BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0129900 Os04g0129900|J065054K15
(564 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0129900 Dynamin family protein 1053 0.0
Os03g0260000 Dynamin family protein 771 0.0
Os04g0129800 195 6e-50
Os01g0920400 Similar to Dynamin-related protein 3A (Dynamin... 142 8e-34
Os04g0381000 Dynamin family protein 141 2e-33
AK111167 135 6e-32
Os09g0572900 Similar to Dynamin-related protein 1E (Dynamin... 132 6e-31
Os10g0567800 Similar to Dynamin-related protein 1E (Dynamin... 130 3e-30
Os05g0556100 Similar to SDL5A 127 2e-29
AK110298 120 4e-27
Os01g0681100 Similar to Dynamin-related protein 1B (Dynamin... 93 5e-19
Os01g0748000 Dynamin family protein 82 1e-15
>Os04g0129900 Dynamin family protein
Length = 564
Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/564 (92%), Positives = 521/564 (92%)
Query: 1 MHLRIDXXXXXXXXXXXXXXXDVKGGIARSAMAASYNDQIRPLLDAVDRLRQLNVSQEGI 60
MHLRID DVKGGIARSAMAASYNDQIRPLLDAVDRLRQLNVSQEGI
Sbjct: 1 MHLRIDEEAAAGAEQEEMEEEDVKGGIARSAMAASYNDQIRPLLDAVDRLRQLNVSQEGI 60
Query: 61 QLPTIVVVGDQSSGKSSVLESLAGISLPRGQGICTRVPLVMRLQDAGDDDEPALRLEYSG 120
QLPTIVVVGDQSSGKSSVLESLAGISLPRGQGICTRVPLVMRLQDAGDDDEPALRLEYSG
Sbjct: 61 QLPTIVVVGDQSSGKSSVLESLAGISLPRGQGICTRVPLVMRLQDAGDDDEPALRLEYSG 120
Query: 121 GRVVATSXXXXXXXXXXXXXXXXGCGKGISNAPITLVVRKKGVPDLTLVDLPGITRVPVK 180
GRVVATS GCGKGISNAPITLVVRKKGVPDLTLVDLPGITRVPVK
Sbjct: 121 GRVVATSEAEVADAINAATAEIAGCGKGISNAPITLVVRKKGVPDLTLVDLPGITRVPVK 180
Query: 181 GQPEDIYDQIAGIIKAYIAPRESIILNVLSATVDFPTCESIRMSQQVDRTGNRTLAVVTK 240
GQPEDIYDQIAGIIKAYIAPRESIILNVLSATVDFPTCESIRMSQQVDRTGNRTLAVVTK
Sbjct: 181 GQPEDIYDQIAGIIKAYIAPRESIILNVLSATVDFPTCESIRMSQQVDRTGNRTLAVVTK 240
Query: 241 SDKAPEGLLEKVTVDDVRIGLGYVCVRNRIGDETYKXXXXXXXXXXXXHPLLSRIDKSMV 300
SDKAPEGLLEKVTVDDVRIGLGYVCVRNRIGDETYK HPLLSRIDKSMV
Sbjct: 241 SDKAPEGLLEKVTVDDVRIGLGYVCVRNRIGDETYKEAREAEARLFAEHPLLSRIDKSMV 300
Query: 301 GVPTLARRLTQIQARIIARSLPDIVKQINDKLSRSSDELGQMPPELCTVADAVREFFHIV 360
GVPTLARRLTQIQARIIARSLPDIVKQINDKLSRSSDELGQMPPELCTVADAVREFFHIV
Sbjct: 301 GVPTLARRLTQIQARIIARSLPDIVKQINDKLSRSSDELGQMPPELCTVADAVREFFHIV 360
Query: 361 NQMRASLEKVLVRGEFDEYPNDRHHHGTARLAKMLEGFARRLPAAAATDGEPFLVEEMRV 420
NQMRASLEKVLVRGEFDEYPNDRHHHGTARLAKMLEGFARRLPAAAATDGEPFLVEEMRV
Sbjct: 361 NQMRASLEKVLVRGEFDEYPNDRHHHGTARLAKMLEGFARRLPAAAATDGEPFLVEEMRV 420
