BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0468700 Os05g0468700|AB051864
(486 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0468700 Ammonium transporter 827 0.0
Os01g0831900 Similar to Ammonium transporter 686 0.0
Os01g0870300 Ammonium transporter 583 e-167
Os02g0550800 Ammonium transporter family protein 563 e-161
Os03g0838400 Similar to Ammonium transporter 422 e-118
Os12g0105100 412 e-115
Os01g0831300 Similar to Ammonium transporter 342 5e-94
Os11g0105300 321 7e-88
Os03g0749050 159 4e-39
>Os05g0468700 Ammonium transporter
Length = 486
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/473 (89%), Positives = 422/473 (89%)
Query: 14 VPDWLNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWV 73
VPDWLNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWV
Sbjct: 14 VPDWLNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWV 73
Query: 74 LVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAHGAIPRTEPFYPEATLVLFQFE 133
LVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAHGAIPRTEPFYPEATLVLFQFE
Sbjct: 74 LVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAHGAIPRTEPFYPEATLVLFQFE 133
Query: 134 FAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWGGGFLYRWGVIDYSGGYV 193
FAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWGGGFLYRWGVIDYSGGYV
Sbjct: 134 FAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWGGGFLYRWGVIDYSGGYV 193
Query: 194 IHLSSGIAGFTAAYWVGPRLKSDRERFSPNNXXXXXXXXXXXXXXXXXFNGGAPYAANIA 253
IHLSSGIAGFTAAYWVGPRLKSDRERFSPNN FNGGAPYAANIA
Sbjct: 194 IHLSSGIAGFTAAYWVGPRLKSDRERFSPNNILLMIAGGGLLWMGWAGFNGGAPYAANIA 253
Query: 254 ASVAVLNTNVCAATSLLMWTCLDVIFFRKPSVIGAVQGMMTGLVCITPGAGLVQTWAAVV 313
ASVAVLNTNVCAATSLLMWTCLDVIFFRKPSVIGAVQGMMTGLVCITPGAGLVQTWAAVV
Sbjct: 254 ASVAVLNTNVCAATSLLMWTCLDVIFFRKPSVIGAVQGMMTGLVCITPGAGLVQTWAAVV 313
Query: 314 MGIFAGSVPWFTMMILHKKSALLMKVDDTLAVFHTHAVAXXXXXXXXXXXATPELFSLES 373
MGIFAGSVPWFTMMILHKKSALLMKVDDTLAVFHTHAVA ATPELFSLES
Sbjct: 314 MGIFAGSVPWFTMMILHKKSALLMKVDDTLAVFHTHAVAGLLGGILTGLLATPELFSLES 373
Query: 374 TVPGLRGAFYXXXXXXXXXXXXXAAFVIAWNLVVTTAILLGIGLFIPLRMPDEQLMIGDD 433
TVPGLRGAFY AAFVIAWNLVVTTAILLGIGLFIPLRMPDEQLMIGDD
Sbjct: 374 TVPGLRGAFYGGGIKQIGKQLGGAAFVIAWNLVVTTAILLGIGLFIPLRMPDEQLMIGDD 433
