Os05g0468700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ammonium transporter.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0468700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ammonium transporter.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.37 | 0.405 | 11.7 | 0.552 | 2.43 | 0.337 | 0.892 | -1.82 | 0.639 | 16.5 | 10.64 | 1456 | -- | -- |
| 77.39 | 0.413 | 11.8 | 0.357 | 2.65 | 0.52 | 1.04 | -- | 0.522 | 15.8 | 20 | 1468 | -- | -- |
| 76.27 | 0.407 | 11.7 | 0.563 | 2.44 | 0.328 | -- | -2.02 | 0.636 | 16.4 | 10.82 | 1513 | -- | -- |
| 80.54 | 0.421 | 11.8 | 0.371 | 2.64 | 0.491 | -- | -- | 0.528 | 15.9 | 19.99 | 1530 | -- | -- |
| 269.57 | 0.765 | 11.4 | 0.844 | -- | -1.78 | -- | -2.96 | 0.413 | -- | 1.817 | 3447 | -- | -- |
| 82.42 | 0.426 | 11.8 | 0.351 | 2.41 | -- | 0.974 | -- | 0.523 | 16.5 | -- | -- | -- | -- |
| 84.96 | 0.432 | 11.8 | 0.358 | 2.42 | -- | -- | -- | 0.528 | 16.5 | -- | -- | -- | -- |
| 93.75 | 0.451 | 11.8 | 0.136 | -- | -2.49 | -- | -- | 0.371 | -- | 2.605 | 575 | -- | -- |
| 84.15 | 0.43 | 11.8 | -- | 2.62 | 0.477 | -- | -- | 0.487 | 15.9 | 19.99 | 1530 | -- | -- |
| 397.4 | 0.931 | 11.7 | 0.264 | -- | -- | -- | -- | 0.464 | -- | -- | -- | -- | -- |
| 88.33 | 0.44 | 11.8 | -- | 2.41 | -- | -- | -- | 0.488 | 16.6 | -- | -- | -- | -- |
| 93.14 | 0.449 | 11.8 | -- | -- | -2.51 | -- | -- | 0.403 | -- | 0.17 | 583 | -- | -- |
| 399.24 | 0.933 | 11.7 | -- | -- | -- | -- | -- | 0.435 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.53 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 2 | 72.40 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 3 | 72.48 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 7 |
| 10 | 73.31 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 14 | 73.61 | humidity | 90 | 30 | < th | dose dependent | rect. | 20 | 18 |
| 19 | 73.80 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 20 | 73.81 | radiation | 10 | 1440 | < th | dose dependent | sin | 0 | NA |
| 24 | 73.91 | humidity | 90 | 10 | < th | dose dependent | rect. | 20 | 20 |
| 25 | 73.91 | humidity | 50 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 27 | 73.97 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 29 | 73.97 | radiation | 20 | 10 | < th | dose dependent | rect. | 23 | 21 |
| 31 | 74.00 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 2 |
| 33 | 74.04 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 47 | 74.18 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 54 | 74.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 2 |
| 60 | 74.21 | radiation | 10 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 62 | 74.21 | radiation | 10 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 69 | 74.23 | radiation | 10 | 1440 | < th | dose dependent | rect. | 7 | 18 |
| 82 | 74.27 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 97 | 74.30 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 103 | 74.32 | radiation | 10 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 104 | 74.32 | radiation | 10 | 1440 | < th | dose dependent | rect. | 24 | 17 |
| 115 | 74.34 | humidity | 70 | 90 | > th | dose dependent | rect. | 23 | 16 |
| 122 | 74.34 | radiation | 10 | 1440 | < th | dose dependent | rect. | 20 | 21 |
| 148 | 74.39 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 208 | 74.44 | radiation | 10 | 1440 | < th | dose dependent | no | NA | NA |
| 221 | 74.44 | radiation | 10 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 257 | 74.50 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 13 |
| 294 | 74.56 | temperature | 15 | 10 | > th | dose independent | rect. | 20 | 16 |
| 300 | 74.56 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 465 | 74.72 | humidity | 80 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 495 | 74.79 | humidity | 60 | 90 | > th | dose dependent | rect. | 23 | 10 |
| 515 | 74.84 | humidity | 70 | 90 | > th | dose dependent | rect. | 23 | 12 |
| 517 | 74.85 | humidity | 60 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 524 | 74.89 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 531 | 74.92 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 541 | 74.94 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 544 | 74.94 | humidity | 90 | 30 | < th | dose dependent | rect. | 3 | 11 |
| 548 | 74.95 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 551 | 74.95 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 558 | 74.96 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 559 | 74.96 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 572 | 74.98 | radiation | 20 | 90 | < th | dose independent | rect. | 23 | 21 |
| 573 | 74.98 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 576 | 74.99 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 584 | 75.00 | humidity | 90 | 30 | < th | dose dependent | rect. | 7 | 7 |
| 591 | 75.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 607 | 75.03 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 619 | 75.05 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 621 | 75.05 | humidity | 90 | 10 | < th | dose dependent | sin | 4 | NA |
| 625 | 75.05 | humidity | 50 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 630 | 75.06 | humidity | 60 | 10 | > th | dose dependent | rect. | 1 | 16 |
| 643 | 75.09 | radiation | 10 | 1440 | > th | dose independent | sin | 4 | NA |
| 728 | 75.22 | radiation | 20 | 10 | < th | dose dependent | rect. | 7 | 13 |
| 746 | 75.24 | radiation | 20 | 10 | < th | dose dependent | rect. | 1 | 19 |
| 756 | 75.26 | radiation | 20 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 759 | 75.26 | radiation | 20 | 1440 | < th | dose independent | rect. | 4 | 13 |
| 764 | 75.26 | radiation | 20 | 1440 | < th | dose independent | rect. | 2 | 18 |
| 772 | 75.26 | radiation | 20 | 1440 | < th | dose independent | rect. | 19 | 22 |
| 778 | 75.27 | radiation | 20 | 1440 | < th | dose independent | no | NA | NA |
| 782 | 75.27 | radiation | 10 | 1440 | < th | dose independent | rect. | 9 | 9 |
| 816 | 75.27 | radiation | 20 | 1440 | < th | dose independent | rect. | 6 | 21 |
| 836 | 75.28 | radiation | 20 | 1440 | < th | dose independent | sin | 23 | NA |
| 838 | 75.28 | radiation | 40 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 886 | 75.28 | radiation | 40 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 925 | 75.30 | humidity | 90 | 10 | < th | dose independent | rect. | 20 | 16 |
| 926 | 75.30 | humidity | 90 | 10 | < th | dose independent | rect. | 20 | 18 |
| 940 | 75.31 | radiation | 20 | 1440 | < th | dose independent | rect. | 3 | 11 |
| 952 | 75.32 | radiation | 20 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 958 | 75.32 | radiation | 20 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 968 | 75.33 | radiation | 20 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 981 | 75.34 | radiation | 10 | 1440 | < th | dose independent | rect. | 9 | 11 |