BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0720600 Os01g0720600|AK106541
(972 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0720600 Starch synthase IVa (Glycogen (Starch) synthas... 1868 0.0
Os05g0533600 Similar to Starch synthase IVa (Glycogen (Star... 1148 0.0
Os04g0624600 Similar to Starch synthase DULL1 (Fragment) 354 2e-97
Os02g0807100 Similar to Wall-associated kinase-like protein 217 4e-56
Os06g0160700 Similar to Starch synthase I, chloroplast prec... 209 1e-53
Os06g0229800 Similar to Starch synthase IIA 190 4e-48
Os06g0133000 Granule-bound starch synthase I, chloroplast p... 186 1e-46
Os10g0437600 Similar to Starch synthase II, chloroplast pre... 182 9e-46
Os07g0412100 Similar to Granule-bound starch synthase Ib, c... 181 2e-45
Os02g0744700 Similar to Starch synthase isoform zSTSII-2 (E... 180 5e-45
AK072339 174 3e-43
>Os01g0720600 Starch synthase IVa (Glycogen (Starch) synthase-like)
Length = 972
Score = 1868 bits (4838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 899/954 (94%), Positives = 899/954 (94%)
Query: 19 CGPITRRRFAVSCRARPPGNLSAQQKKKRGKNIAPKQRSSNAKLLLTTEENGQLPSTSLR 78
CGPITRRRFAVSCRARPPGNLSAQQKKKRGKNIAPKQRSSNAKLLLTTEENGQLPSTSLR
Sbjct: 19 CGPITRRRFAVSCRARPPGNLSAQQKKKRGKNIAPKQRSSNAKLLLTTEENGQLPSTSLR 78
Query: 79 TSMERPQKSTSSEDDTNGAISQIDEKIAAIGNEQQERSKDKHFESDFQLEDFGEMIQNME 138
TSMERPQKSTSSEDDTNGAISQIDEKIAAIGNEQQERSKDKHFESDFQLEDFGEMIQNME
Sbjct: 79 TSMERPQKSTSSEDDTNGAISQIDEKIAAIGNEQQERSKDKHFESDFQLEDFGEMIQNME 138
Query: 139 KNILLLNQARLQAIEDVDKILTEKEALQKKVDTLEMNLSKALATKGNINTDIPGDHLEKF 198
KNILLLNQARLQAIEDVDKILTEKEALQKKVDTLEMNLSKALATKGNINTDIPGDHLEKF
Sbjct: 139 KNILLLNQARLQAIEDVDKILTEKEALQKKVDTLEMNLSKALATKGNINTDIPGDHLEKF 198
Query: 199 TKEILIESALSGGNPAHLCESPLFMELTVLKEENMLLKADAQFLKAKIVXXXXXXXXXXX 258
TKEILIESALSGGNPAHLCESPLFMELTVLKEENMLLKADAQFLKAKIV
Sbjct: 199 TKEILIESALSGGNPAHLCESPLFMELTVLKEENMLLKADAQFLKAKIVEFAETEEFLFK 258
Query: 259 XXXXRSLLDATVRELEARFLVAQTDIWKVVPLQYDVWMEKVENLQHMLGCLKNHVEKYAA 318
RSLLDATVRELEARFLVAQTDIWKVVPLQYDVWMEKVENLQHMLGCLKNHVEKYAA
Sbjct: 259 LEKERSLLDATVRELEARFLVAQTDIWKVVPLQYDVWMEKVENLQHMLGCLKNHVEKYAA 318
Query: 319 XXXXXXXXXXKIDELEASLKEGKTSEFSPYVVELLQQKLKAAKSHHQAGHQETNTHIQVY 378
KIDELEASLKEGKTSEFSPYVVELLQQKLKAAKSHHQAGHQETNTHIQVY
Sbjct: 319 LLDQHDDLHDKIDELEASLKEGKTSEFSPYVVELLQQKLKAAKSHHQAGHQETNTHIQVY 378
Query: 379 QQLTEEFQDNLGKLIEESGRLEHSANSMPSEFWSHILLMIDGWFLERKIPNTDARMLREM 438
QQLTEEFQDNLGKLIEESGRLEHSANSMPSEFWSHILLMIDGWFLERKIPNTDARMLREM
Sbjct: 379 QQLTEEFQDNLGKLIEESGRLEHSANSMPSEFWSHILLMIDGWFLERKIPNTDARMLREM 438
Query: 439 AWKRDDRICEAYFACKGAKESDVMETFXXXXXXXXXXXXHIVHIAAEMAPXXXXXXXXXX 498
AWKRDDRICEAYFACKGAKESDVMETF HIVHIAAEMAP
Sbjct: 439 AWKRDDRICEAYFACKGAKESDVMETFLKLSLSGNSSGLHIVHIAAEMAPVAKVGGLADV 498
Query: 499 XXXXXXXXQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFSNNVWTGTVEG 558
QTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFSNNVWTGTVEG
Sbjct: 499 VAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFSNNVWTGTVEG 558
Query: 559 LPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAF 618
LPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAF
Sbjct: 559 LPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAF 618