Query: 434 AAHGEEAYALWGDGEKFDATRHDLSXXXXXXXXXXPAGERLSALGARGVTIQL 486
AAHGEEAYALWGDGEKFDATRHDLS PAGERLSALGARGVTIQL
Sbjct: 434 AAHGEEAYALWGDGEKFDATRHDLSRGGGGGDRDGPAGERLSALGARGVTIQL 486
>Os01g0831900 Similar to Ammonium transporter
Length = 501
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/481 (73%), Positives = 381/481 (79%), Gaps = 8/481 (1%)
Query: 14 VPDWLNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWV 73
VP WLNKGD AWQL A+T VGIQSMPGLVV+YGSIVKKKWAVNSAFMALYAYAS+L+VWV
Sbjct: 21 VPAWLNKGDTAWQLVAATFVGIQSMPGLVVIYGSIVKKKWAVNSAFMALYAYASTLIVWV 80
Query: 74 LVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAHGA------IPRTEPFYPEATL 127
LVGFRMAFGD+LLPFW KAG ALTQ +LV RA PATAH PRTEPFY EA L
Sbjct: 81 LVGFRMAFGDRLLPFWAKAGPALTQDFLVQRAVFPATAHYGSDGTLETPRTEPFYAEAAL 140
Query: 128 VLFQFEFAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWGGGFLYRWGVID 187
VLF+FEFAAITLVLLAGS+LGRMNIKAWMAFTPLWLL SYTVGAFSLWGGGFLY+WGVID
Sbjct: 141 VLFEFEFAAITLVLLAGSLLGRMNIKAWMAFTPLWLLFSYTVGAFSLWGGGFLYQWGVID 200
Query: 188 YSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFSPNNXXXXXXXXXXXXXXXXXFNGGAP 247
YSGGYVIHLSSG+AGFTAAYWVGPRLKSDRERFSPNN FNGGAP
Sbjct: 201 YSGGYVIHLSSGVAGFTAAYWVGPRLKSDRERFSPNNILLMIAGGGLLWLGWAGFNGGAP 260
Query: 248 YAANIAASVAVLNTNVCAATSLLMWTCLDVIFFRKPSVIGAVQGMMTGLVCITPGAGLVQ 307
YA N+ A+VAVLNTNV AATSLL WTCLDVIFF KPSVIGAVQGMMTGLVCITPGAGLV
Sbjct: 261 YAPNVTATVAVLNTNVSAATSLLTWTCLDVIFFGKPSVIGAVQGMMTGLVCITPGAGLVH 320
Query: 308 TWAAVVMGIFAGSVPWFTMMILHKKSALLMKVDDTLAVFHTHAVAXXXXXXXXXXXATPE 367
TW+A++MG+FAGSVPWFTMMILHKKS LMKVDDTLAVFHTHAVA ATPE
Sbjct: 321 TWSAMLMGMFAGSVPWFTMMILHKKSTFLMKVDDTLAVFHTHAVAGILGGVLTGLLATPE 380
Query: 368 LFSLESTVPGLRGAFYXXXXXXXXXXXXXAAFVIAWNLVVTTAILLGIGLFIPLRMPDEQ 427
L +L+ +P +RG FY A FV WNL+VT+AILL IGLFIPLRM D+Q
Sbjct: 381 LCALDCPIPNMRGVFYGSGIGQLGKQLGGALFVTVWNLIVTSAILLCIGLFIPLRMSDDQ 440
Query: 428 LMIGDDAAHGEEAYALWGDGEKFDATRHDLSXXXXXXXXXXP--AGERLSALGARGVTIQ 485
LMIGDDAAHGEEAYALWGDGEKFD TR + + +RL+ +GARGVTIQ
Sbjct: 441 LMIGDDAAHGEEAYALWGDGEKFDVTRPETTRTGGAGGAGREDTMEQRLTNMGARGVTIQ 500
Query: 486 L 486
L
Sbjct: 501 L 501
>Os01g0870300 Ammonium transporter
Length = 498
Score = 583 bits (1503), Expect = e-167, Method: Compositional matrix adjust.
