BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0748000 Os01g0748000|Os01g0748000
(855 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0748000 Dynamin family protein 1614 0.0
AK103720 1019 0.0
Os12g0178700 Similar to Dynamin-like protein 177 2e-44
Os10g0567800 Similar to Dynamin-related protein 1E (Dynamin... 99 1e-20
AK110298 98 3e-20
Os09g0572900 Similar to Dynamin-related protein 1E (Dynamin... 95 3e-19
Os03g0260000 Dynamin family protein 93 7e-19
Os04g0129900 Dynamin family protein 91 3e-18
Os05g0556100 Similar to SDL5A 90 8e-18
Os01g0920400 Similar to Dynamin-related protein 3A (Dynamin... 81 3e-15
AK111167 78 2e-14
Os01g0681100 Similar to Dynamin-related protein 1B (Dynamin... 76 9e-14
Os04g0381000 Dynamin family protein 76 1e-13
>Os01g0748000 Dynamin family protein
Length = 855
Score = 1614 bits (4180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 787/855 (92%), Positives = 787/855 (92%)
Query: 1 MAANAFSSPATGRTPNPKVAPSPSTRRXXXXXXXXXXXXXXXXXXKARFEAYNRLQAAAV 60
MAANAFSSPATGRTPNPKVAPSPSTRR KARFEAYNRLQAAAV
Sbjct: 1 MAANAFSSPATGRTPNPKVAPSPSTRRAADSAAAAAAAAAAASDSKARFEAYNRLQAAAV 60
Query: 61 AFGEKLPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLVLQMVHDPTALDPR 120
AFGEKLPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLVLQMVHDPTALDPR
Sbjct: 61 AFGEKLPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLVLQMVHDPTALDPR 120
Query: 121 CRFQEEDSEEYGSPMVLATAIADLIKQRTEAHLRKIQAAVSPKPIVMRAEYAYCPNLTII 180
CRFQEEDSEEYGSPMVLATAIADLIKQRTEAHLRKIQAAVSPKPIVMRAEYAYCPNLTII
Sbjct: 121 CRFQEEDSEEYGSPMVLATAIADLIKQRTEAHLRKIQAAVSPKPIVMRAEYAYCPNLTII 180
Query: 181 DTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRLLLFLQQSSVEWCSSLWLDAIRDIDP 240
DTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRLLLFLQQSSVEWCSSLWLDAIRDIDP
Sbjct: 181 DTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRLLLFLQQSSVEWCSSLWLDAIRDIDP 240
Query: 241 TFRRTMIVISKFDNRLKEFTESWEVDSYLSASGYLGDNIHPFFVALPKDRGTISNEEFRR 300
TFRRTMIVISKFDNRLKEFTESWEVDSYLSASGYLGDNIHPFFVALPKDRGTISNEEFRR
Sbjct: 241 TFRRTMIVISKFDNRLKEFTESWEVDSYLSASGYLGDNIHPFFVALPKDRGTISNEEFRR 300
Query: 301 QICQVDIDVLRHLRDNVKGGFNEEKYGPYIGFSCLKKYLESELQKRYKEAAPATLALLEQ 360
QICQVDIDVLRHLRDNVKGGFNEEKYGPYIGFSCLKKYLESELQKRYKEAAPATLALLEQ
Sbjct: 301 QICQVDIDVLRHLRDNVKGGFNEEKYGPYIGFSCLKKYLESELQKRYKEAAPATLALLEQ 360
Query: 361 RCSEVSMDLSRLDSKLQATSDVSQLRRSAMLHAANICTHLRSLLDGAADPAPELWGKTTE 420
RCSEVSMDLSRLDSKLQATSDVSQLRRSAMLHAANICTHLRSLLDGAADPAPELWGKTTE
