BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0468700 Os05g0468700|AB051864
(486 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38290.1 | chr2:16039672-16042291 REVERSE LENGTH=476 593 e-170
AT3G24300.1 | chr3:8805858-8807354 REVERSE LENGTH=499 59 5e-09
AT4G13510.1 | chr4:7858220-7859725 FORWARD LENGTH=502 54 2e-07
AT3G24290.1 | chr3:8801400-8802890 REVERSE LENGTH=497 53 3e-07
AT1G64780.1 | chr1:24061021-24062565 REVERSE LENGTH=515 53 4e-07
AT4G28700.1 | chr4:14161681-14163195 FORWARD LENGTH=505 50 3e-06
>AT2G38290.1 | chr2:16039672-16042291 REVERSE LENGTH=476
Length = 475
Score = 593 bits (1529), Expect = e-170, Method: Compositional matrix adjust.
Identities = 306/474 (64%), Positives = 355/474 (74%), Gaps = 11/474 (2%)
Query: 14 VPDWLNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWV 73
VP+WLNKGDNAWQLTA+TLVG+QSMPGLV+LY SIVKKKWAVNSAFMALYA+A+ LL WV
Sbjct: 12 VPEWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWV 71
Query: 74 LVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAHGAIPRTEPFYPEATLVLFQFE 133
L+ ++MAFG++LLPFWGK G A Q YL G+A +P + A P++P ATLV FQF
Sbjct: 72 LLCYKMAFGEELLPFWGKGGPAFDQGYLKGQAKIPNSNVAA-----PYFPMATLVYFQFT 126
Query: 134 FAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWGGGFLYRWGVIDYSGGYV 193
FAAIT +L+AGSVLGRMNIKAWMAF PLWL+ SYTVGA+S+WGGGFLY+WGVIDYSGGYV
Sbjct: 127 FAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSIWGGGFLYQWGVIDYSGGYV 186
Query: 194 IHLSSGIAGFTAAYWVGPRLKSDRERFSPNNXXXXXXXXXXXXXXXXXFNGGAPYAANIA 253
IHLSSG+AGF AAYWVGPR K+DRERF PNN FNGGAPYAAN+
Sbjct: 187 IHLSSGVAGFVAAYWVGPRPKADRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANLT 246
Query: 254 ASVAVLNTNVCAATSLLMWTCLDVIFFRKPSVIGAVQGMMTGLVCITPGAGLVQTWAAVV 313
+S+AVLNTN+ AATSLL+WT LDVIFF KPSVIGA+QGM+TGL +TPGAGL+QTWAA++
Sbjct: 247 SSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGVTPGAGLIQTWAAII 306
Query: 314 MGIFAGSVPWFTMMILHKKSALLMKVDDTLAVFHTHAVAXXXXXXXXXXXATPELFSLES 373
+G+ +G+ PW +MMI+HKKSALL KVDDTLAVF+THAVA A P+L L
Sbjct: 307 IGVVSGTAPWASMMIIHKKSALLQKVDDTLAVFYTHAVAGLLGGIMTGLFAHPDLCVLVL 366
Query: 374 TVPGLRGAFY-XXXXXXXXXXXXXAAFVIAWNLVVTTAILLGIGLFIPLRMPDEQLMIGD 432
+P RGAFY AAF+ WN+V TT ILL I +FIPLRM +E+L IGD
Sbjct: 367 PLPATRGAFYGGNGGKQLLKQLAGAAFIAVWNVVSTTIILLAIRVFIPLRMAEEELGIGD 426
Query: 433 DAAHGEEAYALWGDGEKFDATRHDLSXXXXXXXXXXPAGERLSALGARGVTIQL 486
DAAHGEEAYALWGDGEKFDATRH A GARGVTI L
Sbjct: 427 DAAHGEEAYALWGDGEKFDATRH-----VQQFERDQEAAHPSYVHGARGVTIVL 475
>AT3G24300.1 | chr3:8805858-8807354 REVERSE LENGTH=499
Length = 498
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 124/360 (34%), Gaps = 61/360 (16%)