Query: 421 LKETKGINLPNFMPRSALHVLLNRKVKSIAQVPHDLVRQVWDYVEDLVLKELQRHSRSYP 480
LKETKGINLPNFMPRSALHVLLNRKVKSIAQVPHDLVRQVWDYVEDLVLKELQRHSRSYP
Sbjct: 421 LKETKGINLPNFMPRSALHVLLNRKVKSIAQVPHDLVRQVWDYVEDLVLKELQRHSRSYP 480
Query: 481 QVQPSCRPAVQSLMDKARERSARYVNELIDMEMVANYTANPEYIKTWTSMMDGQSRLREA 540
QVQPSCRPAVQSLMDKARERSARYVNELIDMEMVANYTANPEYIKTWTSMMDGQSRLREA
Sbjct: 481 QVQPSCRPAVQSLMDKARERSARYVNELIDMEMVANYTANPEYIKTWTSMMDGQSRLREA 540
Query: 541 LEDRSKPVAKVYSVWGVHMNPLNS 564
LEDRSKPVAKVYSVWGVHMNPLNS
Sbjct: 541 LEDRSKPVAKVYSVWGVHMNPLNS 564
>Os03g0260000 Dynamin family protein
Length = 678
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/524 (71%), Positives = 433/524 (82%), Gaps = 3/524 (0%)
Query: 27 IARSAMAASYNDQIRPLLDAVDRLRQLNVSQEGIQLPTIVVVGDQSSGKSSVLESLAGIS 86
+ SA+A SYNDQIRPLLDAVDRLR L V+QEGIQLPTIVVVGDQSSGKSSVLESLAGIS
Sbjct: 31 VTSSAIAESYNDQIRPLLDAVDRLRHLKVTQEGIQLPTIVVVGDQSSGKSSVLESLAGIS 90
Query: 87 LPRGQGICTRVPLVMRLQDAGDDDEPALRLEYSGGRVVATSXXXXXXXXXXXXXXXXGCG 146
LPRGQGICTRVPLVMRLQD D P L+LEYS GRVV TS G G
Sbjct: 91 LPRGQGICTRVPLVMRLQDDPSADSPKLQLEYSNGRVVTTSEAKVADAINAATAEIAGSG 150
Query: 147 KGISNAPITLVVRKKGVPDLTLVDLPGITRVPVKGQPEDIYDQIAGIIKAYIAPRESIIL 206
KGIS+APITLVVRK+GVPDLTLVDLPGITRVPV+GQP+DIYDQIA IIK YIAP+ESIIL
Sbjct: 151 KGISDAPITLVVRKRGVPDLTLVDLPGITRVPVQGQPDDIYDQIAKIIKEYIAPKESIIL 210
Query: 207 NVLSATVDFPTCESIRMSQQVDRTGNRTLAVVTKSDKAPEGLLEKVTVDDVRIGLGYVCV 266
NVLSATVDFPTCESIRMSQQVDRTG RTLAVVTK+DKAPEGLLEKVT+DDV IGLGYVCV
Sbjct: 211 NVLSATVDFPTCESIRMSQQVDRTGERTLAVVTKADKAPEGLLEKVTMDDVNIGLGYVCV 270
Query: 267 RNRIGDETYKXXXXXXXXXXXXHPLLSRIDKSMVGVPTLARRLTQIQARIIARSLPDIVK 326
RNRIG+ETY HPLLS+IDKSMVG+P LA+RL QIQA IIA+ LPDIVK
Sbjct: 271 RNRIGEETYDQARIEEERLFKYHPLLSKIDKSMVGIPVLAQRLMQIQATIIAKCLPDIVK 330
Query: 327 QINDKLSRSSDELGQMPPELCTVADAVREFFHIVNQMRASLEKVLVRGEFDEYPNDRHHH 386
QIND+LSR S EL QMPP+L VADAVR FFHIV Q+ ASLEKVLVRGEFDE+P+DRH H
Sbjct: 331 QINDRLSRHSSELDQMPPDLNNVADAVRAFFHIVKQVCASLEKVLVRGEFDEFPDDRHFH 390
Query: 387 GTARLAKMLEGFARRLPA---AAATDGEPFLVEEMRVLKETKGINLPNFMPRSALHVLLN 443
GTAR+A+ ++G+ RRLPA ++ D FL+EE+RVL+ETKGINLPNF+PRSA VLL
Sbjct: 391 GTARIAEKMDGYKRRLPAECPKSSDDDAMFLMEEVRVLEETKGINLPNFLPRSAFLVLLK 450
Query: 444 RKVKSIAQVPHDLVRQVWDYVEDLVLKELQRHSRSYPQVQPSCRPAVQSLMDKARERSAR 503
+KV+++ VPH+LV +VW YVED+V+ L +HS ++PQVQPSCR AVQ+LMDKAR RSA+