Sbjct: 361 RCSEVSMDLSRLDSKLQATSDVSQLRRSAMLHAANICTHLRSLLDGAADPAPELWGKTTE 420
Query: 421 EEQMHSGIGSWPGINMPVKPPNSSLKLYGGAAFERVMHEFRCATYSMECPQVSREKVANI 480
EEQMHSGIGSWPGINMPVKPPNSSLKLYGGAAFERVMHEFRCATYSMECPQVSREKVANI
Sbjct: 421 EEQMHSGIGSWPGINMPVKPPNSSLKLYGGAAFERVMHEFRCATYSMECPQVSREKVANI 480
Query: 481 LLAHAGRGGSSGLTXXXXXXXXXXXXSWLAPLIDTACDRLAFVLQSLFDLAMERCRYQDS 540
LLAHAGRGGSSGLT SWLAPLIDTACDRLAFVLQSLFDLAMERCRYQDS
Sbjct: 481 LLAHAGRGGSSGLTEAAAEIARAAARSWLAPLIDTACDRLAFVLQSLFDLAMERCRYQDS 540
Query: 541 KYHQNVEDMDGYVGFLAALRCSYYKFVKELSKQCKQIVRHHLDSVTSPYSHICYENDFLS 600
KYHQNVEDMDGYVGFLAALRCSYYKFVKELSKQCKQIVRHHLDSVTSPYSHICYENDFLS
Sbjct: 541 KYHQNVEDMDGYVGFLAALRCSYYKFVKELSKQCKQIVRHHLDSVTSPYSHICYENDFLS 600
Query: 601 GVGSVANSMHRFNHFPGVTSFDLSDSGSALEEAQENVPPKDRQHMTPPAKGNESKEVLRE 660
GVGSVANSMHRFNHFPGVTSFDLSDSGSALEEAQENVPPKDRQHMTPPAKGNESKEVLRE
Sbjct: 601 GVGSVANSMHRFNHFPGVTSFDLSDSGSALEEAQENVPPKDRQHMTPPAKGNESKEVLRE 660
Query: 661 SQLTVPETPSPDLPVXXXXXXXXXXXXXXXXXARKRHARMAAYANRNHHNNVXXXXXXXX 720
SQLTVPETPSPDLPV ARKRHARMAAYANRNHHNNV
Sbjct: 661 SQLTVPETPSPDLPVDMNGGKKKDNGNLNDGGARKRHARMAAYANRNHHNNVIGGDDLGS 720
Query: 721 XXXXXXXXXXXXXAQYFAKMREVLIERNVPSALNSGFLTPCRERLFLALGFELFAVNDDR 780
AQYFAKMREVLIERNVPSALNSGFLTPCRERLFLALGFELFAVNDDR
Sbjct: 721 KSGSSYSSICSISAQYFAKMREVLIERNVPSALNSGFLTPCRERLFLALGFELFAVNDDR 780
Query: 781 FMDMFVAPGAVDAIQNERQSLLKLARFGSNWCKGLVLFGKKDLPTWLTCRGKSVWQGLWT 840
FMDMFVAPGAVDAIQNERQSLLKLARFGSNWCKGLVLFGKKDLPTWLTCRGKSVWQGLWT
Sbjct: 781 FMDMFVAPGAVDAIQNERQSLLKLARFGSNWCKGLVLFGKKDLPTWLTCRGKSVWQGLWT 840
Query: 841 TVSQTRSAYHVRALH 855
TVSQTRSAYHVRALH
Sbjct: 841 TVSQTRSAYHVRALH 855
>AK103720
Length = 898
Score = 1019 bits (2634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/522 (94%), Positives = 493/522 (94%)
Query: 191 KGEPESTPEEILSMVKSLASPPHRLLLFLQQSSVEWCSSLWLDAIRDIDPTFRRTMIVIS 250
+GEPESTPEEILSMVKSLASPPHRLLLFLQQSSVEWCSSLWLDAIRDIDPTFRRTMIVIS
Sbjct: 370 EGEPESTPEEILSMVKSLASPPHRLLLFLQQSSVEWCSSLWLDAIRDIDPTFRRTMIVIS 429
Query: 251 KFDNRLKEFTESWEVDSYLSASGYLGDNIHPFFVALPKDRGTISNEEFRRQICQVDIDVL 310
KFDNRLKEFTESWEVDSYLSASGYLGDNIHPFFVALPKDRGTISNEEFRRQICQVDIDVL
Sbjct: 430 KFDNRLKEFTESWEVDSYLSASGYLGDNIHPFFVALPKDRGTISNEEFRRQICQVDIDVL 489
Query: 311 RHLRDNVKGGFNEEKYGPYIGFSCLKKYLESELQKRYKEAAPATLALLEQRCSEVSMDLS 370
RHLRDNVKGGFNEEKYGPYIGFSCLKKYLESELQKRYKEAAPATLALLEQRCSEVSMDLS
Sbjct: 490 RHLRDNVKGGFNEEKYGPYIGFSCLKKYLESELQKRYKEAAPATLALLEQRCSEVSMDLS 549
