Os01g0748000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dynamin family protein.
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Os01g0748000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dynamin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.58 | 0.372 | 7.01 | 0.261 | 0.634 | -1.65 | 0.322 | 2.61 | 0.109 | 3.62 | 17.61 | 2468 | -- | -- |
| 69.84 | 0.389 | 7.11 | -0.319 | 0.521 | -1.81 | 0.649 | -- | -0.0637 | 3.47 | 12.84 | 3358 | -- | -- |
| 62.87 | 0.369 | 7.01 | 0.266 | 0.639 | -1.66 | -- | 2.66 | 0.11 | 3.67 | 17.4 | 2469 | -- | -- |
| 68.85 | 0.386 | 7.11 | -0.408 | 0.658 | -1.8 | -- | -- | -0.0815 | 3.65 | 13.93 | 2470 | -- | -- |
| 74.47 | 0.402 | 7.01 | 0.243 | -- | -1.71 | -- | 2.76 | 0.131 | -- | 18.45 | 1860 | -- | -- |
| 129.47 | 0.533 | 7.18 | -1.11 | 0.526 | -- | 0.341 | -- | -0.441 | 4.68 | -- | -- | -- | -- |
| 129.75 | 0.533 | 7.18 | -1.11 | 0.53 | -- | -- | -- | -0.443 | 4.83 | -- | -- | -- | -- |
| 86.51 | 0.433 | 7.11 | -0.339 | -- | -1.8 | -- | -- | -0.0771 | -- | 13.07 | 3327 | -- | -- |
| 72.45 | 0.396 | 7.09 | -- | 0.579 | -1.95 | -- | -- | -0.00464 | 4.38 | 14.59 | 3252 | -- | -- |
| 144.57 | 0.562 | 7.19 | -1.09 | -- | -- | -- | -- | -0.429 | -- | -- | -- | -- | -- |
| 162.05 | 0.595 | 7.16 | -- | 0.51 | -- | -- | -- | -0.32 | 4.89 | -- | -- | -- | -- |
| 87.34 | 0.435 | 7.07 | -- | -- | -1.96 | -- | -- | 0.118 | -- | 7.905 | 7717 | -- | -- |
| 175.76 | 0.619 | 7.16 | -- | -- | -- | -- | -- | -0.309 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.15 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 17 |
| 49 | 64.61 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 17 |
| 101 | 64.83 | temperature | 15 | 1440 | > th | dose dependent | sin | 12 | NA |
| 118 | 64.89 | temperature | 15 | 1440 | > th | dose dependent | sin | 7 | NA |
| 149 | 65.00 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 154 | 65.01 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 164 | 65.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 167 | 65.03 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 188 | 65.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 220 | 65.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 294 | 65.28 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 8 |
| 386 | 65.43 | temperature | 30 | 1440 | < th | dose dependent | sin | 10 | NA |
| 428 | 65.48 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 564 | 65.69 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 683 | 65.87 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 785 | 66.06 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 855 | 66.18 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 989 | 66.47 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |