Os04g0129900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dynamin family protein.
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Os04g0129900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dynamin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 236.58 | 0.723 | 9.14 | -1.86 | 0.803 | 1.26 | 1.2 | -7.4 | -1.2 | 0.273 | 25.6 | 325 | 8.51 | -- |
| 274.1 | 0.771 | 9.06 | -0.912 | 0.766 | 1.19 | 0.433 | -- | -0.912 | 24 | 25.2 | 408 | 8.65 | -- |
| 242.56 | 0.725 | 9.13 | -1.83 | 0.807 | 1.25 | -- | -6.77 | -1.19 | 0.401 | 25.57 | 325 | 8.64 | -- |
| 274.24 | 0.771 | 9.06 | -0.938 | 0.778 | 1.14 | -- | -- | -0.885 | 23 | 25.3 | 513 | 8.77 | -- |
| 271.55 | 0.767 | 9.16 | -1.92 | -- | 1.88 | -- | -6.84 | -1.34 | -- | 25.6 | 393 | 8.39 | -- |
| 303.32 | 0.816 | 9.01 | -0.762 | 1.3 | -- | 0.357 | -- | -0.6 | 23.1 | -- | -- | -- | -- |
| 303.85 | 0.816 | 9.01 | -0.775 | 1.3 | -- | -- | -- | -0.601 | 23.1 | -- | -- | -- | -- |
| 293.18 | 0.797 | 9.08 | -1.02 | -- | 1.73 | -- | -- | -1.03 | -- | 25.03 | 513 | 9.55 | -- |
| 296.77 | 0.802 | 9.04 | -- | 0.811 | 1.05 | -- | -- | -0.762 | 23.1 | 25.2 | 461 | 8.39 | -- |
| 408.55 | 0.944 | 8.98 | -0.746 | -- | -- | -- | -- | -0.59 | -- | -- | -- | -- | -- |
| 319.7 | 0.836 | 8.99 | -- | 1.29 | -- | -- | -- | -0.514 | 23 | -- | -- | -- | -- |
| 320.28 | 0.834 | 9.04 | -- | -- | 1.61 | -- | -- | -0.897 | -- | 25.03 | 511 | 9.56 | -- |
| 423.21 | 0.96 | 8.96 | -- | -- | -- | -- | -- | -0.508 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 237.96 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 13 |
| 4 | 239.50 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 10 | 241.54 | temperature | 25.0 | 270 | > th | dose independent | sin | 15 | NA |
| 18 | 243.80 | temperature | 25.0 | 270 | < th | dose independent | sin | 14 | NA |
| 29 | 247.20 | wind | 9.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 31 | 247.79 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 33 | 248.25 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 13 |
| 36 | 248.58 | wind | 9.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 42 | 249.45 | temperature | 25.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 86 | 253.90 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 3 |
| 108 | 255.49 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 110 | 255.53 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 114 | 255.64 | wind | 3.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 119 | 256.26 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 4 |
| 125 | 256.62 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 127 | 256.69 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 5 |
| 128 | 256.74 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 130 | 256.81 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 140 | 257.20 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 155 | 258.10 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 169 | 258.70 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 11 |
| 180 | 258.97 | wind | 3.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 190 | 259.45 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 212 | 260.02 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 215 | 260.09 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 217 | 260.14 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 23 |
| 218 | 260.14 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 221 | 260.21 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 6 |
| 227 | 260.28 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 232 | 260.38 | temperature | 30.0 | 720 | > th | dose independent | rect. | 13 | 1 |
| 233 | 260.38 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 240 | 260.53 | temperature | 30.0 | 10 | < th | dose independent | rect. | 7 | 23 |
| 242 | 260.63 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 249 | 260.71 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 250 | 260.75 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 251 | 260.77 | wind | 9.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 256 | 260.77 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 260 | 260.77 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 266 | 260.77 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 267 | 260.77 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 275 | 260.82 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 277 | 260.82 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 278 | 260.82 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 282 | 260.82 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 283 | 260.82 | radiation | 20.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 286 | 260.82 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 1 |
| 287 | 260.82 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 288 | 260.82 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 292 | 260.93 | radiation | 1.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 295 | 260.96 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 343 | 261.80 | temperature | 25.0 | 270 | > th | dose dependent | sin | 13 | NA |
| 353 | 262.16 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 356 | 262.26 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 384 | 262.85 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 10 |
| 394 | 263.07 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 18 | 13 |
| 424 | 263.62 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 427 | 263.69 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 432 | 263.87 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 440 | 263.97 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 20 | 20 |
| 444 | 264.01 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 9 |
| 456 | 264.23 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 20 |
| 472 | 264.63 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 476 | 264.71 | temperature | 25.0 | 10 | > th | dose independent | rect. | 2 | 9 |
| 523 | 265.26 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 18 | 11 |
| 529 | 265.32 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 530 | 265.34 | wind | 9.0 | 4320 | > th | dose independent | rect. | 20 | 20 |
| 611 | 265.61 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 633 | 266.06 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 657 | 266.39 | humidity | 90.0 | 30 | < th | dose independent | rect. | 2 | 5 |
| 665 | 266.48 | wind | 9.0 | 4320 | > th | dose independent | rect. | 7 | 9 |
| 677 | 266.55 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 22 | 8 |
| 705 | 266.77 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 7 |
| 720 | 267.04 | temperature | 25.0 | 30 | < th | dose independent | rect. | 18 | 8 |
| 734 | 267.22 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 1 |
| 739 | 267.26 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 752 | 267.37 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 6 |
| 783 | 267.70 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 810 | 267.95 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 815 | 267.96 | wind | 9.0 | 4320 | < th | dose independent | rect. | 20 | 20 |
| 825 | 268.00 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 865 | 268.34 | wind | 3.0 | 720 | > th | dose independent | rect. | 2 | 1 |
| 878 | 268.46 | wind | 9.0 | 4320 | < th | dose independent | rect. | 8 | 8 |
| 904 | 268.67 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 919 | 268.79 | wind | 9.0 | 4320 | < th | dose independent | rect. | 5 | 11 |
| 935 | 268.88 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 17 |
| 960 | 269.04 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 11 |
| 978 | 269.17 | temperature | 20.0 | 30 | > th | dose independent | rect. | 22 | 8 |
| 989 | 269.30 | wind | 3.0 | 720 | < th | dose dependent | rect. | 24 | 4 |