Query: 619 VAPLYWDIYATRGFSSARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHGR 678
VAPLYWDIYATRGFSSARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHGR
Sbjct: 619 VAPLYWDIYATRGFSSARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHGR 678
Query: 679 INVAKGGIVYSNIVTTVSPTYALEVRSEGGRGLQDTLKMHSRKFVGILNGIDTGTWNPST 738
INVAKGGIVYSNIVTTVSPTYALEVRSEGGRGLQDTLKMHSRKFVGILNGIDTGTWNPST
Sbjct: 679 INVAKGGIVYSNIVTTVSPTYALEVRSEGGRGLQDTLKMHSRKFVGILNGIDTGTWNPST 738
Query: 739 DRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIRHAIYK 798
DRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIRHAIYK
Sbjct: 739 DRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIRHAIYK 798
Query: 799 TAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFIIP 858
TAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFIIP
Sbjct: 799 TAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFIIP 858
Query: 859 SMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSS 918
SMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSS
Sbjct: 859 SMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSS 918
Query: 919 CLERAFSYYSRKPMVWKQLVQKDMQIDFSWDSPASQYENLYQSAVAQARGAAQT 972
CLERAFSYYSRKPMVWKQLVQKDMQIDFSWDSPASQYENLYQSAVAQARGAAQT
Sbjct: 919 CLERAFSYYSRKPMVWKQLVQKDMQIDFSWDSPASQYENLYQSAVAQARGAAQT 972
>Os05g0533600 Similar to Starch synthase IVa (Glycogen (Starch) synthase-like)
Length = 915
Score = 1148 bits (2969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/919 (61%), Positives = 672/919 (73%), Gaps = 37/919 (4%)
Query: 49 KNIAPKQRSSNAKLLLTTEENGQLPSTSLRTSMERPQKSTSSEDDTNGAISQIDEKIAAI 108
+ +AP ++ +LL++ + LRT+ E P+KSTS++ N Q DE +
Sbjct: 17 RRLAPSPVAARRRLLVSCRARRR----GLRTAAELPRKSTSNDKHHNRVNMQRDEASVSS 72
Query: 109 GNEQQERSKDKHFESDFQLEDFGEMIQNMEKNILLLNQARLQAIEDVDKILTEKEALQKK 168
E+QE+ D++ S+ QLED +MIQN EKNI+LLNQARLQA+E V+ +L EKE LQ+K
Sbjct: 73 DKERQEKYGDENGISNLQLEDLIQMIQNTEKNIMLLNQARLQALEHVETVLKEKEDLQRK 132
Query: 169 VDTLEMNLSKA-----LATKGNINTDIPGDHLEKFTKEILIESALSGGNPAHLCESPLFM 223
+ LE LS+ L+ +G T+I +S +
Sbjct: 133 LKILETRLSETDARLKLSAEGQFGTEIN--------------------------DSLPVL 166
Query: 224 ELTVLKEENMLLKADAQFLKAKIVXXXXXXXXXXXXXXXRSLLDATVRELEARFLVAQTD 283
EL +KEENMLLK D QFLK ++ R+LLDA++RELE+RF+ AQ D
Sbjct: 167 ELDDIKEENMLLKDDIQFLKTMLIEVAETENSIFTLEKERALLDASLRELESRFIDAQAD 226
Query: 284 IWKVVPLQYDVWMEKVENLQHMLGCLKNHVEKYAAXXXXXXXXXXKIDELEASLKEGKTS 343
+ K P QYD W EKVENL +L N VE A K+D+LEASL E S
Sbjct: 227 MLKSDPRQYDAWWEKVENLGDLLETATNKVENAAMVLGRNHDLEDKVDKLEASLAEANIS 286
Query: 344 EFSPYVVELLQQKLKAAKSHHQAGHQETNTHIQVYQQLTEEFQDNLGKLIEESGR--LEH 401
+FS Y V+LLQ+K+K+ + Q + E ++ I++Y+ EF D L KL+EE+ + LEH
Sbjct: 287 KFSCYFVDLLQEKIKSVEERFQVCNHEMHSQIELYENSIAEFHDILSKLVEETEKRSLEH 346
Query: 402 SANSMPSEFWSHILLMIDGWFLERKIPNTDARMLREMAWKRDDRICEAYFACKGAKESDV 461
SA+SMPSE WS I L+IDGW LE++I DA LREM KRD + EAY +C+G K+ ++
Sbjct: 347 SASSMPSELWSRISLLIDGWLLEKRISYNDANTLREMVRKRDSCLREAYLSCRGMKDREI 406
Query: 462 METFXXXXXXXXXXXXHIVHIAAEMAPXXXXXXXXXXXXXXXXXXQTKGHLVEIVLPKYD 521
++ F HI+HIAAEMAP Q KGHLVEI+LPKYD
Sbjct: 407 VDNFLKITLPGTSSGLHIIHIAAEMAPVAKVGGLADVISGLGKALQKKGHLVEIILPKYD 466