Identities = 295/455 (64%), Positives = 341/455 (74%), Gaps = 13/455 (2%)
Query: 14 VPDWLNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWV 73
VP+WLNKGDNAWQ+ ++TLVG+QS+PGLV+LYGSIVKKKWAVNSAFMALYA+A+ L WV
Sbjct: 19 VPEWLNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVWLCWV 78
Query: 74 LVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAH------GA-----IPRTEPFY 122
G+ M+FG +LLPFWGKA AL QS+L+ +A LP T GA P P Y
Sbjct: 79 TWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLY 138
Query: 123 PEATLVLFQFEFAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWGGGFLYR 182
P AT+V FQ FAAITL+LLAGS+LGRMNIKAWM F PLWL SYTVGAFSLWGGGFL+
Sbjct: 139 PMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLWGGGFLFH 198
Query: 183 WGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFSPNNXXXXXXXXXXXXXXXXXF 242
WGV+DYSGGYVIHLSSG+AGFTAAYWVGPR DRERF PNN F
Sbjct: 199 WGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPPNNVLLMLTGAGILWMGWAGF 258
Query: 243 NGGAPYAANIAASVAVLNTNVCAATSLLMWTCLDVIFFRKPSVIGAVQGMMTGLVCITPG 302
NGG PY+ANI +S+AVLNTN+CAATSLL+WTCLDVIFF+KPSVIGAVQGM+TGLVCITPG
Sbjct: 259 NGGDPYSANIDSSLAVLNTNICAATSLLVWTCLDVIFFKKPSVIGAVQGMITGLVCITPG 318
Query: 303 AGLVQTWAAVVMGIFAGSVPWFTMMILHKKSALLMKVDDTLAVFHTHAVAXXXXXXXXXX 362
AGLVQ WAA+VMGI +GS+PWFTMM++HK+S LL +VDDTL VFHTHAVA
Sbjct: 319 AGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDDTLGVFHTHAVAGFLGGATTGL 378
Query: 363 XATPELFSLESTVPGLRGAFYXXXXXXXXXXXXXAA--FVIAWNLVVTTAILLGIGLFIP 420
A P L SL V RGAFY A F+I WN+VVT+ + L + +P
Sbjct: 379 FAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALFIICWNVVVTSLVCLAVRAVVP 438
Query: 421 LRMPDEQLMIGDDAAHGEEAYALWGDGEKFDATRH 455
LRMP+E+L IGDDA HGEEAYALWGDGEK+D+T+H
Sbjct: 439 LRMPEEELAIGDDAVHGEEAYALWGDGEKYDSTKH 473
>Os02g0550800 Ammonium transporter family protein
Length = 480
Score = 563 bits (1451), Expect = e-161, Method: Compositional matrix adjust.
Identities = 281/451 (62%), Positives = 339/451 (75%), Gaps = 7/451 (1%)
Query: 15 PDWLNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWVL 74
PDWLNKGDNAWQ+T++TLVG+QSMPGLV+LYGSIVKKKWA+NSAFMALYA+A+ + WV+
Sbjct: 17 PDWLNKGDNAWQMTSATLVGLQSMPGLVILYGSIVKKKWAINSAFMALYAFAAVWICWVV 76
Query: 75 VGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATA------HGAIPRTEPFYPEATLV 128
+ M+FGD+LLPFWGKA AL QS+LV ++ L ATA P +P YP AT+V
Sbjct: 77 WAYNMSFGDRLLPFWGKARPALGQSFLVAQSELTATAIRYHNGSAEAPMLKPLYPVATMV 136
Query: 129 LFQFEFAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWGGGFLYRWGVIDY 188
FQ FA+IT+++LAGS+LGRMNIKAWMAF PLW+ SYTV AFSLWGGGFL++WGVIDY
Sbjct: 137 YFQCMFASITIIILAGSLLGRMNIKAWMAFVPLWITFSYTVCAFSLWGGGFLFQWGVIDY 196
Query: 189 SGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFSPNNXXXXXXXXXXXXXXXXXFNGGAPY 248
SGGYVIHLSSGIAG TAAYWVGPR SDRERF PNN FNGG PY
Sbjct: 197 SGGYVIHLSSGIAGLTAAYWVGPRSASDRERFPPNNILLVLAGAGLLWLGWTGFNGGDPY 256
Query: 249 AANIAASVAVLNTNVCAATSLLMWTCLDVIFFRKPSVIGAVQGMMTGLVCITPGAGLVQT 308
+ANI +S+AVLNT++CA+TSLL+WT LDV FF KPSVIGAVQGM+TGLVCITPGAGLVQ
Sbjct: 257 SANIDSSMAVLNTHICASTSLLVWTILDVFFFGKPSVIGAVQGMITGLVCITPGAGLVQG 316
Query: 309 WAAVVMGIFAGSVPWFTMMILHKKSALLMKVDDTLAVFHTHAVAXXXXXXXXXXXATPEL 368
WAA+VMGI +GS+PW+TMM+LHKK + + ++DDTL VFHTHAVA A P L
Sbjct: 317 WAAIVMGILSGSIPWYTMMVLHKKWSFMQRIDDTLGVFHTHAVAGFLGGATTGLFAEPIL 376
Query: 369 FSLESTVPGLRGAFYXXXXXXXXXXXXXAA-FVIAWNLVVTTAILLGIGLFIPLRMPDEQ 427
SL ++P +GAFY A FV AWN+V+T+ I + I L +PLR+ D++
Sbjct: 377 CSLFLSIPDSKGAFYGGPGGSQFGKQIAGALFVTAWNIVITSIICVIISLILPLRIADQE 436
Query: 428 LMIGDDAAHGEEAYALWGDGEKFDATRHDLS 458
L+IGDDA HGEEAYA+W +GE D T H+ S
Sbjct: 437 LLIGDDAVHGEEAYAIWAEGELNDMTHHNES 467
>Os03g0838400 Similar to Ammonium transporter
Length = 369
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/354 (61%), Positives = 254/354 (71%), Gaps = 3/354 (0%)
Query: 105 ATLPATAHGAIPR--TEPFYPEATLVLFQFEFAAITLVLLAGSVLGRMNIKAWMAFTPLW 162
AT+ A G++ EP YP AT+V FQ FAAITL+L+AGS+LGRM+ AWM F PLW
Sbjct: 5 ATVHYRADGSVETAAVEPLYPMATVVYFQCVFAAITLILVAGSLLGRMSFLAWMIFVPLW 64
Query: 163 LLLSYTVGAFSLWGGGFLYRWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFSP 222
L SYTVGAFSLWGGGFL+ WGVIDY GGYVIH+S+GIAGFTAAYWVGPR + DRERF P
Sbjct: 65 LTFSYTVGAFSLWGGGFLFHWGVIDYCGGYVIHVSAGIAGFTAAYWVGPRAQKDRERFPP 124
Query: 223 NNXXXXXXXXXXXXXXXXXFNGGAPYAANIAASVAVLNTNVCAATSLLMWTCLDVIFFRK 282
NN FNGG PYAAN AS+AVLNTN+C A SL++WTCLDVIFF+K
Sbjct: 125 NNILFTLTGAGLLWMGWAGFNGGGPYAANSVASMAVLNTNICTAMSLIVWTCLDVIFFKK 184
Query: 283 PSVIGAVQGMMTGLVCITPGAGLVQTWAAVVMGIFAGSVPWFTMMILHKKSALLMKVDDT 342
PSV+GAVQGM+TGLVCITP AG+VQ WAA+VMG+ AGS+PW+TMMILHK+S +L +VDDT
Sbjct: 185 PSVVGAVQGMITGLVCITPAAGVVQGWAALVMGVLAGSIPWYTMMILHKRSKILQRVDDT 244
Query: 343 LAVFHTHAVAXXXXXXXXXXXATPELFSLESTVPGLRGAFYXXXXXXXXXXXXXAA-FVI 401
L VFHTH VA A P L +L V RGAFY FV+
Sbjct: 245 LGVFHTHGVAGLLGGLLTGLFAEPTLCNLFLPVADSRGAFYGGAGGAQFGKQIAGGLFVV 304
Query: 402 AWNLVVTTAILLGIGLFIPLRMPDEQLMIGDDAAHGEEAYALWGDGEKFDATRH 455
AWN+ VT+ I L I L +PLRMPD++L +GDDA HGEEAYALWGDGE +D T+H
Sbjct: 305 AWNVAVTSLICLAINLLVPLRMPDDKLEVGDDAVHGEEAYALWGDGEMYDVTKH 358
>Os12g0105100
Length = 458
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/438 (49%), Positives = 284/438 (64%), Gaps = 15/438 (3%)
Query: 14 VPDWLNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWV 73
VP+WLNKGDNAWQ+ ++TLV +Q PGL + Y V +K A+ SAFMALYA A+++ W