Query: 22 DNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWVLVGFRMAF 81
DN + L ++ LV + G +L V+ K +N + A+ L + L G+ AF
Sbjct: 46 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAF 104
Query: 82 GDQLLPFWGKAGVALTQSYLVGRATLPATAHGAIPRTEPFYPEATLVLFQFEFAAITLVL 141
G F G+ AL P Y + L+Q+ FA +
Sbjct: 105 GGSSEGFIGRHNFALRD----------------FPTPTADY---SFFLYQWAFAIAAAGI 145
Query: 142 LAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLW-----------GGGFLYRWGVIDYSG 190
+GS+ R A++ ++ Y V + W L+ G ID++G
Sbjct: 146 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASPFRSADDRLFSTGAIDFAG 205
Query: 191 GYVIHLSSGIAGFTAAYWVGPRLKSDRERFSPNNXXXXXXXXXXXXXXXXXF-------- 242
V+H+ GIAG A GPR R RF F
Sbjct: 206 SGVVHMVGGIAGLWGALIEGPR----RGRFEKGGRAIALRGHSASLVVLGTFLLWFGWYG 261
Query: 243 -------------NGGAPYAANIAASVAVLNTNVCAATSLLMWTCLDVIFFRKPSVIGAV 289
N G+ Y +NT + T+ L + +V
Sbjct: 262 FNPGSFTKILVPYNSGSNYGQWSGIGRTAVNTTLSGCTAALTTLFGKRLLSGHWNVTDVC 321
Query: 290 QGMMTGLVCITPGAGLVQTWAAVVMGIFAGSVPWFTMMILHKKSALLMKVDDTLAVFHTH 349
G++ G IT G +V+ WAA+V G A V +I K A L++ DD L H
Sbjct: 322 NGLLGGFAAITAGCSVVEPWAAIVCGFMASVV-----LIGCNKLAELVQYDDPLEAAQLH 376
>AT4G13510.1 | chr4:7858220-7859725 FORWARD LENGTH=502
Length = 501
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 149/468 (31%), Gaps = 64/468 (13%)
Query: 22 DNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWVLVGFRMAF 81
DN + L ++ LV G +L V+ K +N + A+ L + L G+ AF
Sbjct: 42 DNTYLLFSAYLV-FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAF 100
Query: 82 GDQLLPFWGKAGVALTQSYLVGRATLPATAHGAIPRTEPFYPEATLVLFQFEFAAITLVL 141
G F GK L IP Y L+Q+ FA +
Sbjct: 101 GSPSNGFIGKHYFGLKD----------------IPTASADYSN---FLYQWAFAIAAAGI 141
Query: 142 LAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWG-----------GGFLYRWGVIDYSG 190
+GS+ R A++ ++ Y V + W G L+ G ID++G
Sbjct: 142 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASPFRTDGDLLFSTGAIDFAG 201
Query: 191 GYVIHLSSGIAGFTAAYWVGPRLKSDRERFSPNNXXXXXXXXXXXXXXXXX--------- 241
V+H+ GIAG A GPRL RF
Sbjct: 202 SGVVHMVGGIAGLWGALIEGPRLG----RFDNGGRAIALRGHSASLVVLGTFLLWFGWYG 257
Query: 242 FNGGAPYAANIAASVAVLNTN------VCAATSLLMWTCLDVIFFRKP------SVIGAV 289
FN G+ + N T+L T F K +V
Sbjct: 258 FNPGSFNKILVTYETGTYNGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLSGHWNVTDVC 317
Query: 290 QGMMTGLVCITPGAGLVQTWAAVVMGIFAGSVPWFTMMILHKKSALLMKVDDTLAVFHTH 349
G++ G IT G +V+ WAA++ G A V ++ K A +K DD L H
Sbjct: 318 NGLLGGFAAITGGCSVVEPWAAIICGFVAALV-----LLGCNKLAEKLKYDDPLEAAQLH 372
Query: 350 AVAXXXXXXXXXXXATPE-LFSLESTVPGL-RGAFYXXXXXXXXXXXXXAAFVIAWNLVV 407
