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Os04g0381000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Dynamin family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.16 (0.0171) R2 : 0.47
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.892 (0.0448) R2dC : 0.463 R2C : 0.462
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0818 (0.036) R2dN8 : 0.00776 R2N8 : 0.00708
σ : 0.322
deviance : 47.51
__
_____
C
peak time of C : 17.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.94 0.301 9.14 0.165 1.08 0.466 0.0552 0.478 -0.0636 15.6 0.03634 30 -- --
41.59 0.303 9.13 0.162 1.02 0.455 -0.359 -- -0.031 15.5 0.03634 30 -- --
40.95 0.298 9.14 0.165 1.08 0.465 -- 0.455 -0.0638 15.6 0.03996 29 -- --
41.99 0.304 9.13 0.154 1.01 0.446 -- -- -0.0338 15.5 0.03634 30 -- --
86.3 0.435 9.14 0.0829 -- 0.117 -- 0.337 -0.0865 -- 0.03996 29 -- --
47.09 0.322 9.15 0.117 0.894 -- -0.15 -- -0.068 17.6 -- -- -- --
47.15 0.322 9.15 0.117 0.893 -- -- -- -0.0687 17.6 -- -- -- --
56.23 0.349 9.13 0.219 -- -0.669 -- -- 0.0997 -- 5.561e-08 632 -- --
42.61 0.306 9.14 -- 0.999 0.433 -- -- -0.0519 15.6 0.03634 30 -- --
88.62 0.44 9.14 0.0885 -- -- -- -- -0.0903 -- -- -- -- --
47.51 0.322 9.16 -- 0.892 -- -- -- -0.0818 17.6 -- -- -- --
53.85 0.342 9.16 -- -- -0.893 -- -- 0.103 -- 7.272e-07 660 -- --
88.82 0.44 9.14 -- -- -- -- -- -0.1 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 34.08 wind 7.0 90 < th dose independent rect. 8 20
2 34.14 wind 5.0 270 < th dose independent rect. 3 3
3 34.37 precipitation 0.1 270 < th dose independent rect. 3 3
4 34.37 precipitation 0.1 270 < th dose dependent rect. 3 3
5 34.42 wind 5.0 270 < th dose independent rect. 4 1
8 34.46 wind 9.0 270 < th dose independent rect. 6 21
10 34.60 wind 9.0 270 < th dose independent rect. 5 23
14 34.72 precipitation 0.1 270 < th dose independent rect. 4 1
15 34.72 precipitation 0.1 270 < th dose dependent rect. 4 1
18 34.77 radiation 1.0 270 < th dose dependent rect. 4 1
20 34.78 temperature 10.0 90 > th dose independent rect. 4 4
22 34.78 temperature 30.0 90 < th dose independent rect. 4 4
23 34.78 humidity 50.0 90 > th dose independent rect. 4 4
25 34.78 atmosphere 995.0 90 > th dose independent rect. 4 4
26 34.78 atmosphere 1015.0 90 < th dose independent rect. 4 4
27 34.78 temperature 10.0 90 > th dose independent rect. 8 20
37 34.82 radiation 20.0 270 < th dose independent rect. 3 3
41 34.82 temperature 10.0 270 > th dose independent rect. 6 21
42 34.84 atmosphere 995.0 90 > th dose independent rect. 8 20
43 34.84 radiation 40.0 270 < th dose dependent rect. 3 3
48 34.89 wind 5.0 270 < th dose independent rect. 2 5
51 34.95 temperature 10.0 270 > th dose independent rect. 4 1
53 34.95 temperature 30.0 270 < th dose independent rect. 4 1
54 34.95 humidity 50.0 270 > th dose independent rect. 4 1
57 34.95 atmosphere 995.0 270 > th dose independent rect. 4 1
58 34.95 atmosphere 1010.0 270 < th dose independent rect. 4 1
60 34.95 radiation 20.0 270 < th dose independent rect. 4 1
64 34.95 temperature 10.0 270 > th dose independent rect. 5 23
66 34.96 radiation 30.0 270 < th dose dependent rect. 4 1
72 35.02 radiation 1.0 270 < th dose independent rect. 4 1
