BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0546800 Os01g0546800|AK066636
(364 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0546800 Virulence factor, pectin lyase fold family pro... 640 0.0
Os01g0837100 380 e-106
Os06g0144900 Similar to Pectate lyase homolog (EC 4.2.2.2) 164 7e-41
Os02g0214400 Similar to Pectate lyase homolog (EC 4.2.2.2) ... 154 8e-38
Os04g0137100 Similar to Pectate lyase (Fragment) 152 4e-37
Os06g0144200 Similar to Pectate lyase homolog (EC 4.2.2.2) 151 9e-37
Os06g0145100 Similar to Pectate lyase homolog (EC 4.2.2.2) 150 1e-36
Os10g0457200 Virulence factor, pectin lyase fold family pro... 146 2e-35
Os06g0583900 Similar to Pectate lyase homolog (EC 4.2.2.2) ... 136 3e-32
Os05g0293500 Similar to Pectate lyase B (Fragment) 135 6e-32
Os08g0286100 130 2e-30
>Os01g0546800 Virulence factor, pectin lyase fold family protein
Length = 364
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/325 (96%), Positives = 314/325 (96%)
Query: 40 VMPYADADRTLRALAGAAEGFGRRAIGGLHGPLYRVTSLDDDGHGTLRQACRAHGPLWIV 99
VMPYADADRTLRALAGAAEGFGRRAIGGLHGPLYRVTSLDDDGHGTLRQACRAHGPLWIV
Sbjct: 40 VMPYADADRTLRALAGAAEGFGRRAIGGLHGPLYRVTSLDDDGHGTLRQACRAHGPLWIV 99
Query: 100 FDVSGDIHLRTYLRVTSHKTIDGRGQRVRLLGKGLQLKECRHVIVCNLQIEGGRGHDVDA 159
FDVSGDIHLRTYLRVTSHKTIDGRGQRVRLLGKGLQLKECRHVIVCNLQIEGGRGHDVDA
Sbjct: 100 FDVSGDIHLRTYLRVTSHKTIDGRGQRVRLLGKGLQLKECRHVIVCNLQIEGGRGHDVDA 159
Query: 160 IQIKPSSADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDKTMLVGADPSHTGDR 219
IQIKPSSADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDKTMLVGADPSHTGDR
Sbjct: 160 IQIKPSSADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDKTMLVGADPSHTGDR 219
Query: 220 GIRVTVHHCFFDGTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGVEAQVASQCNVYEAGA 279
GIRVTVHHCFFDGTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGVEAQVASQCNVYEAGA
Sbjct: 220 GIRVTVHHCFFDGTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGVEAQVASQCNVYEAGA 279
Query: 280 ERKAVFRYVPXXXXXXXXXXXGWVRSEGDAFLNGARPCLVDGGDAAVFRPEEYYERWTME 339
ERKAVFRYVP GWVRSEGDAFLNGARPCLVDGGDAAVFRPEEYYERWTME
Sbjct: 280 ERKAVFRYVPERAADREEAEAGWVRSEGDAFLNGARPCLVDGGDAAVFRPEEYYERWTME 339
Query: 340 AASPALKEVVQLCAGWQPVPRPPGE 364
AASPALKEVVQLCAGWQPVPRPPGE
Sbjct: 340 AASPALKEVVQLCAGWQPVPRPPGE 364
>Os01g0837100
Length = 343
Score = 380 bits (977), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 226/328 (68%), Gaps = 33/328 (10%)
Query: 41 MPYADADRTLRALAGAAEGFGRRAIGGLHGPLYRVTSLDDDGHGTLRQACRAHGPLWIVF 100
MPYA AD +LR +A DDG G+LR+ CR PLWIVF
Sbjct: 24 MPYATADSSLRVMA-------------------------DDGDGSLREGCRRREPLWIVF 58
Query: 101 DVSGDIHLRTYLRVTSHKTIDGRGQRVRLLGKGLQLKECRHVIVCNLQIEGGRGHDVDAI 160
DVSG IHL T LRV+S+KTIDGRGQRV L GKGLQL+EC HVIVCNL++EG RGHD DA+
Sbjct: 59 DVSGTIHLSTGLRVSSYKTIDGRGQRVTLSGKGLQLRECEHVIVCNLEVEGCRGHDADAV 118
Query: 161 QIKPSSADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDKTMLVGADPSHTGDRG 220
+KP S +WIDRC L C DGL+D+TRGSTDVTVSRCRFS HDK +L+G H DR
Sbjct: 119 AVKPGSRHVWIDRCGLRGCGDGLLDVTRGSTDVTVSRCRFSAHDKAVLIGGSAGHVEDRA 178
Query: 221 IRVTVHHCFFDGTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGVEAQVASQCNVYEAGAE 280
IRVT+HHC FDGTRQRHPRVRFGR HLYNNYTRGWGIYAV A VE+Q+ SQCN+YEAG E
Sbjct: 179 IRVTIHHCLFDGTRQRHPRVRFGRVHLYNNYTRGWGIYAVCASVESQIVSQCNIYEAG-E 237
Query: 281 RKAVFRYVPXXXXXXXXXXXGWVRSEGDAFLNGARPCLVDGGDAAV-----FRPEE--YY 333
+K VF+Y+ G++RSEGD FLNGA C +AA F+ +E +Y
Sbjct: 238 KKKVFKYMIEQAADRDQSSTGFIRSEGDLFLNGAEECTAQDSEAAADELWDFKIQELDFY 297
Query: 334 ERWTMEAASPALKEVVQLCAGWQPVPRP 361
+ +++ AS ALKE+++ GWQPVP P
Sbjct: 298 QSCSVQPASMALKELLECFTGWQPVPLP 325
>Os06g0144900 Similar to Pectate lyase homolog (EC 4.2.2.2)
Length = 448
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 147/289 (50%), Gaps = 28/289 (9%)
Query: 51 RALAGAAEGFGRRAIGGLHGPLYRVTSLDDDG-----HGTLRQACRAHGPLWIVFDVSGD 105
+ LA A GFG +A GGL G +Y VT D+ GTLR A PLWIVF S
Sbjct: 118 KRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRGTLRHAVIQERPLWIVFARSMV 177
Query: 106 IHLRTYLRVTSHKTIDGRGQRVRLLGKGLQLKECRHVIVCNLQIE--------------- 150
I L L VTS KTIDGRG +V + G + ++ +VI+ NL I
Sbjct: 178 IRLAKELIVTSDKTIDGRGAQVHVTGAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSMH 237
Query: 151 --GGRGH-DVDAIQIKPSSADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDKTM 207
G RG D D I + SS +IWID S+++C DGL+DIT GST +T+S F++HD M
Sbjct: 238 HFGIRGESDGDGISVMGSS-NIWIDHVSMSNCSDGLIDITDGSTAITISNSHFTKHDHVM 296
Query: 208 LVGADPSHTGDRGIRVTVHHCFF-DGTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGVEA 266
L GA D+ ++VT+ F G QR PR RFG H+ NN W +YA+ +
Sbjct: 297 LFGARDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFGFFHMVNNDYTHWLMYAIGGNMNP 356
Query: 267 QVASQCNVYEAGAERKAVFRYVPXXXXXXXXXXXGWV-RSEGDAFLNGA 314
+ SQ N + A + K + V WV +S+ D FLNGA
Sbjct: 357 TIISQGNRFRASDDMK--LKEVTKREYTSYDEYKEWVWKSQDDLFLNGA 403
>Os02g0214400 Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment)
Length = 446
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 157/329 (47%), Gaps = 43/329 (13%)
Query: 51 RALAGAAEGFGRRAIGGLHGPLYRVTSLDDDG-----HGTLRQACRAHGPLWIVFDVSGD 105
+ LA A GFGR A GG+ G +Y VT D +GTLR PLWI F S
Sbjct: 115 KRLARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYGTLRWGAMQAAPLWITFAKSMV 174
Query: 106 IHLRTYLRVTSHKTIDGRGQRVRLL--GKGLQLKECRHVIVCNLQIEGGRGHDVDAIQIK 163
I L L V S KTIDGRG +V + G G+ ++ R+VI+ +L + + D A++
Sbjct: 175 IRLTQELLVASDKTIDGRGAQVHIARGGAGITVQFARNVIITSLHVHDVKHSDGGAVRDS 234
Query: 164 PS-----------------SADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDKT 206
P+ + D+W+D S++ C+DGL+D+ +GST VT+S F+ H+
Sbjct: 235 PTHIGPRTRADGDGISLFAATDVWVDHVSMSMCEDGLIDVVQGSTGVTISNSHFTNHNDV 294
Query: 207 MLVGADPSHTGDRGIRVTVHHCFFD-GTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGVE 265
ML GA S+ D+ +++TV F G QR PR R+G H+ NN W +YA+ G+
Sbjct: 295 MLFGASDSYPQDKVMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGGMS 354
Query: 266 AQVASQCNVYEAG---AERKAVFRYVPXXXXXXXXXXXGWV-RSEGDAFLNGARPCL--- 318
+ SQ N Y A A + Y P W RS+GD F+NGA
Sbjct: 355 PTILSQGNRYIAPPNIAAKLITRHYAP------EWEWKNWAWRSDGDLFMNGAYFQASNG 408
Query: 319 -----VDGGDAAVFRPEEYYERWTMEAAS 342
V G D +P Y R T A +
Sbjct: 409 AINRKVKGSDMVKPKPGSYVRRLTRFAGA 437
>Os04g0137100 Similar to Pectate lyase (Fragment)
Length = 492
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 142/295 (48%), Gaps = 27/295 (9%)
Query: 45 DADRTLRALAGAAEGFGRRAIGGLHGPLYRVTSLDDD-----GHGTLRQACRAHGPLWIV 99
D + + LA GFGR AIGG G +Y VT DD GTLR A PLWIV
Sbjct: 136 DWHKNRQRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIV 195
Query: 100 FDVSGDIHLRTYLRVTSHKTIDGRGQRVRLL-GKGLQLKECRHVIVCNLQIEGGRGHDVD 158
F I L+ L + S KTIDGRG V + G + ++ +VI+ L I R
Sbjct: 196 FKRDMVITLKQELIMNSFKTIDGRGANVHIANGACITIQYVTNVIIHGLHIHDCRPTGNA 255
Query: 159 AIQIKPS-----------------SADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFS 201
++ PS ++ IW+D CSL++C DGL+D GST +TVS F+
Sbjct: 256 MVRSSPSHYGWRTMADGDAVSIFGASHIWVDHCSLSNCADGLIDAIMGSTAITVSNNYFT 315
Query: 202 RHDKTMLVGADPSHTGDRGIRVTVHHCFF-DGTRQRHPRVRFGRAHLYNNYTRGWGIYAV 260
H++ ML+G S+ D+ ++VT+ F +G QR PR R G H+ NN W +YA+
Sbjct: 316 HHNEVMLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAI 375
Query: 261 AAGVEAQVASQCNVYEAGAERKAVFRYVPXXXXXXXXXXXGWV-RSEGDAFLNGA 314
E + SQ N Y A A + V GW RSEGD LNGA
Sbjct: 376 GGSAEPTINSQGNRYLAPTNPFA--KEVTKRVETAQTIWKGWNWRSEGDLLLNGA 428
>Os06g0144200 Similar to Pectate lyase homolog (EC 4.2.2.2)
Length = 450
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 139/288 (48%), Gaps = 29/288 (10%)
Query: 51 RALAGAAEGFGRRAIGGLHGPLYRVTSLDDDG-----HGTLRQACRAHGPLWIVFDVSGD 105
+ LA GFG R +GG G +Y VT DD GTLR P+WIVF
Sbjct: 123 KRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGTLRYGVIQDRPMWIVFARDMI 182
Query: 106 IHLRTYLRVTSHKTIDGRGQRVRLLGKGLQLKECRHVIVCNLQIEGGRGH---------- 155
I LR L V +KTIDGRG +V + G + L+ +HVI+ N+ I H
Sbjct: 183 IQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQHVIIHNVHIHHSVPHGGGMIRDSKR 242
Query: 156 --------DVDAIQIKPSSADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDKTM 207
D D I I SS++IWID S+++C DGL+D GST +T+S F++HD M
Sbjct: 243 HYGLRTRSDGDGISIM-SSSNIWIDHVSMSNCSDGLIDAVSGSTAITISNGHFTKHDHVM 301
Query: 208 LVGADPSHTGDRGIRVTVHHCFFDGTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGVEAQ 267
L GA S D +++TV F + PR RFG H+ NN W +YA+ +
Sbjct: 302 LFGASNSDAQDEVMQITV--AFNHFGKGLVPRCRFGFFHVVNNDYTHWLMYAIGGNMNPT 359
Query: 268 VASQCNVYEAGAERKAVFRYVPXXXXXXXXXXXGWV-RSEGDAFLNGA 314
+ SQ N + A + A + V WV +S+GD +NGA
Sbjct: 360 IISQGNRFIAPDDLNA--KEVTKREYTPYDEYKEWVWKSQGDVMMNGA 405
>Os06g0145100 Similar to Pectate lyase homolog (EC 4.2.2.2)
Length = 348
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 139/288 (48%), Gaps = 29/288 (10%)
Query: 51 RALAGAAEGFGRRAIGGLHGPLYRVTSLDDDG-----HGTLRQACRAHGPLWIVFDVSGD 105
+ LA GFG R +GG G +Y VT DD GTLR P+WIVF
Sbjct: 21 KRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGTLRYGVIQDRPMWIVFARDMI 80
