Os01g0870300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ammonium transporter.
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Os01g0870300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ammonium transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.91 | 0.376 | 9.67 | 1.77 | 0.726 | 0.537 | 0.193 | 0.661 | 0.465 | 3.51 | 80 | 756 | -- | -- |
| 64.82 | 0.375 | 9.67 | 1.73 | 0.708 | 0.538 | 0.236 | -- | 0.453 | 3.44 | 79.85 | 774 | -- | -- |
| 64 | 0.373 | 9.67 | 1.77 | 0.714 | 0.546 | -- | 0.662 | 0.463 | 3.53 | 80 | 773 | -- | -- |
| 64.92 | 0.375 | 9.67 | 1.71 | 0.708 | 0.546 | -- | -- | 0.453 | 3.55 | 79.8 | 774 | -- | -- |
| 81.66 | 0.421 | 9.67 | 1.88 | -- | 0.936 | -- | 0.313 | 0.471 | -- | 78.81 | 1061 | -- | -- |
| 70.64 | 0.394 | 9.68 | 1.76 | 0.694 | -- | 0.332 | -- | 0.476 | 1.75 | -- | -- | -- | -- |
| 71.06 | 0.395 | 9.68 | 1.75 | 0.695 | -- | -- | -- | 0.474 | 1.84 | -- | -- | -- | -- |
| 80.88 | 0.419 | 9.71 | 1.81 | -- | 0.865 | -- | -- | 0.398 | -- | 83 | 1088 | -- | -- |
| 139.15 | 0.549 | 9.73 | -- | 0.564 | 0.836 | -- | -- | 0.209 | 2.38 | 76 | 1191 | -- | -- |
| 100.32 | 0.468 | 9.67 | 1.77 | -- | -- | -- | -- | 0.49 | -- | -- | -- | -- | -- |
| 151.39 | 0.576 | 9.72 | -- | 0.727 | -- | -- | -- | 0.28 | 1.9 | -- | -- | -- | -- |
| 155.6 | 0.581 | 9.73 | -- | -- | 1.19 | -- | -- | 0.211 | -- | 75.94 | 1142 | -- | -- |
| 183.35 | 0.632 | 9.71 | -- | -- | -- | -- | -- | 0.293 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 59.94 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 10 |
| 3 | 60.02 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 13 |
| 4 | 60.08 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 6 | 60.08 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 15 | 60.39 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 16 | 60.41 | temperature | 20.0 | 90 | > th | dose independent | sin | 4 | NA |
| 18 | 60.42 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 19 | 60.51 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 32 | 60.74 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 40 | 60.94 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 11 |
| 42 | 60.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 47 | 61.02 | temperature | 20.0 | 90 | < th | dose independent | sin | 4 | NA |
| 61 | 61.17 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 76 | 61.32 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 78 | 61.34 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 3 | 12 |
| 84 | 61.37 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 96 | 61.43 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 111 | 61.49 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 140 | 61.72 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 154 | 61.81 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 172 | 61.87 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 8 |
| 187 | 61.91 | humidity | 80.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 190 | 61.94 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 5 |
| 201 | 61.99 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 20 |
| 211 | 62.03 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 18 |
| 272 | 62.19 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 308 | 62.28 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 16 |
| 317 | 62.30 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 15 |
| 330 | 62.34 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 4 | 10 |
| 353 | 62.40 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 361 | 62.41 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 386 | 62.45 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 393 | 62.47 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 394 | 62.47 | wind | 9.0 | 4320 | < th | dose independent | rect. | 5 | 6 |
| 408 | 62.50 | wind | 9.0 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 413 | 62.51 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 10 |
| 417 | 62.51 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 425 | 62.53 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 437 | 62.55 | wind | 9.0 | 4320 | > th | dose independent | rect. | 1 | 12 |
| 443 | 62.55 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 19 |
| 450 | 62.56 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 451 | 62.56 | humidity | 80.0 | 720 | < th | dose independent | rect. | 18 | 14 |
| 479 | 62.59 | wind | 9.0 | 4320 | > th | dose independent | rect. | 21 | 16 |
| 488 | 62.61 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 509 | 62.64 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 522 | 62.65 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 5 | 6 |
| 597 | 62.76 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 611 | 62.78 | temperature | 25.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 619 | 62.79 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 11 |
| 627 | 62.80 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 640 | 62.82 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 664 | 62.82 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 24 | 13 |
| 675 | 62.85 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 687 | 62.86 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 16 | NA |
| 688 | 62.86 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 696 | 62.87 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 703 | 62.88 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 710 | 62.89 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 721 | 62.90 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 724 | 62.90 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 4 | 9 |
| 734 | 62.91 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 9 |
| 792 | 62.97 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 837 | 63.01 | temperature | 20.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 910 | 63.06 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 4 | 14 |
| 941 | 63.08 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 943 | 63.08 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 11 |
| 944 | 63.09 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 955 | 63.10 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 964 | 63.11 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 965 | 63.11 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 978 | 63.12 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 1 |