Sbjct: 451 KKVETVMHVPHELVNEVWGYVEDVVMNILLKHSENFPQVQPSCRRAVQTLMDKARARSAQ 510
Query: 504 YVNELIDMEMVANYTANPEYIKTWTSMMDGQSRLREALEDRSKP 547
+V ELI+ME+V++YTANP+Y++TWT +M+G EA+ED SKP
Sbjct: 511 HVKELIEMELVSDYTANPDYMRTWTEIMEGHDSFMEAVEDGSKP 554
>Os04g0129800
Length = 332
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 119/175 (68%), Gaps = 31/175 (17%)
Query: 327 QINDKLSRSSDELGQMPPELCTVADAVREFFHIVNQMRASLEKVLVRGEFDEYPNDRHHH 386
QINDKLS SSDEL QMPP+LCTVADAVREFFHI+ Y + H
Sbjct: 17 QINDKLSHSSDELSQMPPKLCTVADAVREFFHII------------------YAGEGAHQ 58
Query: 387 GTARLAKMLEGFARR--LPAAAATDGEPFLVEEMRVLKETKGINLPNFMPRSALHVLLNR 444
G F +R L + +D EPFL EEMRVL+ETKGINLPN M RS LH LLN+
Sbjct: 59 GR---------FQQRASLKSTRVSDDEPFLAEEMRVLEETKGINLPNVMLRSVLHNLLNQ 109
Query: 445 KVKSIAQVPHDLVRQVWDYVEDLVLKELQRHSRSYPQVQPSCRPAVQSL--MDKA 497
K++SIA VPHDLVRQVWDYVEDLV+K LQ HS SYPQVQ SCR AVQSL MDKA
Sbjct: 110 KIESIAHVPHDLVRQVWDYVEDLVVKVLQHHSWSYPQVQLSCRRAVQSLNVMDKA 164
>Os01g0920400 Similar to Dynamin-related protein 3A (Dynamin-like protein 2)
(Dynamin-like protein 2a). Splice isoform 2
Length = 818
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 143/518 (27%), Positives = 235/518 (45%), Gaps = 42/518 (8%)
Query: 48 DRLRQLNVSQEGIQLPTIVVVGDQSSGKSSVLESLAGIS-LPRGQGICTRVPLVMRL--- 103
D QL S I LP + VVG QSSGKSSVLE+L G LPRG ICTR PLV++L
Sbjct: 37 DIFSQLG-SSSTIDLPQVAVVGSQSSGKSSVLEALVGRDFLPRGSDICTRRPLVLQLVHQ 95
Query: 104 ----QDAGDDDEPALRLEYSGGRVVATSXXXXXXXXXXXXXXXXGCGKGISNAPITLVVR 159
DA + DE L G R G KG+S+ I L +
Sbjct: 96 PRRPADA-EADEWGEFLHLPGRRFY--DFREIRREIQAETDREAGGNKGVSDKQIRLKIY 152
Query: 160 KKGVPDLTLVDLPGITRVPVKGQPEDIYDQIAGIIKAYIAPRESIILNVLSATVDFPTCE 219
V ++TLVDLPGIT+VPV QP DI +I +I +YI + IIL V A D +
Sbjct: 153 SPNVLNITLVDLPGITKVPVGDQPTDIEARIRTMILSYIKHKTCIILAVSPANADLSNSD 212
Query: 220 SIRMSQQVDRTGNRTLAVVTKSDKAPEG------LLEKVTVDDVRIGLGYVCVRNRI--- 270
++++++ D G+RT+ V+TK D G LL V + + LGYV V NR
Sbjct: 213 ALQIARNADPDGSRTIGVITKLDIMDRGTDARNFLLGNV----IPLRLGYVGVVNRSQQD 268
Query: 271 --GDETYKXXXXXXXXXXXXHPLLSRIDKSMVGVPTLARRLTQIQARIIARSLPDIVKQI 328
D + K HP + + + G+P LA++L QI + I LP + +I
Sbjct: 269 IKSDLSIKEALAREESFFRNHPAYNGLAQ-YCGIPQLAKKLNQILVQHIKTVLPGLKSRI 327
Query: 329 NDKLSRSSDELGQMPPELCTVADAVREFFHIVNQMRASLEKVLVRGEFDEYPNDRHHHGT 388
+ +L+ ++ EL + + A + +I+ + + +V G+ +E + G
