGWAGFNGGGPYAANSVASMAVLNTNICTAMSLIVWTCLDVIFFKKPSVVGA 190
Query: 305 VQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDDTLGVFHT 364
VQGMITGLVCITP AG+VQGWAA+VMG+L+GSIPW+TMM++HKRS++LQ+VDDTLGVFHT
Sbjct: 191 VQGMITGLVCITPAAGVVQGWAALVMGVLAGSIPWYTMMILHKRSKILQRVDDTLGVFHT 250
Query: 365 HAVAGFLGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALFIICWNVV 424
H VAG LGG TGLFAEP LC+LFLPV +SRGAFY G GG QF +Q+AG LF++ WNV
Sbjct: 251 HGVAGLLGGLLTGLFAEPTLCNLFLPVADSRGAFY-GGAGGAQFGKQIAGGLFVVAWNVA 309
Query: 425 VTSLVCLAVRAVVPLRMPEEELAIGDDAVHGEEAYALWGDGEKYDSTKHG 474
VTSL+CLA+ +VPLRMP+++L +GDDAVHGEEAYALWGDGE YD TKHG
Sbjct: 310 VTSLICLAINLLVPLRMPDDKLEVGDDAVHGEEAYALWGDGEMYDVTKHG 359
>Os11g0105300
Length = 326
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/304 (62%), Positives = 233/304 (76%), Gaps = 9/304 (2%)
Query: 18 AVPEWLNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVWLCW 77
AVPEWLNKGDNAWQM+SATLV +Q PGL + Y V +KWA+ SAFMALYA AA CW
Sbjct: 5 AVPEWLNKGDNAWQMLSATLVALQGFPGLALFYVGAVPRKWALTSAFMALYAMAATMPCW 64
Query: 78 VTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPL 137
W +NM+FG +LLPF G+ PAL Q ++L+QA+LP T G VET V PL
Sbjct: 65 ALWAHNMAFGRRLLPFVGRPAPALAQDYMLSQALLPSTLHLRSNGE-----VETAAVAPL 119
Query: 138 YPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLWGGGFLF 197
YP A+MV+FQ FA +T+ L+AG++LGRM++KAWM FVPLW T SYTVGA+S+WGGGFLF
Sbjct: 120 YPSASMVFFQWAFAGVTVGLVAGAVLGRMSVKAWMAFVPLWTTLSYTVGAYSIWGGGFLF 179
Query: 198 HWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPPN----NVLLMLTGAGILWM 253
HWGVMDYSGGYV+ L++GV+G+TAAYWVGPR ++ E N+++M+ GAGILWM
Sbjct: 180 HWGVMDYSGGYVVLLAAGVSGYTAAYWVGPRRKEEDEEEMATASGGNLVVMVAGAGILWM 239
Query: 254 GWAGFNGGDPYSANIDSSLAVLNTNICAATSLLVWTCLDVIFFKKPSVIGAVQGMITGLV 313
GW GFNGGDP+SAN DSS+AVLNT+ICA TS++ W C DV +PSV+GAVQGMITGLV
Sbjct: 240 GWTGFNGGDPFSANTDSSVAVLNTHICATTSIVAWVCCDVAVRGRPSVVGAVQGMITGLV 299
Query: 314 CITP 317
CITP
Sbjct: 300 CITP 303
>Os01g0831300 Similar to Ammonium transporter
Length = 219
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 169/214 (78%), Gaps = 5/214 (2%)
Query: 12 YQPSGMAVPEWLNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFA 71
Y P AVPEWLN GDN WQ+ +AT VG+QS+PGLV+LYGSIVKKKWAVNSAFMALYA+A
Sbjct: 10 YMPRPPAVPEWLNTGDNGWQLAAATFVGLQSMPGLVVLYGSIVKKKWAVNSAFMALYAYA 69
Query: 72 AVWLCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVET 131
+ + WV G+ M+FG +LLPFWGKA AL + FL+A+A +P T + G D +E+
Sbjct: 70 STLIVWVLVGFRMAFGDRLLPFWGKAGAALTEGFLVARASVPATAHY-----GKDGALES 124
Query: 132 PWVNPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLW 191
P P YP A+MV FQ AAITL+LLAGSLLGRMNIKAWM F PLWL FSYTV AFSLW
