BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0870300 Os01g0870300|AK120352
(498 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38290.1 | chr2:16039672-16042291 REVERSE LENGTH=476 646 0.0
AT3G24300.1 | chr3:8805858-8807354 REVERSE LENGTH=499 89 6e-18
AT4G13510.1 | chr4:7858220-7859725 FORWARD LENGTH=502 79 6e-15
AT1G64780.1 | chr1:24061021-24062565 REVERSE LENGTH=515 78 1e-14
AT3G24290.1 | chr3:8801400-8802890 REVERSE LENGTH=497 77 1e-14
AT4G28700.1 | chr4:14161681-14163195 FORWARD LENGTH=505 76 5e-14
>AT2G38290.1 | chr2:16039672-16042291 REVERSE LENGTH=476
Length = 475
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/489 (67%), Positives = 384/489 (78%), Gaps = 18/489 (3%)
Query: 8 MSVAYQPSGMAVPEWLNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMAL 67
M+ AY PS VPEWLNKGDNAWQ+ +ATLVG+QS+PGLVILY SIVKKKWAVNSAFMAL
Sbjct: 1 MAGAYDPSLPEVPEWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMAL 60
Query: 68 YAFAAVWLCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADA 127
YAFAAV LCWV Y M+FG +LLPFWGK PA Q +L QA +P +
Sbjct: 61 YAFAAVLLCWVLLCYKMAFGEELLPFWGKGGPAFDQGYLKGQAKIPNSNV---------- 110
Query: 128 VVETPWVNPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGA 187
P +PMAT+VYFQ FAAIT IL+AGS+LGRMNIKAWM FVPLWL FSYTVGA
Sbjct: 111 ------AAPYFPMATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSYTVGA 164
Query: 188 FSLWGGGFLFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPPNNVLLMLTG 247
+S+WGGGFL+ WGV+DYSGGYVIHLSSGVAGF AAYWVGPR DRERFPPNNVLLML G
Sbjct: 165 YSIWGGGFLYQWGVIDYSGGYVIHLSSGVAGFVAAYWVGPRPKADRERFPPNNVLLMLAG 224
Query: 248 AGILWMGWAGFNGGDPYSANIDSSLAVLNTNICAATSLLVWTCLDVIFFKKPSVIGAVQG 307
AG+LWMGW+GFNGG PY+AN+ SS+AVLNTN+ AATSLLVWT LDVIFF KPSVIGA+QG
Sbjct: 225 AGLLWMGWSGFNGGAPYAANLTSSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQG 284
Query: 308 MITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDDTLGVFHTHAV 367
M+TGL +TPGAGL+Q WAAI++G++SG+ PW +MM++HK+S LLQ+VDDTL VF+THAV
Sbjct: 285 MVTGLAGVTPGAGLIQTWAAIIIGVVSGTAPWASMMIIHKKSALLQKVDDTLAVFYTHAV 344
Query: 368 AGFLGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALFIICWNVVVTS 427
AG LGG TGLFA P LC L LP+ +RGAFY G GG Q ++Q+AGA FI WNVV T+
Sbjct: 345 AGLLGGIMTGLFAHPDLCVLVLPLPATRGAFYGGNGGK-QLLKQLAGAAFIAVWNVVSTT 403
Query: 428 LVCLAVRAVVPLRMPEEELAIGDDAVHGEEAYALWGDGEKYDSTKH-GWYSDNNDTHHNN 486
++ LA+R +PLRM EEEL IGDDA HGEEAYALWGDGEK+D+T+H + + + H +
Sbjct: 404 IILLAIRVFIPLRMAEEELGIGDDAAHGEEAYALWGDGEKFDATRHVQQFERDQEAAHPS 463
Query: 487 NKAAPSGVT 495
GVT
Sbjct: 464 YVHGARGVT 472
>AT3G24300.1 | chr3:8805858-8807354 REVERSE LENGTH=499
Length = 498
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 184/498 (36%), Gaps = 88/498 (17%)
Query: 27 DNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVWLCWVTWGYNMSF 86
DN + + SA LV + G +L V+ K +N + AA L + +GY +F
Sbjct: 46 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAF 104
Query: 87 GHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLYPMATMVYF 146
G F G+ AL P T Y + +