Query: 522 CMQLDQITNLKVLDVVIQSYFDGNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRAQYYGE 581
CMQ DQ+ NLKVLDVV+QSYF+GNLF+N +WTGTVEGLPVYFIEPQHP+KFFWRAQYYGE
Sbjct: 467 CMQNDQVNNLKVLDVVVQSYFEGNLFNNKIWTGTVEGLPVYFIEPQHPAKFFWRAQYYGE 526
Query: 582 HDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFSSARICFTC 641
HDDFKR++YFSRAALELLYQS KKIDIIHCHDWQTAFVAPLYW+ YA GF+SARICFTC
Sbjct: 527 HDDFKRFAYFSRAALELLYQSQKKIDIIHCHDWQTAFVAPLYWEAYANLGFNSARICFTC 586
Query: 642 HNFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSPTYAL 701
HNFEYQG APA DL+ CGLDV+QLDR DRM+DN+HGRINV KG IVYSNIVTTVSPTYAL
Sbjct: 587 HNFEYQGAAPAQDLACCGLDVQQLDREDRMRDNSHGRINVVKGAIVYSNIVTTVSPTYAL 646
Query: 702 EVRSEGGRGLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFL 761
EVRSEGGRGLQD+LK+HSRKFVGILNGIDT TWNPSTDR L VQY+A DLQGKAANKA L
Sbjct: 647 EVRSEGGRGLQDSLKLHSRKFVGILNGIDTDTWNPSTDRHLKVQYNANDLQGKAANKAAL 706
Query: 762 RKQLGLYSEDASQPLVACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPVPHIQREF 821
RKQL L S +ASQPLV CITRLVPQKG+HLIRHAIYKTAELGGQFVLLGSSPVPHIQREF
Sbjct: 707 RKQLNLSSTNASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREF 766
Query: 822 EGVADQFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVR 881
EG+AD FQ NNNIRL+LKYD++LSH IYAASDMFI+PSMFEPCGLTQMIAMRYGSVPIVR
Sbjct: 767 EGIADHFQNNNNIRLLLKYDDSLSHWIYAASDMFIVPSMFEPCGLTQMIAMRYGSVPIVR 826
Query: 882 QTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKD 941
+TGGL DSVFDFDDETIP ELRNGFTF DE+ LS +ERAF+YY+RKP VWKQLVQKD
Sbjct: 827 KTGGLNDSVFDFDDETIPKELRNGFTFVHPDEKALSGAMERAFNYYNRKPEVWKQLVQKD 886
Query: 942 MQIDFSWDSPASQYENLYQ 960
M+IDFSW S ASQYE++YQ
Sbjct: 887 MRIDFSWASSASQYEDIYQ 905
>Os04g0624600 Similar to Starch synthase DULL1 (Fragment)
Length = 1216
Score = 354 bits (909), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/492 (40%), Positives = 271/492 (55%), Gaps = 54/492 (10%)
Query: 478 HIVHIAAEMAPXXXXXXXXXXXXXXXXXXQTKGHLVEIVLPKYDCMQLDQITNLKVLDVV 537
HIVHIA EMAP Q GH VE++LPKYDC+ L + +L
Sbjct: 769 HIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHNVEVILPKYDCLNLSNVKDLHYR--- 825
Query: 538 IQSYFDGNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAALE 597
QS+ GN VW G VE +PVYF+EPQ + FW YG +D+ R+ +F +ALE
Sbjct: 826 -QSFTWGNT-EIKVWFGKVEDVPVYFLEPQ--NGMFWVGCVYGRNDE-SRFGFFCHSALE 880
Query: 598 LLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFSSARICFTCHNFEYQGTAPAPDLSY 657
L Q+G DIIHCHDW +A VA L+ + YA G S+ R+ FT HN E+ ++
Sbjct: 881 FLRQNGSSPDIIHCHDWSSAPVAWLFKEQYAQNGLSNGRVVFTIHNLEFGAHHIGKAMAR 940
Query: 658 CGLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSPTYALEVRSEGGRGLQDTLKM 717
C + TTVS TY+ EV G +
Sbjct: 941 C-------------------------------DKATTVSYTYSREVSGHGA------IAP 963
Query: 718 HSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDL-QGKAANKAFLRKQLGLYSEDASQPL 776
H KF GI NGID W+P +D F+ V Y++ ++ +GK+A K L+++LGL D P+
Sbjct: 964 HFSKFHGIRNGIDPDIWDPYSDNFIPVHYTSENVVEGKSAAKKALQQRLGLQQTDT--PV 1021
Query: 777 VACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGVADQF--QKNNNI 834
V I+RL QKG+HLI+HAIY+T E GQ VLLGS+P IQ +F +A + + + +
Sbjct: 1022 VGIISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAPDHRIQGDFTNLASKLHGEYHGRV 1081
Query: 835 RLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDFD 894