Sbjct: 125 PRTEPFYPEASMVLFQFELAAITLVLLAGSLLGRMNIKAWMAFTPLWLLFSYTVCAFSLW 184
Query: 192 GGGFLFHWGVMDYSGGYVIHLSSGVAGFTAAYWV 225
GGGFL+ WGV+DYSGGYVIHLSSG+AGFTAAYWV
Sbjct: 185 GGGFLYQWGVIDYSGGYVIHLSSGIAGFTAAYWV 218
>Os03g0749050
Length = 262
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/266 (53%), Positives = 169/266 (63%), Gaps = 40/266 (15%)
Query: 225 VGPRSTKDRERFPPNNVLLMLTGAGIL-WMGWAGFNGGDPYSANIDSSLAVLNTNICAAT 283
VGPR+ KDRE FPPNNVLL L GAG+L WMGW GFNGG PY+AN+D+S+ V+NT++C AT
Sbjct: 6 VGPRTEKDREAFPPNNVLLTLAGAGLLLWMGWTGFNGGAPYAANVDASVTVVNTHLCTAT 65
Query: 284 SLLVWTCLDVIFFKKPSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMM 343
SLLVW LD F + SVI AVQGMITGLVC+TP A L
Sbjct: 66 SLLVWLLLDSFVFGRLSVISAVQGMITGLVCVTPAARL---------------------- 103
Query: 344 VVHKRSRLLQQVDDTLGVFHTHAVAGFLGGATTG--LFAEPVLCSLFLPVTNSR--GAFY 399
V+HKRSRLL +VDDTL V HTH VAG L G TG L AEP LF + R G Y
Sbjct: 104 VLHKRSRLLARVDDTLAVLHTHGVAGSLSGVLTGLLLLAEPRFARLFFG-DDPRYVGLAY 162
Query: 400 PGR----GGGLQFVR-QVAGALFIICWNVVVTSLVCLAVRAVVPLRMPEEELAIGDDAVH 454
R G GL+ V Q+AG F++ NV VTS VCLAVR VP +LA G DA+H
Sbjct: 163 AVRDGRAGSGLRQVGVQLAGIAFVVALNVAVTSAVCLAVRVAVP------QLAGGGDAIH 216
Query: 455 GEEAYALWGDGEKYDS-TKHGWYSDN 479
GE+AYA+WGDGE Y+ + HG S++
Sbjct: 217 GEDAYAVWGDGETYEQYSVHGGGSNH 242
>Os02g0620500 Similar to Ammonium transporter Amt1
Length = 498
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 182/494 (36%), Gaps = 67/494 (13%)
Query: 27 DNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVWLCWVTWGYNMSF 86
D + + SA LV + G +L V+ K ++N + AA L + +G+ +F
Sbjct: 37 DATYLLFSAYLVFAMQL-GFAMLCAGSVRAKNSMNIMLTNVLDAAAGALFYYLFGFAFAF 95
Query: 87 GHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLYPMATMVYF 146
G F GK Q F L +PQT Y F
Sbjct: 96 GTPSKGFIGK------QFFGLKH--MPQTGYDYD----------------------FFLF 125
Query: 147 QCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLWG-----------GGF 195
Q FA + +GS+ R A++++ F Y V + W G
Sbjct: 126 QWAFAIAAAGITSGSIAERTRFSAYLIYSAFLTGFVYPVVSHWFWSTDGWASAGRLTGPL 185
Query: 196 LFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPR-----STKDRERFPPNNVLLMLTGAGI 250
LF GV+D++G V+HL G+AG A+ GPR + ++ L++ G +
Sbjct: 186 LFKSGVIDFAGSGVVHLVGGIAGLWGAFIEGPRIGRFDAAGRTVAMKGHSASLVVLGTFL 245
Query: 251 LWMGWAGFNGGD--------PYSANIDSSLAVLNTNICAATSLLVWTCLDVIFFKK---- 298
LW GW GFN G S ID + + + L ++ K+
Sbjct: 246 LWFGWFGFNPGSFTTISKIYGESGTIDGQWSAVGRTAVTTSLAGSVAALTTLYGKRWLTG 305
Query: 299 -PSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDD 357
+V G++ G IT G +V WA+++ G +S W +++ + L+ + DD
Sbjct: 306 HWNVTDVCNGLLGGFAAITAGCSVVDPWASVICGFVS---AW--VLIGCNKLSLILKFDD 360
Query: 358 TLGVFHTHAVAGFLGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALF 417