A + L + PG G F + W
Sbjct: 373 GGCGAWGLIFTALFAQEKYLNQIYGNKPGRPHGLFMGGGGKLLGAQLIQIIVITGWVSAT 432
Query: 408 TTAILLGIGLFIPLRMPDEQLMIG-DDAAHGEEAYALWGDGEKFDATR 454
+ + LR+ E M G D HG AY + D E A +
Sbjct: 433 MGTLFFILKKMKLLRISSEDEMAGMDMTRHGGFAYMYFDDDESHKAIQ 480
>AT3G24290.1 | chr3:8801400-8802890 REVERSE LENGTH=497
Length = 496
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 122/359 (33%), Gaps = 60/359 (16%)
Query: 22 DNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWVLVGFRMAF 81
DN + L ++ LV + G +L V+ K +N + A+ L + L G+ AF
Sbjct: 46 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAF 104
Query: 82 GDQLLPFWGKAGVALTQSYLVGRATLPATAHGAIPRTEPFYPEATLVLFQFEFAAITLVL 141
G+ F G+ L P Y + L+Q+ FA +
Sbjct: 105 GESSDGFIGRHNFGLQN----------------FPTLTSDY---SFFLYQWAFAIAAAGI 145
Query: 142 LAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWG----------GGFLYRWGVIDYSGG 191
+GS+ R A++ ++ Y V + W L+ G ID++G
Sbjct: 146 TSGSIAERTKFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASPFRSEDRLFGTGAIDFAGS 205
Query: 192 YVIHLSSGIAGFTAAYWVGPRLKSDRERFSPNNXXXXXXXXXXXXXXXXXF--------- 242
V+H+ GIAG A GPR+ RF F
Sbjct: 206 GVVHMVGGIAGLWGALIEGPRIG----RFPDGGHAIALRGHSASLVVLGTFLLWFGWYGF 261
Query: 243 ------------NGGAPYAANIAASVAVLNTNVCAATSLLMWTCLDVIFFRKPSVIGAVQ 290
N G+ Y + T + T+ L + +V
Sbjct: 262 NPGSFTKILIPYNSGSNYGQWSGIGRTAVTTTLSGCTAALTTLFGKRLLSGHWNVTDVCN 321
Query: 291 GMMTGLVCITPGAGLVQTWAAVVMGIFAGSVPWFTMMILHKKSALLMKVDDTLAVFHTH 349
G++ G IT G +V WAA+V G A V +I K A L+K DD L H
Sbjct: 322 GLLGGFAAITAGCSVVDPWAAIVCGFVASLV-----LIGCNKLAELLKYDDPLEAAQLH 375
>AT1G64780.1 | chr1:24061021-24062565 REVERSE LENGTH=515
Length = 514
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 155/461 (33%), Gaps = 72/461 (15%)
Query: 22 DNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWVLVGFRMAF 81
DN + L ++ LV + G +L V+ K +N + A+ + + L GF AF
Sbjct: 52 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVLDAAAGAISYYLFGFAFAF 110
Query: 82 GDQLLPFWGKAGVALTQSYLVGRATLPATAHGAIPRTEPF-----YPEA-----TLVLFQ 131
G ++G I R F YPE + L+Q
Sbjct: 111 G--------------------------TPSNGFIGRHHSFFALSSYPERPGSDFSFFLYQ 144
Query: 132 FEFAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWG-----------GGFL 180
+ FA + +GS+ R A++ ++ Y + W L
Sbjct: 145 WAFAIAAAGITSGSIAERTQFVAYLIYSTFLTGFVYPTVSHWFWSSDGWASASRSDNNLL 204
Query: 181 YRWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRL-KSDRERFS----PNNXXXXXXXXXXX 235
+ G ID++G V+H+ GIAG A GPR+ + DR S ++
Sbjct: 205 FGSGAIDFAGSGVVHMVGGIAGLCGALVEGPRIGRFDRSGRSVALRGHSASLVVLGTFLL 264
