BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0264700 Os01g0264700|AK071712
(311 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0264700 Cellular retinaldehyde binding/alpha-tocophero... 651 0.0
Os02g0752000 Cellular retinaldehyde-binding/triple function... 300 8e-82
Os03g0724100 Cellular retinaldehyde binding/alpha-tocophero... 273 1e-73
Os05g0267800 Cellular retinaldehyde-binding/triple function... 256 1e-68
Os05g0267100 Cellular retinaldehyde-binding/triple function... 145 5e-35
Os01g0926800 Phosphatidylinositol transfer protein-like, N-... 107 2e-23
Os03g0850700 Similar to Phosphatidylinositol phosphatidylch... 98 9e-21
AK107322 97 1e-20
Os03g0219100 Phosphatidylinositol transfer protein-like, N-... 91 8e-19
Os02g0321500 Phosphatidylinositol transfer protein-like, N-... 71 9e-13
>Os01g0264700 Cellular retinaldehyde binding/alpha-tocopherol transport family
protein
Length = 311
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/311 (100%), Positives = 311/311 (100%)
Query: 1 MSFLFKSSNGATTEKNLTLEEQQEKINDLRKELGEHSSEEIQDFLSDASCLRFLRARNWN 60
MSFLFKSSNGATTEKNLTLEEQQEKINDLRKELGEHSSEEIQDFLSDASCLRFLRARNWN
Sbjct: 1 MSFLFKSSNGATTEKNLTLEEQQEKINDLRKELGEHSSEEIQDFLSDASCLRFLRARNWN 60
Query: 61 VQKASKMMKSAVKWRVSYMPQKINWDDVAHEAETGKIYRADYKDKHGRTVLVLRPGLENT 120
VQKASKMMKSAVKWRVSYMPQKINWDDVAHEAETGKIYRADYKDKHGRTVLVLRPGLENT
Sbjct: 61 VQKASKMMKSAVKWRVSYMPQKINWDDVAHEAETGKIYRADYKDKHGRTVLVLRPGLENT 120
Query: 121 TSGKGQIKYLVYCLEKAIMSLTEDQEKMVWLTDFQSWTLGSTPLKVTRETVNVLQDCYPE 180
TSGKGQIKYLVYCLEKAIMSLTEDQEKMVWLTDFQSWTLGSTPLKVTRETVNVLQDCYPE
Sbjct: 121 TSGKGQIKYLVYCLEKAIMSLTEDQEKMVWLTDFQSWTLGSTPLKVTRETVNVLQDCYPE 180
Query: 181 RLGLAILYNPPRIFESFWKIVKPFLDHETYKKVKFVYSSDKESQKIMADVFDLDKLDSAF 240
RLGLAILYNPPRIFESFWKIVKPFLDHETYKKVKFVYSSDKESQKIMADVFDLDKLDSAF
Sbjct: 181 RLGLAILYNPPRIFESFWKIVKPFLDHETYKKVKFVYSSDKESQKIMADVFDLDKLDSAF 240
Query: 241 GGRNPATFEYNSYAERMRADDIKMGSSFKSNGITLPQDHSHVSADKEANGGGSDASSEAS 300
GGRNPATFEYNSYAERMRADDIKMGSSFKSNGITLPQDHSHVSADKEANGGGSDASSEAS
Sbjct: 241 GGRNPATFEYNSYAERMRADDIKMGSSFKSNGITLPQDHSHVSADKEANGGGSDASSEAS 300
Query: 301 FYSGTDSPLRA 311
FYSGTDSPLRA
Sbjct: 301 FYSGTDSPLRA 311
>Os02g0752000 Cellular retinaldehyde-binding/triple function, N-terminal domain
containing protein
Length = 378