Query: 371 RLDSKLQATSDVSQLRRSAMLHAANICTHLRSLLDGAADPAPELWGKTTEEEQMHSGIGS 430
RLDSKLQATSDVSQLRRSAMLHAANICTHLRSLLDGAADPAPELWGKTTEEEQMHSGIGS
Sbjct: 550 RLDSKLQATSDVSQLRRSAMLHAANICTHLRSLLDGAADPAPELWGKTTEEEQMHSGIGS 609
Query: 431 WPGINMPVKPPNSSLKLYGGAAFERVMHEFRCATYSMECPQVSREKVANILLAHAGRGGS 490
WPGINMPVKPPNSSLKLYGGAAFERVMHEFRCATYSMECPQVSREKVANILLAHAGRGGS
Sbjct: 610 WPGINMPVKPPNSSLKLYGGAAFERVMHEFRCATYSMECPQVSREKVANILLAHAGRGGS 669
Query: 491 SGLTXXXXXXXXXXXXSWLAPLIDTACDRLAFVLQSLFDLAMERCRYQDSKYHQNVEDMD 550
SGLT SWLAPLIDTACDRLAFVLQSLFDLAMERCRYQDSKYHQNVEDMD
Sbjct: 670 SGLTEAAAEIARAAARSWLAPLIDTACDRLAFVLQSLFDLAMERCRYQDSKYHQNVEDMD 729
Query: 551 GYVGFLAALRCSYYKFVKELSKQCKQIVRHHLDSVTSPYSHICYENDFLSGVGSVANSMH 610
GYVGFLAALRCSYYKFVKELSKQCKQIVRHHLDSVTSPYSHICYENDFLSGVGSVANSMH
Sbjct: 730 GYVGFLAALRCSYYKFVKELSKQCKQIVRHHLDSVTSPYSHICYENDFLSGVGSVANSMH 789
Query: 611 RFNHFPGVTSFDLSDSGSALEEAQENVPPKDRQHMTPPAKGNESKEVLRESQLTVPETPS 670
RFNHFPGVTSFDLSDSGSALEEAQENVPPKDRQHMTPPAKGNESKEVLRESQLTVPETPS
Sbjct: 790 RFNHFPGVTSFDLSDSGSALEEAQENVPPKDRQHMTPPAKGNESKEVLRESQLTVPETPS 849
Query: 671 PDLPVXXXXXXXXXXXXXXXXXARKRHARMAAYANRNHHNNV 712
PDLPV ARKRHARMAAYANRNHHNNV
Sbjct: 850 PDLPVDMNGGKKKDNENLNDGGARKRHARMAAYANRNHHNNV 891
>Os12g0178700 Similar to Dynamin-like protein
Length = 575
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 239/460 (51%), Gaps = 37/460 (8%)
Query: 49 FEAYNRLQAAAVAFGEKLPIPEIVAIGG-QSDGKSSLLEALLGFRFNVREVEMGTRRPLV 107
+EAYN LQ A G V + G Q+DGKS+L+EAL+GF+FN TRRP+
Sbjct: 27 YEAYNELQGLAAELGGAAAPAPAVVVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPVA 86
Query: 108 LQMVHDPTALDPRCRF-----QEEDSEEYGSPMVLATAIADLIKQRTEAHLRKIQ---AA 159
L + +P PRCR +D +E A +AD I+ EA +++ +
Sbjct: 87 LHLRFNPRCHAPRCRLLAGSGAGDDEDEEAGVAGRAMPLAD-IQAYIEAENMRLENDPSQ 145
Query: 160 VSPKPIVMRAEYAYCPNLTIIDTPGFVLKA---KKGEPESTPEEILSMVKSLASPPHRLL 216
S K I++R EY +CPNLTIIDTPG +L A K +S + ++V++ ++
Sbjct: 146 FSEKEIIIRIEYKHCPNLTIIDTPGLILPAPGRKNRVLQSQACAVETLVRAKIKHKETII 205
Query: 217 LFLQQSSVEWCSSLWLDAIRDIDPTFRRTMIVISKFDNRLKEFTESWEVDSYLSA----- 271
L L+ S +W ++ + +DP RT++V +K D ++ +F + +V+ +L
Sbjct: 206 LCLEDCS-DWSNATTRRVVMQVDPDLARTVLVSTKLDTKILQFARASDVEVFLHPPTCAL 264
Query: 272 -SGYLGDNIHPFFVALPKDR-GTI------SNEEFRRQICQVDIDVLRHLRDNVKGGFNE 323
LGD +PFF ++P R G+ SNEEF++ I +++ + L D + G +
Sbjct: 265 DGSLLGD--YPFFTSVPSGRVGSCHEAVFRSNEEFKKAISLRELEDVASLEDKLGRGLTK 322
Query: 324 EKYGPYIGFSCLKKYLESELQKRYKEAAPATLALLEQRCSEVSMDLSRLDSKLQATSDVS 383