Query: 236 XXXXXXFNGGA------------PYAAN-IAASVAVLNTNVCAATSLLMWTCLDVIFFRK 282
FN G+ PY A + T + T+ L +
Sbjct: 265 WFGWYGFNPGSFLTILKGYDKSRPYYGQWSAVGRTAVTTTLSGCTAALTTLFSKRLLAGH 324
Query: 283 PSVIGAVQGMMTGLVCITPGAGLVQTWAAVVMGIFAGSVPWFTMMILHKKSALLMKVDDT 342
+VI G++ G IT G +V+ WAA+V G F S +L KK +K DD
Sbjct: 325 WNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCG-FVASWVLIGFNLLAKK----LKYDDP 379
Query: 343 LAVFHTHAVAXXXXXXXXXXXATPELFSLESTVPGLRGAFYXXXXXXXXXXXXXAAFVIA 402
L H A E + + G F ++
Sbjct: 380 LEAAQLHGGCGAWGLIFTGLFARKEYVNEIYSGDRPYGLFMGGGGKLLAAQIVQIIVIVG 439
Query: 403 WNLVVTTAILLGIGLFIPLRMPDEQLMIG-DDAAHGEEAYA 442
W V + G+ LR+ E M G D HG AYA
Sbjct: 440 WVTVTMGPLFYGLHKMNLLRISAEDEMAGMDMTRHGGFAYA 480
>AT4G28700.1 | chr4:14161681-14163195 FORWARD LENGTH=505
Length = 504
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 128/360 (35%), Gaps = 59/360 (16%)
Query: 22 DNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWVLVGFRMAF 81
DN + L ++ LV + G +L V+ K +N + A+ L + L GF AF
Sbjct: 51 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVIDAAAGGLFYYLFGFAFAF 109
Query: 82 GDQLLPFWGKAGVALTQSYLVGRATLPATAHGAIPRTEPFYPEATLVLFQFEFAAITLVL 141
G F GK + G P P + YP L+Q+ FA +
Sbjct: 110 GSPSNGFIGK--------HFFGMYDFPQ------PTFD--YP---YFLYQWTFAIAAAGI 150
Query: 142 LAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWGG----------GFLYRWGVIDYSGG 191
+GS+ R A++ ++ L Y + + W L++ GVID++G
Sbjct: 151 TSGSIAERTQFVAYLIYSSFLTGLVYPIVSHWFWSSDGWASPARSENLLFQSGVIDFAGS 210
Query: 192 YVIHLSSGIAGFTAAYWVGPRLKSDRERFSPNNXXXXXXXXXXXXXXXXXFN-------- 243
V+H+ GIAG A GPR+ P F
Sbjct: 211 GVVHMVGGIAGLWGALIEGPRIGRFGVGGKPVTLRGHSATLVVLGTFLLWFGWYGFNPGS 270
Query: 244 --------GGAPYAANIAASVAVLNTNVCAATSLLMWTCLDVIFFRKP------SVIGAV 289
G P ++ AV T V T+L T F K +V
Sbjct: 271 FATIFKAYGETPGSSFYGQWSAVGRTAV--TTTLAGCTAALTTLFGKRLIDGYWNVTDVC 328
Query: 290 QGMMTGLVCITPGAGLVQTWAAVVMGIFAGSVPWFTMMILHKKSALLMKVDDTLAVFHTH 349
G++ G IT G +V+ WAA+V G A W M + A ++ DD L H
Sbjct: 329 NGLLGGFAAITSGCSVVEPWAALVCGFVA---AWVLMGC--NRLAEKLQFDDPLEAAQLH 383
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.138 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,012,718
Number of extensions: 339812
Number of successful extensions: 773
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 765
Number of HSP's successfully gapped: 6
Length of query: 486
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 384
Effective length of database: 8,310,137
Effective search space: 3191092608
Effective search space used: 3191092608
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 114 (48.5 bits)