L HA G G T LFA L V + G GGG + L
Sbjct: 361 PLEATQLHAGCGAWGIIFTALFARREYVELIYGVPGRPYGLFMG-GGGRLLAAHIVQILV 419
Query: 418 IICWNVVVTSLVCLAVRAVVPLRM-PEEELAIGDDAVHGEEAYALWGDGEKYDSTKHGWY 476
I+ W + + LR+ P E+ D HG Y +GE+ K
Sbjct: 420 IVGWVSATMGTLFYVLHRFGLLRVSPATEMEGMDPTCHGGFGYVDEDEGERRVRAKSAAE 479
Query: 477 SDNNDTHHNNNKAA 490
+ + + +AA
Sbjct: 480 TARVEPRKSPEQAA 493
>Os02g0620600 Ammonium transporter family protein
Length = 496
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 175/468 (37%), Gaps = 67/468 (14%)
Query: 27 DNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVWLCWVTWGYNMSF 86
D+ + + SA LV + G +L V+ K +N + AA L + +G+ +F
Sbjct: 35 DSTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAF 93
Query: 87 GHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLYPMATMVYF 146
G F GK L Q +PQ Y + F
Sbjct: 94 GAPSNGFIGKHFFGLKQ--------VPQVGFDY----------------------SFFLF 123
Query: 147 QCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLWG-----------GGF 195
Q FA + +GS+ R A++++ F Y V + +W G
Sbjct: 124 QWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWSADGWASASRTSGSL 183
Query: 196 LFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTK-----DRERFPPNNVLLMLTGAGI 250
LF GV+D++G V+H+ GVAG A GPR + ++ L++ G+ +
Sbjct: 184 LFGSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRSVALRGHSASLVVLGSFL 243
Query: 251 LWMGWAGFNGGDPYS--------ANIDSSLAVLNTNICAATSLLVWTCLDVIFFKKP--- 299
LW GW GFN G + +I + + T L +F K+
Sbjct: 244 LWFGWYGFNPGSFLTILKSYGPPGSIHGQWSAVGRTAVTTTLAGSTAALTTLFGKRLQTG 303
Query: 300 --SVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDD 357
+VI G++ G IT G +V WAAI+ G +S W + + +RL + DD
Sbjct: 304 HWNVIDVCNGLLGGFAAITAGCSVVDPWAAIICGFVS---AWVLIGLNALAARL--KFDD 358
Query: 358 TLGVFHTHAVAGFLGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALF 417
L H G G T LFA + G GGG + L
Sbjct: 359 PLEAAQLHGGCGAWGVIFTALFARKEYVDQIFGQPGRPYGLFMG-GGGRLLGAHIVVILV 417
Query: 418 IICWNVVVTSLVCLAVRAVVPLRMP-EEELAIGDDAVHGEEAYALWGD 464
I W + + L + + LR+ E+E+A D HG AYA D
Sbjct: 418 IAAWVSFTMAPLFLVLNKLGLLRISAEDEMAGMDQTRHGGFAYAYHDD 465
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.138 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,413,962
Number of extensions: 884678
Number of successful extensions: 2158
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 2136
Number of HSP's successfully gapped: 11
Length of query: 498
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 393
Effective length of database: 11,553,331
Effective search space: 4540459083
Effective search space used: 4540459083
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 158 (65.5 bits)