Query: 106 IHLRTYLRVTSHKTIDGRGQRVRLLGKGLQLKECRHVIVCNLQIEGGRGH---------- 155
I LR L V +KTIDGRG +V + G + L+ +HVI+ N+ I H
Sbjct: 81 IQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQHVIIHNVHIHHSVPHGGGMIRDSKR 140
Query: 156 --------DVDAIQIKPSSADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDKTM 207
D D I I SS++IWID S+++C DGL+D GST +T+S F++HD M
Sbjct: 141 HYGLRTRSDGDGISIM-SSSNIWIDHVSMSNCSDGLIDAVSGSTAITISNGHFTKHDHVM 199
Query: 208 LVGADPSHTGDRGIRVTVHHCFFDGTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGVEAQ 267
L GA S D +++TV F + PR RFG H+ NN W +YA+ +
Sbjct: 200 LFGASNSDAQDEVMQITV--AFNHFGKGLVPRCRFGFFHVVNNDYTHWLMYAIGGNMNPT 257
Query: 268 VASQCNVYEAGAERKAVFRYVPXXXXXXXXXXXGWV-RSEGDAFLNGA 314
+ SQ N + A + A + V WV +S+GD +NGA
Sbjct: 258 IISQGNRFIAPDDLNA--KEVTKREYTPYDEYKEWVWKSQGDVMMNGA 303
>Os10g0457200 Virulence factor, pectin lyase fold family protein
Length = 446
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 138/289 (47%), Gaps = 30/289 (10%)
Query: 53 LAGAAEGFGRRAIGGLHGPLYRVTSLDD-----DGHGTLRQACRAHGPLWIVFDVSGDIH 107
LA GFGR A+GG GP+Y VT D GTLR GPLWIVF I
Sbjct: 93 LADCGIGFGRNAMGGKGGPVYVVTDPSDGDPVNPAPGTLRYGAIQEGPLWIVFAGDMTIR 152
Query: 108 LRTYLRVTSHKTIDGRGQRVRLLGKG--LQLKECRHVIVCNLQIE----GGRGH------ 155
L L V S+KTIDGRG V + G + L+ +VI+ N+ + G +
Sbjct: 153 LNEELLVNSYKTIDGRGANVHVGAGGACITLQYVSNVIIHNIHVHDCVPAGNANVRASPT 212
Query: 156 --------DVDAIQIKPSSADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDKTM 207
D D I + S+ D+W+D C+L+ C DGL+D GST +TVS FS H++ M
Sbjct: 213 HYGWRTRSDGDGISLY-SARDVWVDHCALSRCADGLIDAIMGSTAITVSNSYFSHHNEVM 271
Query: 208 LVGADPSHTGDRGIRVTVHHCFFD-GTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGVEA 266
L+G + D ++VT+ F QR PR R G H+ NN W +YA+
Sbjct: 272 LLGHSDGYLPDSAMQVTIAFNHFGIQLVQRMPRCRRGYFHIVNNDYTAWEMYAIGGSASP 331
Query: 267 QVASQCNVYEAGAERKAVFRYVPXXXXXXXXXXXGWV-RSEGDAFLNGA 314
+ SQ N Y A A+ A + V GW R+EGD +NGA
Sbjct: 332 TINSQGNRYIAPADPNA--KEVTKRVDTEEGQWAGWNWRTEGDMMVNGA 378
>Os06g0583900 Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment)
Length = 448
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 135/291 (46%), Gaps = 31/291 (10%)
Query: 51 RALAGAAEGFGRRAIGGLHGPLYRVTSLDDDG-----HGTLRQACRAHGPLWIVFDVSGD 105
+ LA A+GFGR GGL G Y VT DD GTLR PLWI+F
Sbjct: 117 KRLARCAQGFGRNTTGGLAGKFYLVTDGTDDDVENPRPGTLRWGVIQDEPLWIIFAKDMI 176
Query: 106 IHLRTYLRVTSHKTIDGRGQRVRLLGKGLQLK--------ECRHVIVCNLQIEGGRGHDV 157
I+L+ + + S KTIDGRG +VR+ G Q+ I LQ +GG D
Sbjct: 177 INLKEEMMINSDKTIDGRGAQVRIT-NGAQVTVQNSNNVIIHNIHIHDILQGKGGMIRDS 235
Query: 158 ------------DAIQIKPSSADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDK 205
D I I S ++W+D SL++C DGL+D+ ST VT+S C + H+
Sbjct: 236 PEHFGFRTQSDGDGISIF-GSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHND 294
Query: 206 TMLVGADPSHTGDRGIRVTVHHCFFD-GTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGV 264
ML G+ S + D+ +++TV F G QR PR R+G H+ NN W +YA+