Score = 300 bits (768), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 143/264 (54%), Positives = 188/264 (71%), Gaps = 2/264 (0%)
Query: 1 MSFLFKSSNGATTEKNLTLEEQQEKINDLRKELGEHSSEEIQDFLSDASCLRFLRARNWN 60
MS +NG E L E++ KI ++R LG+ S + + SDAS R+L ARNW
Sbjct: 1 MSSASGVNNGDGKEAAL-FEQRLSKIGEVRAALGQLSGKAAL-YCSDASIARYLVARNWE 58
Query: 61 VQKASKMMKSAVKWRVSYMPQKINWDDVAHEAETGKIYRADYKDKHGRTVLVLRPGLENT 120
V+KA+KM+K +KWR Y P +I WD++A+EA TGKIYR DY DK GR++LV+RPG++NT
Sbjct: 59 VKKATKMLKKTLKWRSEYKPDEIRWDEIANEAATGKIYRTDYFDKSGRSILVMRPGVQNT 118
Query: 121 TSGKGQIKYLVYCLEKAIMSLTEDQEKMVWLTDFQSWTLGSTPLKVTRETVNVLQDCYPE 180
KGQI+YLVYC+E AI++L DQ +MVWL DF ++L + L VT+ T +VLQ YPE
Sbjct: 119 KKAKGQIRYLVYCMENAILNLPHDQSQMVWLIDFAGFSLSNISLHVTKLTADVLQGHYPE 178
Query: 181 RLGLAILYNPPRIFESFWKIVKPFLDHETYKKVKFVYSSDKESQKIMADVFDLDKLDSAF 240
RLG+AILYN P+ FESFWKI P L+ +T+ KVKFVY E+ KIM D+F++++L+SAF
Sbjct: 179 RLGVAILYNAPKFFESFWKIASPILEPKTFNKVKFVYPDRPETNKIMEDLFNMEELESAF 238
Query: 241 GGRNPATFEYNSYAERMRADDIKM 264
GG+N ATF N YA RMR DDIKM
Sbjct: 239 GGKNQATFNINDYAARMREDDIKM 262
>Os03g0724100 Cellular retinaldehyde binding/alpha-tocopherol transport family
protein
Length = 299
Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 127/262 (48%), Positives = 184/262 (70%), Gaps = 5/262 (1%)
Query: 19 LEEQQEKINDLRKELGEHSSEEIQDFLSDASCLRFLRARNWNVQKASKMMKSAVKWRVSY 78
+E+Q+ KI +LR LG SS + + ++A R+L ARNWNV K+ KM++ ++KWR +Y
Sbjct: 17 IEQQEAKIQELRAALGPLSSSG-KKYCTEACLRRYLEARNWNVDKSRKMLEESLKWRTAY 75
Query: 79 MPQKINWDDVAHEAETGKIYRADYKDKHGRTVLVLRPGLENTTSGKGQIKYLVYCLEKAI 138
P+ I W +++ E+ETGK+YRA + D+ GRTV+++RP +NT+S +GQ+++LVY LE AI
Sbjct: 76 RPEDIRWPEISVESETGKMYRASFVDREGRTVVIMRPAKQNTSSHEGQVRFLVYTLENAI 135
Query: 139 MSLTEDQEKMVWLTDFQSWTLG-STPLKVTRETVNVLQDCYPERLGLAILYNPPRIFESF 197
+SL EDQEKMVWL DF WTL +TP+K RE N+LQ+ YPERL + IL+NPP++FE+F
Sbjct: 136 LSLPEDQEKMVWLIDFTGWTLANATPIKTARECANILQNHYPERLAIGILFNPPKVFEAF 195
Query: 198 WKIVKPFLDHETYKKVKFVYSSDKESQKIMADVFDLDKLDSAFGGRNPATFEYNSYAERM 257
WK+VK FLD ++ +KV FVY ++ES KI+ D + L FGG+N + + Y++ M
Sbjct: 196 WKVVKHFLDPKSIQKVNFVYLKNEESMKILHKYIDPEVLPVEFGGKNNVVYSHEEYSKLM 255
Query: 258 RADDIKMGSSFKSNGITLPQDH 279
DDIKM S + S+ T DH
Sbjct: 256 VKDDIKMASFWASDTKT---DH 274
>Os05g0267800 Cellular retinaldehyde-binding/triple function, N-terminal domain