Sbjct: 328 SSQLTTTAKELSFYGDPVESKAGQGAKLLNILAKYCEAFSS-MVEGK-NEDISTIELCGG 385
Query: 389 ARLAKMLEG-FARRL----PAAAATDGEPFLVEEMRV-LKETKGINLPNFMPRSALHVLL 442
AR+ + + + + L P TD E++R+ ++ G F+P VL+
Sbjct: 386 ARIHYIFQSIYVKSLEDVDPCEDVTD------EDIRMAIQNATGPRSALFVPEVPFEVLV 439
Query: 443 NRKVKSIAQVPHDLVRQVWDYVEDLVLKELQRHSRSYPQVQPSCRPAVQSLMDKARERSA 502
R++ + ++D + + + L + +P ++ S + + + +
Sbjct: 440 RRQISRLLDPSLQCAGFIYDELVKMSHRCLAVELQQFPLLRRSMDEVIGRFLRDGLKPAQ 499
Query: 503 RYVNELIDMEMVANYTANPEYIKTWTSMMDGQSRLREA 540
+ +I+ME T++P +I ++ Q ++R +
Sbjct: 500 DMIAHIIEMEADYINTSHPNFIGGSKAVEQAQQQVRSS 537
>Os04g0381000 Dynamin family protein
Length = 797
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 204/483 (42%), Gaps = 34/483 (7%)
Query: 60 IQLPTIVVVGDQSSGKSSVLESLAGIS-LPRGQGICTRVPLVMRLQDAGDDDEPALRLEY 118
++LP + +G QSSGKSSVLE+L G LPRG ICTR PLV++L +E L
Sbjct: 43 LELPQVAAIGGQSSGKSSVLEALVGRDFLPRGPDICTRRPLVLQLVRHSAPEEWGEFLHA 102
Query: 119 SGGRVVATSXXXXXXXXXXXXXXXXGCGKGISNAPITLVVRKKGVPDLTLVDLPGITRVP 178
R G KG+S I L + V D+TLVDLPGITRVP
Sbjct: 103 PARRF--HDFDQIKREIQLETDKEAGGNKGVSEKQIRLKIFSPNVLDITLVDLPGITRVP 160
Query: 179 VKGQPEDIYDQIAGIIKAYIAPRESIILNVLSATVDFPTCESIRMSQQVDRTGNRTLAVV 238
V QP DI +I +I YI IIL V A D +++++++ D G+RT+ V+
Sbjct: 161 VGDQPSDIESRIRSMIMQYIKHPSCIILAVTPANADLANSDALQLAKLADPDGSRTIGVI 220
Query: 239 TKSDKAPEG------LLEKVTVDDVRIGLGYVCVRNRIGDETYKXXXXXXXXXXXXHPLL 292
TK D G LL V + + LGYV V NR E
Sbjct: 221 TKLDIMDRGTDARNFLLGNV----IPLKLGYVGVVNR-SQEDINFKRSVKDALAFEEKFF 275
Query: 293 SRID-----KSMVGVPTLARRLTQIQARIIARSLPDIVKQINDKLSRSSDELGQMPPELC 347
S + GVP LA++L I + I LP + +IN +L + E
Sbjct: 276 STLPAYHGLTHCCGVPQLAKKLNTILLKHITYMLPGLKSRINSQLVAVAKEHAAYGD--- 332
Query: 348 TVADAVREFFHIVNQMRASLEKVLVRGEFDEYPNDRHHHGTARLAKMLEG-FARRL---- 402
T + ++N +R E E + G AR+ + + F + L
Sbjct: 333 TAESTAGQGVKLLNILRKYCEAFSSMVEGKNKVSTDELSGGARIHYIFQSIFVKSLEEVD 392
Query: 403 PAAAATDGEPFLVEEMRV-LKETKGINLPNFMPRSALHVLLNRKVKSIAQVPHDLVRQVW 461
P + TD E++R ++ + G P F+P +L+ R++ + ++
Sbjct: 393 PCKSITD------EDIRTAIQNSDGPKGPMFLPELPFEILVRRQISRLLDPSLQCANFIY 446
Query: 462 DYVEDLVLKELQRHSRSYPQVQPSCRPAVQSLMDKARERSARYVNELIDMEMVANYTANP 521
D + + L + YP ++ AV + + + + +I+MEM T++P
Sbjct: 447 DELVKISRGCLTSELQKYPILKKRMGEAVSNFLRDGLRPAETMITHIIEMEMDYINTSHP 506
Query: 522 EYI 524
++
Sbjct: 507 NFV 509
>AK111167
Length = 795