74 35.10 wind 9.0 90 < th dose dependent rect. 8 20
78 35.20 precipitation 0.1 270 < th dose independent rect. 2 5
79 35.20 precipitation 0.1 270 < th dose dependent rect. 2 5
81 35.24 precipitation 0.1 90 < th dose independent rect. 8 20
82 35.24 precipitation 0.1 90 < th dose dependent rect. 8 20
83 35.25 wind 9.0 90 < th dose dependent rect. 4 4
85 35.27 radiation 10.0 270 < th dose independent rect. 2 5
89 35.33 atmosphere 1000.0 90 > th dose dependent rect. 4 4
94 35.37 wind 1.0 270 > th dose independent rect. 3 3
98 35.44 radiation 30.0 270 < th dose dependent rect. 2 5
101 35.46 wind 9.0 270 < th dose dependent rect. 4 1
104 35.49 temperature 10.0 90 > th dose dependent rect. 4 4
107 35.51 temperature 15.0 90 > th dose independent rect. 8 7
111 35.54 humidity 70.0 270 > th dose independent rect. 2 5
116 35.56 temperature 10.0 270 > th dose independent rect. 2 5
118 35.56 temperature 30.0 270 < th dose independent rect. 2 5
119 35.56 humidity 50.0 270 > th dose independent rect. 2 5
121 35.56 atmosphere 995.0 270 > th dose independent rect. 2 5
122 35.56 atmosphere 1015.0 270 < th dose independent rect. 2 5
131 35.59 wind 9.0 1440 < th dose independent rect. 5 4
132 35.59 temperature 10.0 1440 > th dose independent rect. 5 4
135 35.59 humidity 50.0 1440 > th dose independent rect. 5 4
137 35.59 atmosphere 995.0 1440 > th dose independent rect. 5 4
138 35.59 atmosphere 1015.0 1440 < th dose independent rect. 5 4
139 35.59 temperature 10.0 1440 > th dose independent rect. 9 20
143 35.60 precipitation 0.1 270 < th dose independent rect. 6 21
144 35.60 precipitation 0.1 270 < th dose dependent rect. 6 21
185 35.79 atmosphere 1000.0 270 > th dose dependent rect. 4 1
189 35.82 wind 9.0 90 < th dose independent rect. 8 7
190 35.82 atmosphere 995.0 90 > th dose independent rect. 8 7
192 35.85 precipitation 0.1 90 < th dose independent rect. 8 7
196 35.85 precipitation 0.1 90 < th dose dependent rect. 8 7
200 35.92 humidity 50.0 270 > th dose dependent rect. 4 1
202 35.93 atmosphere 1015.0 90 < th dose independent rect. 8 7
203 35.93 temperature 10.0 90 > th dose independent rect. 15 17
207 35.95 wind 7.0 270 < th dose independent rect. 17 10
215 35.99 wind 1.0 270 > th dose independent rect. 2 5
217 35.99 radiation 40.0 90 < th dose independent rect. 15 17
229 36.04 precipitation 0.1 90 < th dose independent rect. 15 17
232 36.04 wind 9.0 270 < th dose dependent rect. 2 5
233 36.04 precipitation 0.1 90 < th dose dependent rect. 15 17
234 36.05 precipitation 0.1 270 < th dose independent rect. 3 14
238 36.05 precipitation 0.1 270 < th dose dependent rect. 3 14
241 36.07 temperature 10.0 270 > th dose dependent rect. 4 1
242 36.07 radiation 1.0 270 < th dose dependent rect. 3 8
276 36.14 precipitation 0.1 10 < th dose independent rect. 15 17
279 36.14 precipitation 0.1 10 < th dose dependent rect. 15 17
281 36.15 radiation 1.0 270 < th dose independent rect. 3 8
282 36.15 humidity 50.0 270 > th dose dependent rect. 3 3
306 36.22 wind 9.0 10 < th dose independent rect. 8 7
307 36.22 wind 9.0 90 < th dose independent rect. 15 17
310 36.23 atmosphere 1015.0 90 < th dose independent rect. 8 20
322 36.25 wind 9.0 90 < th dose dependent rect. 8 7