containing protein
Length = 283
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 181/276 (65%), Gaps = 4/276 (1%)
Query: 1 MSFLFKSSNGATTEKNLTL--EEQQEKINDLRKELGEHSSEEIQDFLSDASCLRFLRARN 58
MS L K+ + EK +EQ +KI +R+ LG + E+ FLSDA+ RFLRARN
Sbjct: 1 MSNLLKAKSWVPEEKAAATASDEQNDKIKKVRELLGSQMTAEMPSFLSDATIRRFLRARN 60
Query: 59 WNVQKASKMMKSAVKWRVSYMPQKINWDDV-AHEAETGKIYRADYKDKHGRTVLVLRPGL 117
W+ ++A+K +K VKWR Y P I W+D+ E E + Y ADY DK+GR V + P +
Sbjct: 61 WSTEQATKALKETVKWRRQYRPDTIRWEDIPGREHEARRTYIADYFDKNGRIVFISNPTI 120
Query: 118 ENTTSGKGQIKYLVYCLEK-AIMSLTEDQEKMVWLTDFQSWTLGSTPLKVTRETVNVLQD 176
++ +S K QIK LVY LE A+ S + E VWLTDFQ W L +TPL + RE +++Q+
Sbjct: 121 KSKSSTKDQIKQLVYNLEIFAMHSENMEDECTVWLTDFQGWVLTNTPLPLLRECTHIIQN 180
Query: 177 CYPERLGLAILYNPPRIFESFWKIVKPFLDHETYKKVKFVYSSDKESQKIMADVFDLDKL 236
YP + +AIL NPPRIFESFWKIV F++ + +KVKFVY+++ ES KI+AD+FDLDKL
Sbjct: 181 HYPGLISVAILSNPPRIFESFWKIVCYFIEPKLKEKVKFVYTNNPESHKIVADMFDLDKL 240
Query: 237 DSAFGGRNPATFEYNSYAERMRADDIKMGSSFKSNG 272
+SAFGGRN F+ + YAERM+ D G+ +NG
Sbjct: 241 ESAFGGRNTLPFDMDKYAERMKRSDQMRGAPMHANG 276
>Os05g0267100 Cellular retinaldehyde-binding/triple function, C-terminal domain
containing protein
Length = 143
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 96/137 (70%)
Query: 143 EDQEKMVWLTDFQSWTLGSTPLKVTRETVNVLQDCYPERLGLAILYNPPRIFESFWKIVK 202
E +E + WL D + W++ STPL +RE+++++Q+ YP + +AIL N PRIFESFWKI+K
Sbjct: 6 EQEEHVTWLIDLRGWSISSTPLSTSRESMHIVQNYYPGIIAVAILSNTPRIFESFWKIIK 65
Query: 203 PFLDHETYKKVKFVYSSDKESQKIMADVFDLDKLDSAFGGRNPATFEYNSYAERMRADDI 262
FL+ + +KVKF+Y+++ ES KI++++FD+D L++AFGGRN T + ++YAERMR D+
Sbjct: 66 HFLEAKMSEKVKFLYTNNPESHKIVSEMFDMDLLETAFGGRNSITIDIDNYAERMRRSDL 125
Query: 263 KMGSSFKSNGITLPQDH 279
G I L H
Sbjct: 126 ARGVLIIQTDINLISRH 142
>Os01g0926800 Phosphatidylinositol transfer protein-like, N-terminal domain
containing protein
Length = 247
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 9/206 (4%)
Query: 52 RFLRARNWNVQKASKMMKSAVKWRVSYMPQ-KINWDDVAHEAETGKIYRADYKDKHGRTV 110
RFLRAR+ NV+KAS M+ A++WR +P + + V + + K+Y D+ GR +
Sbjct: 41 RFLRARDHNVEKASAMLLKALRWRREAVPGGSVPEEKVQSDLDDDKVYMGG-ADRTGRPI 99
Query: 111 LVLRPGLENTTSGKGQIK---YLVYCLEKAIMSLTEDQEKMVWLTDFQSWTLGSTPLKVT 167
L+ P ++ ++ + K Y VY L+ + QEK V + D + W + ++