E+ IG S L+ +LE L+KRY E+ P + LLE+ + L ++ ++ + D +
Sbjct: 323 EEKN-RIGVSNLRLFLEELLRKRYIESVPLIIPLLEKEHRGATRKLREVNQEI-SDLDEA 380
Query: 384 QLRRSAMLHAANICTHLRSLLDGAADPAPELWGKTTEEEQMHSGIGSWPGINMPVKP--- 440
+++ A L + + L LL G P+ +G+T E+++ G ++ G + P
Sbjct: 381 KMKEKARLFHDSFLSKLSLLLKGMVVAPPDRFGETLINERINGG--TFTGSENFLIPNKL 438
Query: 441 -PNSSLKLYGGAAFERVMHEFRCATYSMECPQVSREKVAN 479
PN+ ++LYGGA + R M EFR S+ CP ++RE++ N
Sbjct: 439 MPNAGMRLYGGAQYHRAMAEFRLVVGSIRCPPITREEIVN 478
>Os10g0567800 Similar to Dynamin-related protein 1E (Dynamin-like protein E)
(Dynamin-like protein 4) (Dynamin-like protein DLP2)
Length = 618
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 18/214 (8%)
Query: 53 NRLQAAAVAFGE--------KLP-----IPEIVAIGGQSDGKSSLLEALLGFRFNVREVE 99
NR+Q A G+ LP +P + +GGQS GKSS+LE+++G F R
Sbjct: 12 NRIQRACTVLGDHGGGDGTASLPTLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSG 71
Query: 100 MGTRRPLVLQMVHDPTALDPRCRFQEEDSEEYGSPMVLATAIADLIKQRTEAHLRKIQAA 159
+ TRRPLVLQ+ + F + ++ I D + T
Sbjct: 72 IVTRRPLVLQLHKTEDGVQEYAEFLHMPKRRFNDFALVRKEIQDETDRLTGK-----TKQ 126
Query: 160 VSPKPIVMRAEYAYCPNLTIIDTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRLLLFL 219
+SP PI + + NLT+ID PG A +G+PES ++I +MV+S P+ ++L +
Sbjct: 127 ISPVPIHLSIYSPHVVNLTLIDLPGLTKVAVEGQPESIVQDIENMVRSYVDKPNCIILAI 186
Query: 220 QQSSVEWCSSLWLDAIRDIDPTFRRTMIVISKFD 253
++ + +S + RD+DPT RT V++K D
Sbjct: 187 SPANQDIATSDAIKLARDVDPTGERTFGVLTKLD 220
>AK110298
Length = 625
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 53 NRLQAAAVAFGEKL-------PIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGTRRP 105
NRLQ G+ + IV +GGQS GKSS+LEA++G F R + TRRP
Sbjct: 9 NRLQQICTQLGDTAGNSVLVDKLSSIVVVGGQSSGKSSVLEAVVGRDFLPRGTGIVTRRP 68
Query: 106 LVLQMVHDPTALDPRCRFQEEDSEEYGSPMVLATAIADLIKQRTEAHLRKI--QAAVSPK 163
LVL +VH DP+ + E G I I+ TE LR Q VSP
Sbjct: 69 LVLNLVH---VDDPKAQEYGEFMHRQGQKFFDFDKIRQEIEDETERLLRSQPGQKTVSPV 125
Query: 164 PIVMRAEYAYCPNLTIIDTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRLLLFLQQSS 223
PI + PNLT++D PG G+P S +++ M + + ++L + ++
Sbjct: 126 PIYLTVYSPLVPNLTLVDMPGLTKVPIDGQPLSIVQDLEEMCRQYIKGDNAIILAVTPAN 185
Query: 224 VEWCSSLWLDAIRDIDPTFRRTMIVISKFD 253
+ +S L R++DPT RT+ V++K D
Sbjct: 186 ADLATSDALRIAREVDPTGDRTIGVLTKVD 215
>Os09g0572900 Similar to Dynamin-related protein 1E (Dynamin-like protein E)
(Dynamin-like protein 4) (Dynamin-like protein DLP2)
Length = 626