+L L YDE LSH IYA +D ++PSMFEPCGLTQ+ AMRYGS+PIVR+TGGL D+VFD D
Sbjct: 1082 KLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTAMRYGSIPIVRKTGGLYDTVFDVD 1141
Query: 895 DETIPVELR----NGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWDS 950
D+ + NGF+F D + L+RA + + + L ++ M+ D++W+
Sbjct: 1142 DDKDRAREQGLEPNGFSFEGADSNGVDYALDRAITTWYDARDWFHSLCKRVMEQDWTWNR 1201
Query: 951 PASQYENLYQSA 962
PA Y LY SA
Sbjct: 1202 PALDYMELYHSA 1213
>Os02g0807100 Similar to Wall-associated kinase-like protein
Length = 403
Score = 217 bits (552), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 186/324 (57%), Gaps = 9/324 (2%)
Query: 558 GLPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTA 617
G+ + IEP S +F R G DDF+R+SYFSRA+L+ + +SGK+ D++H H+W+TA
Sbjct: 6 GVSLTLIEPVQLS-YFDRDMLRGYPDDFERFSYFSRASLDYIVKSGKQPDVLHVHNWETA 64
Query: 618 FVAPLYWDIYATRGFSSARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHG 677
V PL+WDI+A +G + RI TC + Q L CGLD +L RPDR+QDN+
Sbjct: 65 IVGPLFWDIFAHQGLGNTRILLTCQDLTSQCLEVPNMLELCGLDPHKLHRPDRLQDNSET 124
Query: 678 R-INVAKGGIVYSNIVTTVSPTYALEVRSEG-GRGLQDTLKMHSRKFVGILNGIDTGTWN 735
+NV KGGIVYSN V +S T ++ +G G GL+ TL H K + +G+D W+
Sbjct: 125 NLVNVLKGGIVYSNKVLLMSSTLPRDMAIQGLGHGLEATLTTHKEKVLVASHGLDGELWD 184
Query: 736 PSTDRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIRHA 795
PS D +L +YS D++GK+ + L++ +GL+S S +V CI +R A
Sbjct: 185 PSKDIYLPQRYSPNDIEGKSFCRKTLKRCVGLHS--GSSVVVGCICN--GDSNTDGLREA 240
Query: 796 IYKTAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMF 855
+ + A GG V+ + P + + + ++ K + + + YDEAL H I+A SD+F
Sbjct: 241 V-RVALHGGAQVIFMENKGPVMNSTVQALKEEL-KGDRVMFVEIYDEALEHLIFAGSDIF 298
Query: 856 IIPSMFEPCGLTQMIAMRYGSVPI 879
+ S ++P + A++YGS P+
Sbjct: 299 LCSSFYDPSLQIAIRAIKYGSAPV 322
>Os06g0160700 Similar to Starch synthase I, chloroplast precursor (EC 2.4.1.21)
(Soluble starch synthase 1) (SSS 1)
Length = 641
Score = 209 bits (531), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 163/508 (32%), Positives = 237/508 (46%), Gaps = 33/508 (6%)
Query: 479 IVHIAAEMAPXXXXXXXXXXXXXXXXXXQTKGHLVEIVLPKYDCMQLDQ-ITNLKVLDVV 537
+V + E +P +GH V +V+P+Y L++ N +
Sbjct: 135 VVFVTGEASPYAKSGGLGDVCGSLPIALALRGHRVMVVMPRYMNGALNKNFANAFYTEKH 194
Query: 538 IQSYFDGNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEH-----DDFKRYSYFS 592
I+ G + + + F++ HPS + YG++ D+ RY+
Sbjct: 195 IKIPCFGGEHEVTFFHEYRDSVDWVFVD--HPS-YHRPGNLYGDNFGAFGDNQFRYTLLC 251
Query: 593 RAALE--LLYQSGKKIDIIHC----HDWQTAFVAPLYWDIYATRG-FSSARICFTCHNFE 645
AA E L+ + G I C +DW + V L Y G + AR HN
Sbjct: 252 YAACEAPLILELGGYIYGQKCMFVVNDWHASLVPVLLAAKYRPYGVYRDARSVLVIHNLA 311
Query: 646 YQGTAPA---PDLS-----YCGLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSP 697
+QG PA PDL Y L+ + R + +N KG +V ++ + TVS
Sbjct: 312 HQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKGAVVTADRIVTVSQ 371
Query: 698 TYALEVRS-EGGRGLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAA 756
Y+ EV + EGG+GL + L GI+NGID WNPSTD+FL YS DL GKA
Sbjct: 372 GYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDDLSGKAK 431
Query: 757 NKAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPVPH 816
KA L+K+LGL PL+ I RL QKG+ LI+ AI QFV+LGS