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 156/327 (47%), Gaps = 30/327 (9%)
Query: 43 LLDAVDRLRQL---NVSQEGIQLPTIVVVGDQSSGKSSVLESLAGIS-LPRGQGICTRVP 98
LL V++L+ L + + + LP IVVVG QS+GKSSVLE++ G LPRG GI TR P
Sbjct: 8 LLRVVNQLQDLVFNTIGNDSLDLPQIVVVGSQSAGKSSVLENIVGRDFLPRGSGIVTRRP 67
Query: 99 LVMRLQDAGDDDEP--------------ALRLEYSGGRVVA----TSXXXXXXXXXXXXX 140
L+++L + +D+ A R E++ + T
Sbjct: 68 LILQLINVEEDESESNDTVHVSYQNPTQARRSEWAEFHHIPGRRFTDFGDVKREIENETS 127
Query: 141 XXXGCGKGISNAPITLVVRKKGVPDLTLVDLPGITRVPVKGQPEDIYDQIAGIIKAYIAP 200
G KGI+ PI L + V +LTLVDLPG+T+VP+ QP DI Q +I +IA
Sbjct: 128 RVAGNNKGINRQPINLKIYSPHVLNLTLVDLPGLTKVPIGDQPPDIEKQTRTLISEFIAK 187
Query: 201 RESIILNVLSATVDFPTCESIRMSQQVDRTGNRTLAVVTKSDKAPEGL--LEKVTVDDVR 258
SIIL V A VD E++++++ VD G RT+ V+TK D G ++ +T
Sbjct: 188 PNSIILAVSPANVDIVNSEALKLARHVDPLGRRTIGVLTKVDLMDHGTNAMDILTGRVYP 247
Query: 259 IGLGYVCVRNRI-----GDETYKXXXXXXXXXXXXHPLLSRIDKSMVGVPTLARRLTQIQ 313
+ LG++ V NR G++ + HP I G LA+ L Q
Sbjct: 248 LKLGFIGVVNRSQQDIQGNKPMEDALKAEMDFFRHHPAYRNI-AVKCGTQFLAKTLNQTL 306
Query: 314 ARIIARSLPDIVKQINDKLSRSSDELG 340
I LPDI ++N + ++ EL
Sbjct: 307 MSHIRERLPDIKARLNTLMGQTQQELA 333
>Os09g0572900 Similar to Dynamin-related protein 1E (Dynamin-like protein E)
(Dynamin-like protein 4) (Dynamin-like protein DLP2)
Length = 626
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 198/467 (42%), Gaps = 33/467 (7%)
Query: 62 LPTIVVVGDQSSGKSSVLESLAGIS-LPRGQGICTRVPLVMRLQ--DAGDDDEPALRLEY 118
LPTI VVG QSSGKSSVLES+ G LPRG GI TR PLV++L D G D L
Sbjct: 39 LPTIAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHQIDKGAHDYAEF-LHL 97
Query: 119 SGGRVVATSXXXXXXXXXXXXXXXXGCGKGISNAPITLVVRKKGVPDLTLVDLPGITRVP 178
R + G K IS PI L + V +LTL+DLPG+T+V
Sbjct: 98 PKTRF--SDFALVRQEIADETDRVTGKTKQISPVPIHLSIYSPNVVNLTLIDLPGLTKVA 155
Query: 179 VKGQPEDIYDQIAGIIKAYIAPRESIILNVLSATVDFPTCESIRMSQQVDRTGNRTLAVV 238
V+GQPE + I ++++Y+ IIL + A D T ++I++S++VD +G RT V+
Sbjct: 156 VEGQPESVVHDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLSKEVDPSGERTFGVL 215
Query: 239 TKSDKAPEGL--LEKVTVDDVRIGLGYVCVRNRIGDETYKXXXXXXXXXXXXHPLLSRID 296
TK D +G L+ + R+ +V + NR + + + D
Sbjct: 216 TKLDLMDKGTNALDVLEGRAYRLQYPWVGIVNRSQADINRKVDMIVAREKEREYFENSPD 275
Query: 297 ----KSMVGVPTLARRLTQIQARIIARSLPDIVKQINDKLSRSSDELGQMPPELCTVADA 352
S +G LA+ L+Q +I +P I IN + EL + E+ AD
