Os01g0920400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dynamin-related protein 3A (Dynamin-like protein 2) (Dynamin-like protein 2a). Splice isoform 2.
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Os01g0920400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dynamin-related protein 3A (Dynamin-like protein 2) (Dynamin-like protein 2a). Splice isoform 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10.08 | 0.149 | 11.5 | -0.256 | 0.511 | -0.402 | -0.118 | 0.191 | 0.0558 | 5.97 | 24 | 4912 | -- | -- |
| 10.11 | 0.148 | 11.5 | -0.195 | 0.51 | -0.388 | -0.107 | -- | 0.0673 | 5.97 | 23.95 | 4913 | -- | -- |
| 10.11 | 0.148 | 11.5 | -0.257 | 0.51 | -0.403 | -- | 0.189 | 0.0557 | 5.97 | 24.03 | 4931 | -- | -- |
| 10.14 | 0.148 | 11.5 | -0.196 | 0.509 | -0.388 | -- | -- | 0.0694 | 5.97 | 24 | 4928 | -- | -- |
| 23.08 | 0.224 | 11.6 | -0.235 | -- | -0.41 | -- | 0.105 | 0.0507 | -- | 24.1 | 5655 | -- | -- |
| 15.07 | 0.182 | 11.5 | -0.00938 | 0.514 | -- | -0.109 | -- | 0.188 | 5.8 | -- | -- | -- | -- |
| 15.1 | 0.182 | 11.5 | -0.0101 | 0.514 | -- | -- | -- | 0.189 | 5.8 | -- | -- | -- | -- |
| 23.09 | 0.224 | 11.5 | -0.193 | -- | -0.401 | -- | -- | 0.0657 | -- | 24 | 5660 | -- | -- |
| 11 | 0.154 | 11.5 | -- | 0.502 | -0.329 | -- | -- | 0.108 | 5.91 | 24 | 4886 | -- | -- |
| 28.79 | 0.251 | 11.5 | 0.00573 | -- | -- | -- | -- | 0.201 | -- | -- | -- | -- | -- |
| 15.1 | 0.182 | 11.5 | -- | 0.514 | -- | -- | -- | 0.19 | 5.8 | -- | -- | -- | -- |
| 23.71 | 0.227 | 11.5 | -- | -- | -0.399 | -- | -- | 0.108 | -- | 25.4 | 2783 | -- | -- |
| 28.79 | 0.25 | 11.5 | -- | -- | -- | -- | -- | 0.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 9.30 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 6 | 9.81 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 14 | 9.98 | temperature | 10 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 19 | 10.00 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 48 | 10.11 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 90 | 10.17 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 130 | 10.20 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 13 |
| 137 | 10.21 | temperature | 20 | 4320 | > th | dose dependent | sin | 17 | NA |
| 139 | 10.21 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 158 | 10.22 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 243 | 10.24 | temperature | 20 | 4320 | > th | dose dependent | rect. | 14 | 18 |
| 435 | 10.28 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 652 | 10.32 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 5 |
| 789 | 10.36 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 827 | 10.38 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 5 |
| 868 | 10.39 | temperature | 20 | 4320 | > th | dose dependent | sin | 7 | NA |
| 955 | 10.42 | temperature | 10 | 4320 | > th | dose dependent | sin | 18 | NA |