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 53 NRLQAAAVAFGE-------KLP-----IPEIVAIGGQSDGKSSLLEALLGFRFNVREVEM 100
NR+Q A A G+ LP +P I +GGQS GKSS+LE+++G F R +
Sbjct: 12 NRIQRACTALGDHGGGEGANLPTLWESLPTIAVVGGQSSGKSSVLESIVGRDFLPRGSGI 71
Query: 101 GTRRPLVLQMVHDPTALDPRCRFQEEDSEEYGSPMVLATAIADLIKQRTEAHLRKIQAAV 160
TRRPLVLQ+ F + ++ IAD + T +
Sbjct: 72 VTRRPLVLQLHQIDKGAHDYAEFLHLPKTRFSDFALVRQEIADETDRVTGK-----TKQI 126
Query: 161 SPKPIVMRAEYAYCPNLTIIDTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRLLLFLQ 220
SP PI + NLT+ID PG A +G+PES +I +MV+S P+ ++L +
Sbjct: 127 SPVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPESVVHDIENMVRSYVEKPNCIILAIS 186
Query: 221 QSSVEWCSSLWLDAIRDIDPTFRRTMIVISKFD 253
++ + +S + +++DP+ RT V++K D
Sbjct: 187 PANQDIATSDAIKLSKEVDPSGERTFGVLTKLD 219
>Os03g0260000 Dynamin family protein
Length = 678
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 117/232 (50%), Gaps = 16/232 (6%)
Query: 49 FEAYNRLQAAAVAFGEKLPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLVL 108
+A +RL+ V E + +P IV +G QS GKSS+LE+L G R + TR PLV+
Sbjct: 48 LDAVDRLRHLKVT-QEGIQLPTIVVVGDQSSGKSSVLESLAGISLP-RGQGICTRVPLVM 105
Query: 109 QMVHDPTALDPRCRFQEEDSEEYGSPMVLATA---IADLIKQRTEAHLRKIQAAVSPKPI 165
++ DP+A P+ + EY + V+ T+ +AD I T A + +S PI
Sbjct: 106 RLQDDPSADSPKLQL------EYSNGRVVTTSEAKVADAINAAT-AEIAGSGKGISDAPI 158
Query: 166 VMRAEYAYCPNLTIIDTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRLLLFLQQSSVE 225
+ P+LT++D PG +G+P+ ++I ++K +P ++L + ++V+
Sbjct: 159 TLVVRKRGVPDLTLVDLPGITRVPVQGQPDDIYDQIAKIIKEYIAPKESIILNVLSATVD 218
Query: 226 W--CSSLWLDAIRDIDPTFRRTMIVISKFDNRLKEFTESWEVDSYLSASGYL 275
+ C S+ + + +D T RT+ V++K D + E +D GY+
Sbjct: 219 FPTCESIRMS--QQVDRTGERTLAVVTKADKAPEGLLEKVTMDDVNIGLGYV 268
>Os04g0129900 Dynamin family protein
Length = 564
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 16/232 (6%)
Query: 49 FEAYNRLQAAAVAFGEKLPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLVL 108
+A +RL+ V+ E + +P IV +G QS GKSS+LE+L G R + TR PLV+
Sbjct: 44 LDAVDRLRQLNVS-QEGIQLPTIVVVGDQSSGKSSVLESLAGISLP-RGQGICTRVPLVM 101
Query: 109 QMVHDPTALDPRCRFQEEDSEEYGSPMVLATA---IADLIKQRTEAHLRKIQAAVSPKPI 165
++ +P R EY V+AT+ +AD I T A + +S PI
Sbjct: 102 RLQDAGDDDEPALRL------EYSGGRVVATSEAEVADAINAAT-AEIAGCGKGISNAPI 154
Query: 166 VMRAEYAYCPNLTIIDTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRLLLFLQQSSVE 225
+ P+LT++D PG KG+PE ++I ++K+ +P ++L + ++V+
Sbjct: 155 TLVVRKKGVPDLTLVDLPGITRVPVKGQPEDIYDQIAGIIKAYIAPRESIILNVLSATVD 214