Sbjct: 6 VPEWLNKGDNAWQMLSATLVALQGFPGLALFYAGAVTRKCALTSAFMALYAMAATMPCWA 65
Query: 74 LVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAH----GAIPR--TEPFYPEATL 127
L MAFG +LLPF G+ AL Q Y++ +A LP T H G + P YP A++
Sbjct: 66 LWAHNMAFGHRLLPFVGRPAPALAQHYMLTQALLPFTLHLHSNGEVETAAVAPLYPSASM 125
Query: 128 VLFQFEFAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWGGGFLYRWGVID 187
V FQ+ A +T+ L+AG+VLGRM++KAWMAF PLW LSYTVGA+S+WGGGFL+ WGV+D
Sbjct: 126 VFFQWASAGVTVGLVAGAVLGRMSVKAWMAFVPLWTTLSYTVGAYSIWGGGFLFHWGVMD 185
Query: 188 YSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERF--SPNNXXXXXXXXXXXXXXXXXFNGG 245
YSGGYV+HL++G++G+TAAYWVGPR K + E N FNGG
Sbjct: 186 YSGGYVVHLAAGVSGYTAAYWVGPRRKEEEEMTMAGGGNLVAMVAGAGILWMGWTGFNGG 245
Query: 246 APYAANIAASVAVLNTNVCAATSLLMWTCLDVIFFRKPSVIGAVQGMMTGLVCITPGAGL 305
P++AN +SVAVLNT++C TS+L W C D+ +PSV+GAVQGM+TGLVCITP AGL
Sbjct: 246 DPFSANTDSSVAVLNTHICTTTSILAWVCCDIAVRGRPSVVGAVQGMITGLVCITPAAGL 305
Query: 306 VQTWAAVVMGIFAGSVPWFTMMILHKKSALLMKVDDTLAVFHTHAVAXXXXXXXXXXXAT 365
VQ WAA++MG+ +G++P +TM +A+ KVDDTL + HTHAV+ A
Sbjct: 306 VQGWAALLMGVASGTLPCYTM-----NAAMSFKVDDTLGILHTHAVSGVLGGVLTGVFAH 360
Query: 366 PELFSLESTVPGLRGAFYXXXXXXXXXXXXXAA--FVIAWNLVVTTAILLGIGLFIPLRM 423
P L + V G RG Y AA FV AWN+ T+ IL+ + F+PLRM
Sbjct: 361 PTLCDMFLPVTGSRGLVYGVRAGGVQVLKQVAAALFVAAWNVAATSIILVVVRAFVPLRM 420
Query: 424 PDEQLMIGDDAAHGEEAY 441
+++L+ GD A HGE+AY
Sbjct: 421 TEDELLAGDIAVHGEQAY 438
>Os01g0831300 Similar to Ammonium transporter
Length = 219
Score = 342 bits (876), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 171/202 (84%), Positives = 186/202 (92%), Gaps = 6/202 (2%)
Query: 14 VPDWLNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWV 73
VP+WLN GDN WQL A+T VG+QSMPGLVVLYGSIVKKKWAVNSAFMALYAYAS+L+VWV
Sbjct: 17 VPEWLNTGDNGWQLAAATFVGLQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASTLIVWV 76
Query: 74 LVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAH----GAI--PRTEPFYPEATL 127
LVGFRMAFGD+LLPFWGKAG ALT+ +LV RA++PATAH GA+ PRTEPFYPEA++
Sbjct: 77 LVGFRMAFGDRLLPFWGKAGAALTEGFLVARASVPATAHYGKDGALESPRTEPFYPEASM 136
Query: 128 VLFQFEFAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWGGGFLYRWGVID 187
VLFQFE AAITLVLLAGS+LGRMNIKAWMAFTPLWLL SYTV AFSLWGGGFLY+WGVID
Sbjct: 137 VLFQFELAAITLVLLAGSLLGRMNIKAWMAFTPLWLLFSYTVCAFSLWGGGFLYQWGVID 196
Query: 188 YSGGYVIHLSSGIAGFTAAYWV 209
YSGGYVIHLSSGIAGFTAAYWV
Sbjct: 197 YSGGYVIHLSSGIAGFTAAYWV 218
>Os11g0105300
Length = 326
Score = 321 bits (823), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 162/311 (52%), Positives = 215/311 (69%), Gaps = 10/311 (3%)