Sbjct: 276 YAHLASKMGSVYLAKLLSQHLEAVIKARIPSITSLINKTIDELESELDTIGKEVA--ADP 333
Query: 353 VREFFHIVNQMRASLEKVLVRGEFDEYPNDRHHHGTARLAKMLEGFARRLPAAAATDGEP 412
+ + I+ RA FD + G + K+ F +LPAA P
Sbjct: 334 GAQLYTILELCRA----------FDRVFKEHLDGGRSGGDKIYGVFDHKLPAAFRK--LP 381
Query: 413 F-----LVEEMRVLKETKGINLPNFMPRSALHVLLNRKVKSIAQVPHDLVRQVWDYVEDL 467
F + +V+ E G P L+ + V V + DL
Sbjct: 382 FDRYLSVQNVKKVVSEADGYQPHLIAPEQGYRRLVEAGLAYFKGPAEATVDAVHVVLRDL 441
Query: 468 VLKELQRHS--RSYPQVQPSCRPAVQSLMDKARERSARYVNELIDME 512
V K + R +P +Q + A +++ RE L+DME
Sbjct: 442 VRKSIGETEPLRRFPTLQAAIATAANEALERFREDGRSTALRLVDME 488
>Os10g0567800 Similar to Dynamin-related protein 1E (Dynamin-like protein E)
(Dynamin-like protein 4) (Dynamin-like protein DLP2)
Length = 618
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 141/480 (29%), Positives = 202/480 (42%), Gaps = 59/480 (12%)
Query: 62 LPTIVVVGDQSSGKSSVLESLAGIS-LPRGQGICTRVPLVMRLQDAGDD-DEPALRLEYS 119
LP++ VVG QSSGKSSVLES+ G LPRG GI TR PLV++L D E A L
Sbjct: 40 LPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTEDGVQEYAEFLHMP 99
Query: 120 GGRVVATSXXXXXXXXXXXXXXXXGCGKGISNAPITLVVRKKGVPDLTLVDLPGITRVPV 179
R G K IS PI L + V +LTL+DLPG+T+V V
Sbjct: 100 KRRF--NDFALVRKEIQDETDRLTGKTKQISPVPIHLSIYSPHVVNLTLIDLPGLTKVAV 157
Query: 180 KGQPEDIYDQIAGIIKAYIAPRESIILNVLSATVDFPTCESIRMSQQVDRTGNRTLAVVT 239
+GQPE I I ++++Y+ IIL + A D T ++I++++ VD TG RT V+T
Sbjct: 158 EGQPESIVQDIENMVRSYVDKPNCIILAISPANQDIATSDAIKLARDVDPTGERTFGVLT 217
Query: 240 KSDKAPEGL--LEKVTVDDVRIGLGYVCVRNRIGDETYKX-----XXXXXXXXXXXHPLL 292
K D +G L+ + R+ +V + NR + K P
Sbjct: 218 KLDLMDKGTNALDVLEGRSYRLQHPWVGIVNRSQADINKNIDMIIARRKEQEFFASSPEY 277
Query: 293 SRIDKSMVGVPTLARRLTQIQARIIARSLPDIVKQIN---DKLSRSSDELGQMPPELCTV 349
S + M G LA+ L+Q +I +P I IN D+L D +G+
Sbjct: 278 SHLSSRM-GSEYLAKLLSQHLEAVIRARIPSITSLINKTIDELESEMDHIGR-----PIA 331
Query: 350 ADAVREFFHIVNQMRASLEKVLVRGEFDEYPNDRHHHGTARLA--KMLEGFARRLPAAAA 407
+DA + + ++ RA EK+ R H R ++ F +LP+A
Sbjct: 332 SDAGAQLYLVLELCRA-FEKIF-----------REHLDGGRPGGDRIYGVFDNQLPSALR 379
Query: 408 TDGEPF-----LVEEMRVLKETKGINLPNFMPRSALHVLLNRKVKSI---AQVPHDLVRQ 459
PF L RV+ E G P L+ + A+ D V
Sbjct: 380 K--LPFDRYLSLQNVKRVISEADGYQPHLIAPEQGYRRLIESALNYFRGPAEASVDAVH- 436
Query: 460 VWDYVEDLVLKELQRHS-------RSYPQVQPSCRPAVQSLMDKARERSARYVNELIDME 512
VLKEL R S + +P +Q A +++ RE + L+DME