Sbjct: 105 GGSSEGFIGRHNFALRD--------FPTPTADY----------------------SFFLY 134
Query: 147 QCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLW-----------GGGF 195
Q FA + +GS+ R A++++ F Y V + W
Sbjct: 135 QWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASPFRSADDR 194
Query: 196 LFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPP---------NNVLLMLT 246
LF G +D++G V+H+ G+AG A GPR R RF ++ L++
Sbjct: 195 LFSTGAIDFAGSGVVHMVGGIAGLWGALIEGPR----RGRFEKGGRAIALRGHSASLVVL 250
Query: 247 GAGILWMGWAGFNGGD------PYSANIDS------SLAVLNTNICAATSLLVWTCLDVI 294
G +LW GW GFN G PY++ + +NT + T+ L +
Sbjct: 251 GTFLLWFGWYGFNPGSFTKILVPYNSGSNYGQWSGIGRTAVNTTLSGCTAALTTLFGKRL 310
Query: 295 FFKKPSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQ 354
+V G++ G IT G +V+ WAAIV G ++ + ++ +K + L+ Q
Sbjct: 311 LSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFMASVV----LIGCNKLAELV-Q 365
Query: 355 VDDTLGVFHTHAVAGFLGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAG 414
DD L H G G GLFA+ + T R GGG Q+
Sbjct: 366 YDDPLEAAQLHGGCGAWGLIFVGLFAKEKYLNEVYGATPGRPYGLFMGGGGKLLGAQLVQ 425
Query: 415 ALFIICWNVVVTSLVCLAVRAVVPLRMPEEELAIGDDAV-HGEEAYALWGDGEKYDSTKH 473
L I+ W + ++ + LR+ E+ G D HG AY
Sbjct: 426 ILVIVGWVSATMGTLFFILKRLNLLRISEQHEMQGMDMTRHGGFAYI------------- 472
Query: 474 GWYSDNNDTHHNNNKAAP 491
Y DN+D H + +P
Sbjct: 473 --YHDNDDESHRVDPGSP 488
>AT4G13510.1 | chr4:7858220-7859725 FORWARD LENGTH=502
Length = 501
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 180/476 (37%), Gaps = 67/476 (14%)
Query: 27 DNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVWLCWVTWGYNMSF 86
DN + + SA LV + G +L V+ K +N + AA L + +GY +F
Sbjct: 42 DNTYLLFSAYLVFSMQL-GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAF 100
Query: 87 GHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLYPMATMVYF 146
G F GK L +P + Y N LY
Sbjct: 101 GSPSNGFIGKHYFGLKD--------IPTASADYS--------------NFLY-------- 130
Query: 147 QCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLWG-----------GGF 195
Q FA + +GS+ R A++++ F Y V + W G
Sbjct: 131 QWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASPFRTDGDL 190
Query: 196 LFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRE-----RFPPNNVLLMLTGAGI 250
LF G +D++G V+H+ G+AG A GPR + ++ L++ G +
Sbjct: 191 LFSTGAIDFAGSGVVHMVGGIAGLWGALIEGPRLGRFDNGGRAIALRGHSASLVVLGTFL 250
Query: 251 LWMGWAGFNGGDPYSANIDSSLAVLNTNICAATSLLVWT-------CLDVIFFKKP---- 299
LW GW GFN G + N A V T L +F K+
Sbjct: 251 LWFGWYGFNPGSFNKILVTYETGTYNGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLSGH 310
Query: 300 -SVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDDT 358
+V G++ G IT G +V+ WAAI+ G ++ + ++ +K + L + DD
Sbjct: 311 WNVTDVCNGLLGGFAAITGGCSVVEPWAAIICGFVAALV----LLGCNKLAEKL-KYDDP 365
Query: 359 LGVFHTHAVAGFLGGATTGLFA-EPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALF 417
L H G G T LFA E L ++ + G GGG Q+ +
Sbjct: 366 LEAAQLHGGCGAWGLIFTALFAQEKYLNQIYGNKPGRPHGLFMG-GGGKLLGAQLIQIIV 424
Query: 418 IICWNVVVTSLVCLAVRAVVPLRM-PEEELAIGDDAVHGEEAYALWGDGEKYDSTK 472
I W + ++ + LR+ E+E+A D HG AY + D E + + +