Sbjct: 432 CKAELQKELGL-PIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSG---- 486
Query: 817 IQREFEGVADQFQKN--NNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRY 874
FEG + + R + + +SH I A D+ ++PS FEPCGL Q+ AM+Y
Sbjct: 487 -DPGFEGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQLYAMQY 545
Query: 875 GSVPIVRQTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVW 934
G+VP+V TGGL D+V +F+ E G+ F+ + + L A S Y W
Sbjct: 546 GTVPVVHGTGGLRDTVENFNPFAEKGEQGTGWAFSPLTIEKMLWALRMAISTYREHKSSW 605
Query: 935 KQLVQKDMQIDFSWDSPASQYENLYQSA 962
+ L+++ M DF+WD ASQYE +++ A
Sbjct: 606 EGLMKRGMSSDFTWDHAASQYEQIFEWA 633
>Os06g0229800 Similar to Starch synthase IIA
Length = 810
Score = 190 bits (483), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 157/513 (30%), Positives = 230/513 (44%), Gaps = 48/513 (9%)
Query: 478 HIVHIAAEMAPXXXXXXXXXXXXXXXXXXQTKGHLVEIVLPKYDCMQLDQITNLKVLDVV 537
+++ +AAE +P +GH V +V+P+Y Q DV
Sbjct: 320 NVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQ-------DVG 372
Query: 538 IQSYFD--GNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRAQ---YYGEHDDF-KRYSYF 591
I+ Y+ G + ++G+ FI+ + F Q Y G + KR F
Sbjct: 373 IRKYYKAAGQDLEVKYFHAFIDGVDFVFID----APLFRHRQDDIYGGNRQEIMKRMILF 428
Query: 592 SRAALELLYQS-------GKKIDIIHCHDWQTAFVAPLYWDIYATRG--FSSARICFTCH 642
+AA+E+ + G + +DW TA + P+Y Y R H
Sbjct: 429 CKAAVEVPWHVPCGGVPYGDGNLVFLANDWHTALL-PVYLKAYYRDNGMMQYTRSVLVIH 487
Query: 643 NFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHG-RINVAKGGIVYSNIVTTVSPTYAL 701
N YQG P + Y L LD ++ D G N+ G+ ++ V TVSP Y
Sbjct: 488 NIAYQGRGPVDEFPYMELPEHYLDH-FKLYDPVGGEHANIFGAGLKMADRVVTVSPGYLW 546
Query: 702 EVRS-EGGRGLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLA----VQYSATDL-QGKA 755
E+++ EGG GL D ++ + K GI+NGID WNP D L Y+ L K
Sbjct: 547 ELKTTEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSKP 606
Query: 756 ANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPVP 815
KA L+++LGL D PL+ I RL QKG+ +I A+ A Q VLLGS
Sbjct: 607 RCKAALQRELGLEVRD-DVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSG--- 662
Query: 816 HIQREFEGVADQF--QKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMR 873
+R+ E + +F Q N+ +R + + ++H I A +D+ ++PS FEPCGL Q+ AM
Sbjct: 663 --RRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMA 720
Query: 874 YGSVPIVRQTGGLCDSVFDFDDETIPVELRN-GFTFARTDEQDLSSCLERAFSYYSRKPM 932
YG+VP+V GGL D++ FD P E G+TF R + L L Y +
Sbjct: 721 YGTVPVVHAVGGLRDTMSAFD----PFEDTGLGWTFDRAEPHKLIEALGHCLETYRKYKE 776
Query: 933 VWKQLVQKDMQIDFSWDSPASQYENLYQSAVAQ 965
W+ L + M D SWD A YE + A Q
Sbjct: 777 SWRGLQVRGMSQDLSWDHAAELYEEVLVKAKYQ 809
>Os06g0133000 Granule-bound starch synthase I, chloroplast precursor (EC
2.4.1.21)
Length = 609
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 149/527 (28%), Positives = 231/527 (43%), Gaps = 76/527 (14%)
Query: 478 HIVHIAAEMAPXXXXXXXXXXXXXXXXXXQTKGHLVEIVLPKYD----CMQLDQITNLKV 533
++V + AEMAP GH V ++ P+YD + +KV
Sbjct: 84 NVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKV 143
Query: 534 LD-------------VVIQSYFDGNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRAQYYG 580
D V + + D F VW T E K +