Sbjct: 437 -------YVLKELVRKSIGETQELKRFPTLQAELAAACFHALERFREDGRKTTVRLVDME 489
>Os05g0556100 Similar to SDL5A
Length = 609
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 203/464 (43%), Gaps = 28/464 (6%)
Query: 62 LPTIVVVGDQSSGKSSVLESLAGIS-LPRGQGICTRVPLVMRLQDAGDDDEPALRLEYSG 120
LP I VVG QSSGKSSVLES+ G LPRG GI TR PLV++L D E A +
Sbjct: 34 LPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHRIDGDREYAEFMHLPR 93
Query: 121 GRVVATSXXXXXXXXXXXXXXXXGCGKGISNAPITLVVRKKGVPDLTLVDLPGITRVPVK 180
R T G K IS+ PI L + V +LTL+DLPG+T+V V+
Sbjct: 94 KRF--TDFALVRKEIADETDRETGRSKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVE 151
Query: 181 GQPEDIYDQIAGIIKAYIAPRESIILNVLSATVDFPTCESIRMSQQVDRTGNRTLAVVTK 240
GQP+ I I +++++I IIL V A D T ++I++S++VD G RT V+TK
Sbjct: 152 GQPDSIVQDIENMVRSFIEKPNCIILAVSPANQDLATSDAIKISREVDPKGERTFGVLTK 211
Query: 241 SDKAPEGL--LEKVTVDDVRIGLGYVCVRNRIGDETYKXXXXXXX-----XXXXXHPLLS 293
D +G ++ + R+ ++ V NR + K P
Sbjct: 212 IDLMDKGTDAVDILEGRSYRLQQQWIGVVNRSQQDINKNVDMIAARRREREYFSTTPEYK 271
Query: 294 RIDKSMVGVPTLARRLTQIQARIIARSLPDIVKQINDKLSRSSDELGQMPPELCTVADAV 353
+ M G LA+ L++ +I +P + I ++ EL ++ + T DA
Sbjct: 272 HLAHRM-GSEHLAKSLSKHLETVIKSRIPGLQSLITKTIAELETELNRLGKPIAT--DAG 328
Query: 354 REFFHIVNQMRASLEKVLVRGEFDEYPNDRHHHGTARLAKMLEGFARRLPAAAA---TDG 410
+ + I+ R + G + E+ + G K+ F + P A D
Sbjct: 329 GKLYTIMEICR------MFDGIYKEHLDGVRPGG----EKIYHVFDNQFPVAIKRLQFDK 378
Query: 411 EPFLVEEMRVLKETKGINLPNFMPRSALHVLLNRKVKSIAQVPHDLVRQVWDYVEDLVLK 470
+ + +++ E G P L+ + SI V V +++LV K
Sbjct: 379 QLAMENVKKLITEADGYQPHLIAPEQGYRRLIESCLVSIRGPAEAAVDAVHAILKELVHK 438
Query: 471 EL-QRHS-RSYPQVQPSCRPAVQSLMDKARERSARYVNELIDME 512
+ + H + +P ++ A +D+ R+ S + +L+DME
Sbjct: 439 AINETHELKQFPTLRVEVGNAAFESLDRMRDESKKNTLKLVDME 482
>AK110298
Length = 625
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 114/215 (53%), Gaps = 6/215 (2%)
Query: 61 QLPTIVVVGDQSSGKSSVLESLAGIS-LPRGQGICTRVPLVMRLQDAGD--DDEPALRLE 117
+L +IVVVG QSSGKSSVLE++ G LPRG GI TR PLV+ L D E +
Sbjct: 30 KLSSIVVVGGQSSGKSSVLEAVVGRDFLPRGTGIVTRRPLVLNLVHVDDPKAQEYGEFMH 89
Query: 118 YSGGRVVATSXXXXXXXXXXXXXXXXGCG-KGISNAPITLVVRKKGVPDLTLVDLPGITR 176
G + G K +S PI L V VP+LTLVD+PG+T+
Sbjct: 90 RQGQKFFDFDKIRQEIEDETERLLRSQPGQKTVSPVPIYLTVYSPLVPNLTLVDMPGLTK 149
Query: 177 VPVKGQPEDIYDQIAGIIKAYIAPRESIILNVLSATVDFPTCESIRMSQQVDRTGNRTLA 236