Sbjct: 425 ITGWVSATMGTLFFILKKMKLLRISSEDEMAGMDMTRHGGFAYMYFDDDESHKAIQ 480
>AT1G64780.1 | chr1:24061021-24062565 REVERSE LENGTH=515
Length = 514
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 113/496 (22%), Positives = 185/496 (37%), Gaps = 66/496 (13%)
Query: 27 DNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVWLCWVTWGYNMSF 86
DN + + SA LV + G +L V+ K +N + AA + + +G+ +F
Sbjct: 52 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVLDAAAGAISYYLFGFAFAF 110
Query: 87 GHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLYPMATMVYF 146
G F G+ A + P+ G+D + +
Sbjct: 111 GTPSNGFIGRHHS------FFALSSYPERP-------GSDF--------------SFFLY 143
Query: 147 QCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLWGG-----------GF 195
Q FA + +GS+ R A++++ F Y + W
Sbjct: 144 QWAFAIAAAGITSGSIAERTQFVAYLIYSTFLTGFVYPTVSHWFWSSDGWASASRSDNNL 203
Query: 196 LFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTK-DRE----RFPPNNVLLMLTGAGI 250
LF G +D++G V+H+ G+AG A GPR + DR ++ L++ G +
Sbjct: 204 LFGSGAIDFAGSGVVHMVGGIAGLCGALVEGPRIGRFDRSGRSVALRGHSASLVVLGTFL 263
Query: 251 LWMGWAGFNGGD------------PYSANIDS-SLAVLNTNICAATSLLVWTCLDVIFFK 297
LW GW GFN G PY + + T + T+ L +
Sbjct: 264 LWFGWYGFNPGSFLTILKGYDKSRPYYGQWSAVGRTAVTTTLSGCTAALTTLFSKRLLAG 323
Query: 298 KPSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDD 357
+VI G++ G IT G +V+ WAAIV G ++ W + +L + DD
Sbjct: 324 HWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVA---SWVLIGFNLLAKKL--KYDD 378
Query: 358 TLGVFHTHAVAGFLGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALF 417
L H G G TGLFA + G F GGG Q+ +
Sbjct: 379 PLEAAQLHGGCGAWGLIFTGLFARKEYVNEIYSGDRPYGLFMG--GGGKLLAAQIVQIIV 436
Query: 418 IICWNVVVTSLVCLAVRAVVPLRMP-EEELAIGDDAVHGEEAYALWGDGEKYDSTKHGWY 476
I+ W V + + + LR+ E+E+A D HG AYA + D + + G +
Sbjct: 437 IVGWVTVTMGPLFYGLHKMNLLRISAEDEMAGMDMTRHGGFAYA-YNDEDDVSTKPWGHF 495
Query: 477 SDNNDTHHNNNKAAPS 492
+ + ++ P+
Sbjct: 496 AGRVEPTSRSSTPTPT 511
>AT3G24290.1 | chr3:8801400-8802890 REVERSE LENGTH=497
Length = 496
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 116/487 (23%), Positives = 181/487 (37%), Gaps = 87/487 (17%)
Query: 27 DNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVWLCWVTWGYNMSF 86
DN + + SA LV + G +L V+ K +N + AA L + +GY +F
Sbjct: 46 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAF 104
Query: 87 GHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLYPMATMVYF 146
G F G+ L Q+F P T Y + +
Sbjct: 105 GESSDGFIGRHNFGL-QNF-------PTLTSDY----------------------SFFLY 134
Query: 147 QCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLWG----------GGFL 196
Q FA + +GS+ R A++++ F Y V + W L
Sbjct: 135 QWAFAIAAAGITSGSIAERTKFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASPFRSEDRL 194
Query: 197 FHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPP---------NNVLLMLTG 247
F G +D++G V+H+ G+AG A GPR RFP ++ L++ G
Sbjct: 195 FGTGAIDFAGSGVVHMVGGIAGLWGALIEGPR----IGRFPDGGHAIALRGHSASLVVLG 250
Query: 248 AGILWMGWAGFNGGD------PYSANIDSS------LAVLNTNICAATSLLVWTCLDVIF 295