344 36.30 atmosphere 995.0 270 > th dose independent rect. 6 21
355 36.32 temperature 10.0 10 > th dose independent rect. 8 7
357 36.32 atmosphere 995.0 10 > th dose independent rect. 8 7
358 36.32 atmosphere 1015.0 10 < th dose independent rect. 8 7
359 36.32 precipitation 0.1 10 < th dose independent rect. 8 7
360 36.32 radiation 10.0 270 < th dose independent rect. 17 10
361 36.32 temperature 10.0 10 > th dose independent rect. 15 17
364 36.32 precipitation 0.1 10 < th dose dependent rect. 8 7
379 36.36 radiation 1.0 90 > th dose independent rect. 8 7
383 36.37 radiation 1.0 30 > th dose independent rect. 5 3
403 36.38 wind 9.0 270 < th dose dependent rect. 7 4
405 36.39 temperature 10.0 270 > th dose independent rect. 17 10
409 36.39 temperature 10.0 270 > th dose independent rect. 3 14
410 36.39 atmosphere 1015.0 270 < th dose independent rect. 3 14
412 36.40 humidity 90.0 90 < th dose independent rect. 8 7
413 36.40 radiation 1.0 10 > th dose independent rect. 8 7
428 36.41 temperature 10.0 1440 > th dose independent rect. 9 7
431 36.41 temperature 10.0 1440 > th dose independent rect. 16 17
446 36.43 wind 9.0 270 < th dose dependent rect. 8 2
488 36.52 temperature 30.0 270 < th dose dependent rect. 4 1
490 36.53 humidity 50.0 90 > th dose independent rect. 8 20
498 36.55 radiation 40.0 270 < th dose dependent rect. 17 10
526 36.64 humidity 50.0 90 > th dose independent rect. 8 7
531 36.65 wind 1.0 90 > th dose independent rect. 8 7
555 36.68 precipitation 0.1 270 < th dose independent rect. 17 10
559 36.68 precipitation 0.1 270 < th dose dependent rect. 17 10
605 36.76 atmosphere 995.0 270 > th dose independent rect. 17 10
610 36.77 atmosphere 995.0 90 > th dose independent rect. 15 17
613 36.78 humidity 90.0 10 < th dose independent rect. 8 7
618 36.80 humidity 50.0 270 > th dose independent rect. 17 10
641 36.87 radiation 1.0 30 > th dose independent rect. 15 17
679 36.94 wind 9.0 270 < th dose independent rect. 3 14
680 36.94 wind 1.0 270 > th dose independent rect. 11 20
688 36.95 wind 1.0 270 > th dose independent rect. 13 17
696 36.98 humidity 50.0 270 > th dose dependent rect. 2 5
697 36.99 radiation 1.0 270 > th dose independent rect. 8 2
706 37.00 temperature 10.0 270 > th dose dependent rect. 2 5
738 37.08 wind 5.0 270 < th dose independent rect. 8 2
740 37.08 radiation 1.0 270 > th dose independent rect. 7 4
779 37.14 radiation 10.0 30 < th dose dependent sin 12 NA
793 37.15 temperature 10.0 10 > th dose dependent rect. 8 7
796 37.16 temperature 10.0 30 > th dose dependent rect. 8 20
835 37.23 temperature 15.0 270 > th dose independent rect. 8 2
850 37.26 atmosphere 995.0 10 > th dose independent rect. 15 17
852 37.26 temperature 10.0 270 > th dose dependent rect. 8 2
853 37.26 wind 9.0 270 < th dose dependent rect. 17 9
857 37.28 humidity 90.0 10 < th dose independent rect. 4 4
873 37.31 humidity 90.0 10 < th dose independent rect. 2 6
905 37.36 atmosphere 1015.0 90 < th dose independent rect. 15 17
908 37.37 atmosphere 1005.0 90 > th dose independent rect. 4 4
967 37.46 radiation 1.0 90 > th dose independent rect. 13 19
997 37.49 temperature 10.0 270 > th dose dependent rect. 7 4