Sbjct: 144 ADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGE-------------KIYGPDTGVD 190
Query: 581 EHDDFKRYSYFSRAALEL----------LYQSGKKIDIIH-CHDWQTAFVAPLYWDIYAT 629
D+ R+S +AALE ++ D++ C+DW T +A + Y
Sbjct: 191 YKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNNYQP 250
Query: 630 RG-FSSARICFTCHNFEYQGTAP---APDLSYCGLDVEQLDRPDRMQDNAHGR-INVAKG 684
G + +A++ F HN YQG P+L+ D D GR IN K
Sbjct: 251 NGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKA 310
Query: 685 GIVYSNIVTTVSPTYALEVRSEGGRGLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAV 744
GI+ ++ V TVSP YA E+ S RG + M GI+NG+D W+PS D+++
Sbjct: 311 GILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITA 370
Query: 745 QYSATD-LQGKAANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIRHAIYKTAELG 803
+Y AT ++ KA NK L+ + GL D PL+A I RL QKG ++ AI + +
Sbjct: 371 KYDATTAIEAKALNKEALQAEAGL-PVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQED 429
Query: 804 GQFVLLGSSPVPHIQREFEGVADQFQKN--NNIRLILKYDEALSHCIYAASDMFIIPSMF 861
Q VLLG+ +++FE + ++ +R ++K++ L+H I A +D+ +PS F
Sbjct: 430 VQIVLLGTG-----KKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRF 484
Query: 862 EPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDFDDETIPVELRNGFTFAR----------T 911
EPCGL Q+ MRYG+ TGGL D+V +E + GF R +
Sbjct: 485 EPCGLIQLQGMRYGTPCACASTGGLVDTV---------IEGKTGFHMGRLSVDCKVVEPS 535
Query: 912 DEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWDSPASQYENL 958
D + +++ L+RA ++++V+ M D SW PA +EN+
Sbjct: 536 DVKKVAATLKRAIKVVGTP--AYEEMVRNCMNQDLSWKGPAKNWENV 580
>Os10g0437600 Similar to Starch synthase II, chloroplast precursor (EC 2.4.1.21)
(SS II) (GBSSII) (Granule-bound starch synthase II)
Length = 749
Score = 182 bits (463), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 229/511 (44%), Gaps = 44/511 (8%)
Query: 478 HIVHIAAEMAPXXXXXXXXXXXXXXXXXXQTKGHLVEIVLPKY----DCMQLDQITNLKV 533
+I+ +AAE AP +GH V +V+P Y + QL + +V
Sbjct: 259 NIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQV 318
Query: 534 LDVVIQSYFDGNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRAQYYG--EHDDFKRYSYF 591
++ + + ++G+ FI+ +P YG D KR
Sbjct: 319 AGQDMEVIY---------YHAYIDGVDFVFID--NPIFHHVENDIYGGDRTDILKRMVLL 367
Query: 592 SRAALELL-------YQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFS-SARICFTCHN 643
+AA+E+ Y G + +DW TA + Y GF AR HN
Sbjct: 368 CKAAIEVPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHN 427
Query: 644 FEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSPTYALEV 703
+QG P D SY L V+ +D +N+ GI ++ + TVS YA E+
Sbjct: 428 IAHQGRGPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWEL 487
Query: 704 RS-EGGRGLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLA----VQYSATDLQ-GKAAN 757
++ EGG GL + KF GI+NGIDT WNP D L YS +Q GK
Sbjct: 488 KTAEGGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQC 547
Query: 758 KAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPVPHI 817
KA L+K+LGL P++A I RL QKG+ LI A+ A Q ++LG+
Sbjct: 548 KAALQKELGLPVR-GDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTG----- 601
Query: 818 QREFEGVADQF--QKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRYG 875
+++ E + Q + +R + + L+H + A +D+ ++PS FEPCGL Q+ AM YG