+LW GW GFN G PY++ + + T + T+ L +
Sbjct: 251 TFLLWFGWYGFNPGSFTKILIPYNSGSNYGQWSGIGRTAVTTTLSGCTAALTTLFGKRLL 310
Query: 296 FKKPSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQV 355
+V G++ G IT G +V WAAIV G ++ + ++ +K + LL+
Sbjct: 311 SGHWNVTDVCNGLLGGFAAITAGCSVVDPWAAIVCGFVASLV----LIGCNKLAELLKY- 365
Query: 356 DDTLGVFHTHAVAGFLGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGA 415
DD L H G G GLFA+ + + R GGG Q+
Sbjct: 366 DDPLEAAQLHGGCGAWGLIFVGLFAKEKYINEVYGASPGRHYGLFMGGGGKLLGAQLVQI 425
Query: 416 LFIICWNVVVTSLVCLAVRAVVPLRMPEEELAIGDD-AVHGEEAYALWGDGEKYDSTKHG 474
+ I+ W + ++ + LR+ E+ G D A HG AY
Sbjct: 426 IVIVGWVSATMGTLFFILKKLNLLRISEQHEMRGMDLAGHGGFAYI-------------- 471
Query: 475 WYSDNND 481
Y DN+D
Sbjct: 472 -YHDNDD 477
>AT4G28700.1 | chr4:14161681-14163195 FORWARD LENGTH=505
Length = 504
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 172/466 (36%), Gaps = 71/466 (15%)
Query: 27 DNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVWLCWVTWGYNMSF 86
DN + + SA LV + G +L V+ K +N + AA L + +G+ +F
Sbjct: 51 DNTYLLFSAYLVFAMQL-GFAMLCAGSVRAKNTMNIMLTNVIDAAAGGLFYYLFGFAFAF 109
Query: 87 GHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLYPMATMVYF 146
G F GK PQ T Y P + +
Sbjct: 110 GSPSNGFIGK--------HFFGMYDFPQPTFDY----------------PYF------LY 139
Query: 147 QCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLWGG----------GFL 196
Q FA + +GS+ R A++++ Y + + W L
Sbjct: 140 QWTFAIAAAGITSGSIAERTQFVAYLIYSSFLTGLVYPIVSHWFWSSDGWASPARSENLL 199
Query: 197 FHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPP-----NNVLLMLTGAGIL 251
F GV+D++G V+H+ G+AG A GPR + P ++ L++ G +L
Sbjct: 200 FQSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFGVGGKPVTLRGHSATLVVLGTFLL 259
Query: 252 WMGWAGFNGG------DPYSANIDSSL-----AVLNTNICAATSLLVWTCLDVIFFKKPS 300
W GW GFN G Y SS AV T + T+L T F K
Sbjct: 260 WFGWYGFNPGSFATIFKAYGETPGSSFYGQWSAVGRTAV--TTTLAGCTAALTTLFGKRL 317
Query: 301 VIG------AVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQ 354
+ G G++ G IT G +V+ WAA+V G ++ W M +L Q
Sbjct: 318 IDGYWNVTDVCNGLLGGFAAITSGCSVVEPWAALVCGFVAA---WVLMGCNRLAEKL--Q 372
Query: 355 VDDTLGVFHTHAVAGFLGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAG 414
DD L H G G TGLFAE + +R GGG V
Sbjct: 373 FDDPLEAAQLHGGCGAWGIIFTGLFAEKRYIAEIFGGDPNRPFGLLMGGGGRLLAAHVVQ 432
Query: 415 ALFIICWNVVVTSLVCLAVRAVVPLRMP-EEELAIGDDAVHGEEAY 459
L I W V + + + LR+P E+E+A D HG AY
Sbjct: 433 ILVITGWVSVTMGTLFFILHKLKLLRIPAEDEIAGVDPTSHGGLAY 478
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.138 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,798,935
Number of extensions: 519960
Number of successful extensions: 1395
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1376
Number of HSP's successfully gapped: 6
Length of query: 498
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 395
Effective length of database: 8,282,721
Effective search space: 3271674795
Effective search space used: 3271674795
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 114 (48.5 bits)