Query: 226 W--CSSLWLDAIRDIDPTFRRTMIVISKFDNRLKEFTESWEVDSYLSASGYL 275
+ C S+ + + +D T RT+ V++K D + E VD GY+
Sbjct: 215 FPTCESIRMS--QQVDRTGNRTLAVVTKSDKAPEGLLEKVTVDDVRIGLGYV 264
>Os05g0556100 Similar to SDL5A
Length = 609
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 53 NRLQAAAVAFGEK-----LP-----IPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGT 102
N+LQ A A G+ LP +P I +GGQS GKSS+LE+++G F R + T
Sbjct: 9 NKLQRACTALGDHGEESALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVT 68
Query: 103 RRPLVLQMVHDPTALDPRCRFQEEDSEEYGSPMVLATAIADLIKQRTEAHLRKIQAAVSP 162
RRPLVLQ+ H F + + ++ IAD + T +S
Sbjct: 69 RRPLVLQL-HRIDGDREYAEFMHLPRKRFTDFALVRKEIADETDRETGR-----SKQISS 122
Query: 163 KPIVMRAEYAYCPNLTIIDTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRLLLFLQQS 222
PI + NLT+ID PG A +G+P+S ++I +MV+S P+ ++L + +
Sbjct: 123 VPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSFIEKPNCIILAVSPA 182
Query: 223 SVEWCSSLWLDAIRDIDPTFRRTMIVISKFD 253
+ + +S + R++DP RT V++K D
Sbjct: 183 NQDLATSDAIKISREVDPKGERTFGVLTKID 213
>Os01g0920400 Similar to Dynamin-related protein 3A (Dynamin-like protein 2)
(Dynamin-like protein 2a). Splice isoform 2
Length = 818
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 53 NRLQAAAVAFGEK--LPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLVLQM 110
N+LQ G + +P++ +G QS GKSS+LEAL+G F R ++ TRRPLVLQ+
Sbjct: 33 NKLQDIFSQLGSSSTIDLPQVAVVGSQSSGKSSVLEALVGRDFLPRGSDICTRRPLVLQL 92
Query: 111 VHDPTALDPRCRFQEEDSEEYGSPMVL-ATAIADLIKQRTEAHLRKIQAA-----VSPKP 164
VH P R + +++E+G + L D + R E + A VS K
Sbjct: 93 VHQPR------RPADAEADEWGEFLHLPGRRFYDFREIRREIQAETDREAGGNKGVSDKQ 146
Query: 165 IVMRAEYAYCPNLTIIDTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRLLLFLQQSSV 224
I ++ N+T++D PG +P I +M+ S ++L + ++
Sbjct: 147 IRLKIYSPNVLNITLVDLPGITKVPVGDQPTDIEARIRTMILSYIKHKTCIILAVSPANA 206
Query: 225 EWCSSLWLDAIRDIDPTFRRTMIVISKFD 253
+ +S L R+ DP RT+ VI+K D
Sbjct: 207 DLSNSDALQIARNADPDGSRTIGVITKLD 235
>AK111167
Length = 795
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 64 EKLPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLVLQMV---------HDP 114
+ L +P+IV +G QS GKSS+LE ++G F R + TRRPL+LQ++ +D
Sbjct: 26 DSLDLPQIVVVGSQSAGKSSVLENIVGRDFLPRGSGIVTRRPLILQLINVEEDESESNDT 85
Query: 115 TAL---DPRCRFQEEDSEEYGSPMVLATAIADLIKQRTEAHLRKIQA---AVSPKPIVMR 168
+ +P + E +E + P T D +K+ E ++ ++ +PI ++
Sbjct: 86 VHVSYQNPTQARRSEWAEFHHIPGRRFTDFGD-VKREIENETSRVAGNNKGINRQPINLK 144
Query: 169 AEYAYCPNLTIIDTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRLLLFLQQSSVEWCS 228
+ NLT++D PG +P ++ +++ + P+ ++L + ++V+ +
Sbjct: 145 IYSPHVLNLTLVDLPGLTKVPIGDQPPDIEKQTRTLISEFIAKPNSIILAVSPANVDIVN 204
Query: 229 SLWLDAIRDIDPTFRRTMIVISKFD 253
S L R +DP RRT+ V++K D
Sbjct: 205 SEALKLARHVDPLGRRTIGVLTKVD 229
>Os01g0681100 Similar to Dynamin-related protein 1B (Dynamin-like protein B)
Length = 184
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 86/169 (50%), Gaps = 22/169 (13%)
Query: 53 NRLQAAAVAFGEK-----LP-----IPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGT 102
N+LQ A A G+ LP +P I +GGQS GKSS+LE+++G F R + T
Sbjct: 9 NKLQRACTALGDHGEESALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVT 68
Query: 103 RRPLVLQMVHDPTALDPRCRFQEEDSEEYGSPMVLATAIADLIKQRTEAHLRKIQAAVSP 162
RRPLVLQ+ H F + +Y ++ IAD +R H ++I SP
Sbjct: 69 RRPLVLQL-HRINGDREYAEFMHNPTVKYTDFALVRKEIADE-TERATGHKKQI----SP 122
Query: 163 KPIVMRAEYAYCPN---LTIIDTPGFVLKAKKGEPESTPEEILSMVKSL 208
PI + Y PN LT+ID PG A +G+ +S ++I +MV+S
Sbjct: 123 VPIYLS---IYSPNVVDLTLIDLPGLTKVAVEGQSDSIVQDIETMVRSF 168
>Os04g0381000 Dynamin family protein
Length = 797
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Query: 66 LPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLVLQMVHDPTALDPRCRFQE 125
L +P++ AIGGQS GKSS+LEAL+G F R ++ TRRPLVLQ+V R E
Sbjct: 43 LELPQVAAIGGQSSGKSSVLEALVGRDFLPRGPDICTRRPLVLQLV--------RHSAPE 94
Query: 126 EDSEEYGSPMVLATAIADLIKQRTEAHLRKIQAA-----VSPKPIVMRAEYAYCPNLTII 180
E E +P A D + + E L + A VS K I ++ ++T++
Sbjct: 95 EWGEFLHAP---ARRFHDFDQIKREIQLETDKEAGGNKGVSEKQIRLKIFSPNVLDITLV 151
Query: 181 DTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRLLLFLQQSSVEWCSSLWLDAIRDIDP 240
D PG +P I SM+ P ++L + ++ + +S L + DP
Sbjct: 152 DLPGITRVPVGDQPSDIESRIRSMIMQYIKHPSCIILAVTPANADLANSDALQLAKLADP 211
Query: 241 TFRRTMIVISKFD 253
RT+ VI+K D
Sbjct: 212 DGSRTIGVITKLD 224
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.133 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 28,074,662
Number of extensions: 1152099
Number of successful extensions: 2715
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 2695
Number of HSP's successfully gapped: 13
Length of query: 855
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 746
Effective length of database: 11,344,475
Effective search space: 8462978350
Effective search space used: 8462978350
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 160 (66.2 bits)