Sbjct: 602 RQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYG 661
Query: 876 SVPIVRQTGGLCDSVFDFDDETIPVELRN-GFTFARTDEQDLSSCLERAFSYYSRKPMVW 934
+VP+V GGL D+V ++ P E G+TF + + L L + Y W
Sbjct: 662 TVPVVHAVGGLRDTVEHYN----PYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSW 717
Query: 935 KQLVQKDMQIDFSWDSPASQYENLYQSAVAQ 965
+ L ++ M D SWD+ A YE + +A Q
Sbjct: 718 EGLQKRGMMQDLSWDNAAKLYEEVLLAAKYQ 748
>Os07g0412100 Similar to Granule-bound starch synthase Ib, chloroplast precursor
(EC 2.4.1.21) (Fragment)
Length = 608
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 153/518 (29%), Positives = 241/518 (46%), Gaps = 59/518 (11%)
Query: 479 IVHIAAEMAPXXXXXXXXXXXXXXXXXXQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVI 538
I+ IA E P GH V ++P+YD + TN+ +++V I
Sbjct: 83 IIFIATECHPWCKTGGLGDVLGGLPPALAAMGHRVMTIVPRYDQYKDAWDTNV-LVEVNI 141
Query: 539 QSYFDGNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRA--QYYGE--HDDFK----RYSY 590
+ F + G V+ P K + + + YG DD++ R+
Sbjct: 142 GDRTETVRFFHCYKRGVDR---VFVDHPMFLEKVWGKTGPKLYGPTTGDDYRDNQLRFCL 198
Query: 591 FSRAALELL---------YQSGKKID--IIHCHDWQTAFVAPLYWDIYATRG-FSSARIC 638
AALE Y SG + + +DW T + IY +G + +A++
Sbjct: 199 LCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTGVLPCYLKSIYQAKGMYVNAKVA 258
Query: 639 FTCHNFEYQGTAPAPDLSYCGLD---VEQLDRPDRMQDNAHGR-INVAKGGIVYSNIVTT 694
F HN YQG D L + D D GR IN K GI ++V T
Sbjct: 259 FCIHNIAYQGRFAREDFELLNLPDSFLPSFDFIDGHFKPVVGRKINWMKAGITECDLVMT 318
Query: 695 VSPTYALEVRSEGGRGLQDTLKMHSRKF-VGILNGIDTGTWNPSTDRFLAVQYSATDL-Q 752
VSP Y E+ S +G++ + ++ GI+NG+D WNP+TD++++V+Y AT + +
Sbjct: 319 VSPHYVKELASGPDKGVELDGILRTKPLETGIVNGMDVYEWNPATDQYISVKYDATTVTE 378
Query: 753 GKAANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSS 812
+A NK L+ ++GL D+S PL+ + RL QKG ++ AI + E Q ++LG+
Sbjct: 379 ARALNKEMLQAEVGL-PVDSSIPLIVFVGRLEEQKGSDILIAAIPEFVEGNVQIIVLGTG 437
Query: 813 PVPHIQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAM 872
+ E E + + + NN R I K++ L+H ++A +D I+PS FEPCGL Q+ M
Sbjct: 438 ---KKKMEEELILLEVKYPNNARGIAKFNVPLAHMMFAGADFIIVPSRFEPCGLIQLQGM 494
Query: 873 RYGSVPIVRQTGGLCDSV-----------FDFDDETI-PVELRNGFTFARTDEQDLSSCL 920
RYG VPI TGGL D+V F+ + ET+ PV D ++S +
Sbjct: 495 RYGVVPICSSTGGLVDTVKEGVTGFHMGLFNVECETVDPV-----------DVTAVASTV 543
Query: 921 ERAFSYYSRKPMVWKQLVQKDMQIDFSWDSPASQYENL 958
+RA Y+ ++++VQ M D SW PA ++E +
Sbjct: 544 KRALKQYNTP--AFQEMVQNCMAQDLSWKGPAKKWEEV 579
>Os02g0744700 Similar to Starch synthase isoform zSTSII-2 (EC 2.4.1.21)
Length = 677
Score = 180 bits (456), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 150/509 (29%), Positives = 226/509 (44%), Gaps = 40/509 (7%)
Query: 478 HIVHIAAEMAPXXXXXXXXXXXXXXXXXXQTKGHLVEIVLPKYDCMQLDQITNLKVLDVV 537
+++ +A+E +P +GH V +V+P+Y + K L V
Sbjct: 187 NVIVVASECSPFCKTGGLGDVVGALPKALARRGHRVMVVIPRYG-----EYAEAKDLGVR 241
Query: 538 IQSYFDGNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEH-DDFKRYSYFSRAAL 596
+ G + + ++G+ F+E P + Y GE D KR F +AA+
Sbjct: 242 KRYRVAGQDSEVSYFHAFIDGVDFVFLEAP-PFRHRHNDIYGGERFDVLKRMILFCKAAV 300
Query: 597 EL---------LYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRG--FSSARICFTCHNFE 645
E+ +Y G + I +DW TA + P+Y Y R HN
Sbjct: 301 EVPWFAPCGGSIYGDGNLVFI--ANDWHTALL-PVYLKAYYRDNGLMQYTRSVLVIHNIA 357