VP+ GQP I + + + YI +IIL V A D T +++R++++VD TG+RT+
Sbjct: 150 VPIDGQPLSIVQDLEEMCRQYIKGDNAIILAVTPANADLATSDALRIAREVDPTGDRTIG 209
Query: 237 VVTKSDKAPEG--LLEKVTVDDVRIGLGYVCVRNR 269
V+TK D G E + +R+ G+V V NR
Sbjct: 210 VLTKVDIMDRGTDCREILLGKSLRLKRGWVAVVNR 244
>Os01g0681100 Similar to Dynamin-related protein 1B (Dynamin-like protein B)
Length = 184
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 62 LPTIVVVGDQSSGKSSVLESLAGIS-LPRGQGICTRVPLVMRLQDAGDDDEPALRLEYSG 120
LP I VVG QSSGKSSVLES+ G LPRG GI TR PLV++L D E A E+
Sbjct: 34 LPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHRINGDREYA---EFMH 90
Query: 121 GRVVA-TSXXXXXXXXXXXXXXXXGCGKGISNAPITLVVRKKGVPDLTLVDLPGITRVPV 179
V T G K IS PI L + V DLTL+DLPG+T+V V
Sbjct: 91 NPTVKYTDFALVRKEIADETERATGHKKQISPVPIYLSIYSPNVVDLTLIDLPGLTKVAV 150
Query: 180 KGQPEDIYDQIAGIIKAYIAPRESIILNVLSATVDFP 216
+GQ + I I +++++I E ++LN L P
Sbjct: 151 EGQSDSIVQDIETMVRSFI---EKVLLNNLHKFFLLP 184
>Os01g0748000 Dynamin family protein
Length = 855
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 44 LDAVDRLRQLNVS-QEGIQLPTIVVVGDQSSGKSSVLESLAGISLP-RGQGICTRVPLVM 101
+A +RL+ V+ E + +P IV +G QS GKSS+LE+L G R + TR PLV+
Sbjct: 49 FEAYNRLQAAAVAFGEKLPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLVL 108
Query: 102 RLQDAGDDDEPALRL------EYSGGRVVATSXXXXXXXXXXXXXXXXGCGKGISNAPIT 155
++ +P R EY V+AT+ +S PI
Sbjct: 109 QMVHDPTALDPRCRFQEEDSEEYGSPMVLATAIADLIKQRTEAHLRKIQAA--VSPKPIV 166
Query: 156 LVVRKKGVPDLTLVDLPGITRVPVKGQPEDIYDQIAGIIKAYIAPRESIILNVLSATVDF 215
+ P+LT++D PG KG+PE ++I ++K+ +P ++L + ++V++
Sbjct: 167 MRAEYAYCPNLTIIDTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRLLLFLQQSSVEW 226
Query: 216 PTCESIRMS--QQVDRTGNRTLAVVTKSDKAPEGLLEKVTVDDVRIGLGYV 264
C S+ + + +D T RT+ V++K D + E VD GY+
Sbjct: 227 --CSSLWLDAIRDIDPTFRRTMIVISKFDNRLKEFTESWEVDSYLSASGYL 275
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,928,551
Number of extensions: 659811
Number of successful extensions: 1891
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1881
Number of HSP's successfully gapped: 13
Length of query: 564
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 458
Effective length of database: 11,501,117
Effective search space: 5267511586
Effective search space used: 5267511586
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)