Query: 14 VPDWLNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWV 73
VP+WLNKGDNAWQ+ ++TLV +Q PGL + Y V +KWA+ SAFMALYA A+++ W
Sbjct: 6 VPEWLNKGDNAWQMLSATLVALQGFPGLALFYVGAVPRKWALTSAFMALYAMAATMPCWA 65
Query: 74 LVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAH----GAIPR--TEPFYPEATL 127
L MAFG +LLPF G+ AL Q Y++ +A LP+T H G + P YP A++
Sbjct: 66 LWAHNMAFGRRLLPFVGRPAPALAQDYMLSQALLPSTLHLRSNGEVETAAVAPLYPSASM 125
Query: 128 VLFQFEFAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWGGGFLYRWGVID 187
V FQ+ FA +T+ L+AG+VLGRM++KAWMAF PLW LSYTVGA+S+WGGGFL+ WGV+D
Sbjct: 126 VFFQWAFAGVTVGLVAGAVLGRMSVKAWMAFVPLWTTLSYTVGAYSIWGGGFLFHWGVMD 185
Query: 188 YSGGYVIHLSSGIAGFTAAYWVGPRLKSDRER----FSPNNXXXXXXXXXXXXXXXXXFN 243
YSGGYV+ L++G++G+TAAYWVGPR K + E S N FN
Sbjct: 186 YSGGYVVLLAAGVSGYTAAYWVGPRRKEEDEEEMATASGGNLVVMVAGAGILWMGWTGFN 245
Query: 244 GGAPYAANIAASVAVLNTNVCAATSLLMWTCLDVIFFRKPSVIGAVQGMMTGLVCITPGA 303
GG P++AN +SVAVLNT++CA TS++ W C DV +PSV+GAVQGM+TGLVCITP +
Sbjct: 246 GGDPFSANTDSSVAVLNTHICATTSIVAWVCCDVAVRGRPSVVGAVQGMITGLVCITPRS 305
Query: 304 GLVQTWAAVVM 314
+ ++ VV+
Sbjct: 306 NIKYSFLLVVI 316
>Os03g0749050
Length = 262
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 127/254 (50%), Gaps = 39/254 (15%)
Query: 209 VGPRLKSDRERFSPNNXXXXXXXXXXXXXXX-XXFNGGAPYAANIAASVAVLNTNVCAAT 267
VGPR + DRE F PNN FNGGAPYAAN+ ASV V+NT++C AT
Sbjct: 6 VGPRTEKDREAFPPNNVLLTLAGAGLLLWMGWTGFNGGAPYAANVDASVTVVNTHLCTAT 65
Query: 268 SLLMWTCLDVIFFRKPSVIGAVQGMMTGLVCITPGAGLVQTWAAVVMGIFAGSVPWFTMM 327
SLL+W LD F + SVI AVQGM+TGLVC+TP A LV
Sbjct: 66 SLLVWLLLDSFVFGRLSVISAVQGMITGLVCVTPAARLV--------------------- 104
Query: 328 ILHKKSALLMKVDDTLAVFHTHAVAXXXXXXXXXXXATPE------LFSLESTVPGL--- 378
LHK+S LL +VDDTLAV HTH VA E F + GL
Sbjct: 105 -LHKRSRLLARVDDTLAVLHTHGVAGSLSGVLTGLLLLAEPRFARLFFGDDPRYVGLAYA 163
Query: 379 -RGAFYXXXXXXXXXXXXXAAFVIAWNLVVTTAILLGIGLFIPLRMPDEQLMIGDDAAHG 437
R AFV+A N+ VT+A+ L + + +P QL G DA HG
Sbjct: 164 VRDGRAGSGLRQVGVQLAGIAFVVALNVAVTSAVCLAVRVAVP------QLAGGGDAIHG 217
Query: 438 EEAYALWGDGEKFD 451
E+AYA+WGDGE ++
Sbjct: 218 EDAYAVWGDGETYE 231
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.138 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,801,519
Number of extensions: 574521
Number of successful extensions: 1367
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1348
Number of HSP's successfully gapped: 9
Length of query: 486
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 381
Effective length of database: 11,553,331
Effective search space: 4401819111
Effective search space used: 4401819111
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 158 (65.5 bits)