Query: 646 YQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHG-RINVAKGGIVYSNIVTTVSPTYALEVR 704
+QG P D + L +D R+ D G NV G+ ++ TVS Y E++
Sbjct: 358 HQGRGPVDDFATMDLPEHYIDHF-RLYDPVGGEHSNVFAAGLKMADRAVTVSHGYLWEIK 416
Query: 705 S-EGGRGLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLA----VQYSATDLQ-GKAANK 758
+ +GG GL + + + K GI+NGID WNP D L Y+ L GK K
Sbjct: 417 TMDGGWGLHEIINHNDWKLQGIVNGIDMAEWNPEVDEHLQSDGYANYTFETLDTGKKQCK 476
Query: 759 AFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSS--PVPH 816
L++QLGL D PL+ I RL QKG+ +I A+ A Q V+LG+ +
Sbjct: 477 EALQRQLGLQVRD-DVPLIGFIGRLDHQKGVDIIGDAMPWIAGQDVQVVMLGTGRPDLEE 535
Query: 817 IQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRYGS 876
+ R FE + N+ +R + + L+H I A +D+ ++PS FEPCGL Q+ AM YG+
Sbjct: 536 MLRRFES-----EHNDKVRGWVGFSVQLAHRITAGADVLLMPSRFEPCGLNQLYAMAYGT 590
Query: 877 VPIVRQTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQ 936
VP+V GGL D+V FD + G+TF R + + L + Y W+
Sbjct: 591 VPVVHAVGGLRDTVAPFDPFA---DTGLGWTFDRAEANRMIDALGHCLNTYRNYKESWRG 647
Query: 937 LVQKDMQIDFSWDSPASQYENLYQSAVAQ 965
L + M D SWD A YE++ A Q
Sbjct: 648 LQARGMAQDLSWDHAAELYEDVLVKAKYQ 676
>AK072339
Length = 376
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/376 (33%), Positives = 181/376 (48%), Gaps = 20/376 (5%)
Query: 600 YQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFS-SARICFTCHNFEYQGTAPAPDLSYC 658
Y G + +DW TA + Y GF AR HN +QG P D SY
Sbjct: 10 YCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGRGPLDDFSYL 69
Query: 659 GLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSPTYALEVRS-EGGRGLQDTLKM 717
L V+ +D +N+ GI ++ + TVS YA E+++ EGG GL +
Sbjct: 70 DLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEGGWGLHGIINE 129
Query: 718 HSRKFVGILNGIDTGTWNPSTDRFLA----VQYSATDLQ-GKAANKAFLRKQLGLYSEDA 772
KF GI+NGIDT WNP D L YS +Q GK KA L+K+LGL
Sbjct: 130 SDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGL-PVRG 188
Query: 773 SQPLVACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGVADQF--QK 830
P++A I RL QKG+ LI A+ A Q ++LG+ +++ E + Q
Sbjct: 189 DVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTG-----RQDLEDTLRRLESQH 243
Query: 831 NNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSV 890
+ +R + + L+H + A +D+ ++PS FEPCGL Q+ AM YG+VP+V GGL D+V
Sbjct: 244 YDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTV 303
Query: 891 FDFDDETIPVELRN-GFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWD 949
++ P E G+TF + + L L + Y W+ L ++ M D SWD
Sbjct: 304 EHYN----PYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWD 359
Query: 950 SPASQYENLYQSAVAQ 965
+ A YE + +A Q
Sbjct: 360 NAAKLYEEVLLAAKYQ 375
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 29,540,268
Number of extensions: 1196627
Number of successful extensions: 3200
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 3151
Number of HSP's successfully gapped: 13
Length of query: 972
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 862
Effective length of database: 11,292,261
Effective search space: 9733928982
Effective search space used: 9733928982
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 161 (66.6 bits)