Sbjct: 295 VMLFGSSDSFSEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSK 354
Query: 265 EAQVASQCNVYEAGAERKAVFRYVPXXXXXXXXXXXGWV-RSEGDAFLNGA 314
+ SQ N Y A A + + WV SE D F+ GA
Sbjct: 355 NPTIISQGNRYIAPPNLAA--KRITKQLGATEEEWKNWVWHSEEDLFMEGA 403
>Os05g0293500 Similar to Pectate lyase B (Fragment)
Length = 373
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 53 LAGAAEGFGRRAIGGLHGPLYRVTSLDDDGH----GTLRQACRAHGPLWIVFDVSGDIHL 108
LA A GFGRRA+GG G +Y V DD GTLR PLWIVF I
Sbjct: 60 LADCAVGFGRRAVGGKGGRVYVVNDTGDDAARPAPGTLRYGLVQDEPLWIVFAGDMTISP 119
Query: 109 RTYLRVTSHKTIDGRGQRV---------------RLLGKGLQLKECRHVIVCNLQIEGGR 153
L V+S KT+DGRG RV ++ GL ++ CR ++E G
Sbjct: 120 AHELVVSSRKTVDGRGARVVVGDGGACFAVRGASDVVIHGLTIRRCRPA----PKLEAGM 175
Query: 154 GHDVDAIQIKPSSADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDKTMLVGADP 213
D D + +S+D+W+D C++ C DGL+D+ GST VT+S HDK +L+G +
Sbjct: 176 S-DGDGVH---NSSDVWVDHCTVEACADGLIDVVVGSTRVTLSNNLLRNHDKAILLGHND 231
Query: 214 SHTGDRGIRVTV-HHCFFDGTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGVEAQVASQC 272
+T D+ ++VTV + F G QR PR RFG H+ NN W YA+ + S
Sbjct: 232 DYTDDKAMQVTVAFNRFGPGLVQRMPRCRFGLFHVINNDYIAWQKYAIGGSASPTIISHG 291
Query: 273 NVYEAGAERKAVFR--YVPXXXXXXXXXXXGWVRSEGDAFLNGA 314
N + A ++ R VP WV S+GD LNGA
Sbjct: 292 NRFYADMAKEVTKRDDDVP----ESVWHHWNWV-SDGDLMLNGA 330
>Os08g0286100
Length = 384
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 130/272 (47%), Gaps = 31/272 (11%)
Query: 73 YRVTSLDDDG----HGTLRQ-ACRAHGPLWIVFDVSGDIHLRTYLRVTSHKTIDGRGQRV 127
Y VT DD GTLR A +WI F I L L V + TIDGRG V
Sbjct: 69 YTVTDPSDDPVRPRPGTLRYGATVLPAKVWITFARDMRIRLAQPLYVKNFTTIDGRGADV 128
Query: 128 RLLG-KGLQLKECRHVIVCNLQIEGGRGH------------------DVDAIQIKPSSAD 168
+ G G+ L R VIV L + R D DAI++ SS
Sbjct: 129 HVAGGAGIVLYHARDVIVHGLHVHDCRAQPPGRVVVPGGAVQPSGSGDGDAIRLVASS-K 187
Query: 169 IWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDKTMLVGADPSHTGDRGIRVTV-HH 227
+WID +L+ C+DGL+D+T GSTDVTVS F HDK ML+G D T DR +RVTV +
Sbjct: 188 VWIDHNTLSRCEDGLLDVTVGSTDVTVSNNWFHDHDKVMLLGHDDGFTTDRRMRVTVAFN 247
Query: 228 CFFDGTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGVEAQVASQCNVYEA---GAERKAV 284
F QR PR+R G AH+ NN GW YA+ + V SQ N++ A + K V
Sbjct: 248 RFGPNVNQRMPRIRHGYAHVVNNLYDGWRDYAIGGSMGPSVKSQGNLFAASGGAGDNKKV 307
Query: 285 FRYVPXXXXXXXXXXXG-W-VRSEGDAFLNGA 314
R +P W + S GDAF NGA
Sbjct: 308 TRRMPAVARGGGGGGKDQWHLHSVGDAFENGA 339
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.140 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,814,867
Number of extensions: 577356
Number of successful extensions: 1214
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1183
Number of HSP's successfully gapped: 11
Length of query: 364
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 262
Effective length of database: 11,709,973
Effective search space: 3068012926
Effective search space used: 3068012926
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)