Sbjct: 100 LLAFPA-KHFSAKRDMPKFKSYCVYLLDSICARIPRGQEKFVCIVDLKGWGYSNCDIRAY 158
Query: 168 RETVNVLQDCYPERLGLAILYNPPRIFESFWKIVKPFLDHETYKKVKFVYSSDKESQKIM 227
+ ++Q+ YPERLG A++ + P +F WK++ PF+D+ T + KFV+ DK Q+++
Sbjct: 159 IAAIEIMQNYYPERLGKALMIHVPYMFMKAWKMIYPFIDNVT--RDKFVFVDDKSLQEVL 216
Query: 228 ADVFDLDKLDSAFGGR-NPATFEYNS 252
D ++ GG+ P + + N+
Sbjct: 217 HQEIDDSQIPDTLGGKLAPVSLKNNA 242
>Os03g0850700 Similar to Phosphatidylinositol phosphatidylcholine transfer
protein sec14 cytosolic-like protein
Length = 261
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 12/205 (5%)
Query: 47 DASCLRFLRARNWNVQKASKMMKSAVKWRVSYMP--QKINWDDVAHEAETGKIYRADYKD 104
D RFLRAR+ N+ KAS M+ ++W+ P + I ++V E K+Y Y D
Sbjct: 43 DYQLRRFLRARDHNIGKASAMLVKYLQWKREVKPGGRAIADEEVRGELAQEKLYMQGY-D 101
Query: 105 KHGRTVLVLRPGLENTTSGKGQ---IKYLVYCLEKAIMSLTED--QEKMVWLTDFQSWTL 159
+ GR LV G + + + +Y+VY L++ L + QEK + D Q W
Sbjct: 102 RQGRP-LVYGFGARHFPARRDLDEFKRYVVYVLDRTCARLGGNGGQEKFAAVADLQGWGY 160
Query: 160 -GSTPLKVTRETVNVLQDCYPERLGLAILYNPPRIFESFWKIVKPFLDHETYKKVKFVYS 218
G+ ++ + ++Q+ YPERLG L + P +F + WKI+ PF+D T K KFV+
Sbjct: 161 YGNCDIRAYVAALEIMQNYYPERLGRVFLIHVPYVFMAAWKIIYPFIDDNT--KKKFVFV 218
Query: 219 SDKESQKIMADVFDLDKLDSAFGGR 243
+DK+ + D D L +GG+
Sbjct: 219 ADKDLHATLRDAIDDSNLAEDYGGK 243
>AK107322
Length = 405
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 44 FLSDASCLRFLRARNWNVQKASKMMKSAVKWRVSYMPQKINWDDVAHEAETGKIYRADYK 103
+L+ LR+LRA W A + ++S + WR Y +D ++ E E+GK Y
Sbjct: 131 WLTRECLLRYLRATKWVTANALRRLQSTLSWRREYGADTFTYDYISPENESGKQVILGY- 189
Query: 104 DKHGRTVLVLRPGLENTTSGKGQIKYLVYCLEKAIMSLTEDQEKMVWLTDFQSWTLGSTP 163
D R L L PG +NT QI +L + L++ I QE L DF+ G+ P
Sbjct: 190 DNEARPCLFLSPGKQNTKMSDRQIHHLCFMLDRVIDMTPPGQETTALLIDFKGAAKGAVP 249
Query: 164 -LKVTRETVNVLQDCYPERLGLAILYNPPRIFESFWKIVKPFLDHETYKKVKF 215
++ R +N+LQ+ PERLG A++ P F+K++ F+D T K+KF
Sbjct: 250 SVEQARAVLNILQNHNPERLGRALITQMPWYVSIFFKLISSFIDPVTKDKMKF 302
>Os03g0219100 Phosphatidylinositol transfer protein-like, N-terminal domain
containing protein
Length = 438
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 11/193 (5%)
Query: 21 EQQEKINDLRKELGEHSSEEIQD--FLSDASCLRFLRARNWNVQKASKMMKSAVKWRVSY 78
+++EKI +RK L + + + + +DA RFLRAR +V+KA+K +++ + WR +
Sbjct: 9 KEREKIEAVRKTLRKQAPLTAKQAMYCNDACVERFLRARGESVKKAAKHLRTVLSWRDTI 68
Query: 79 MPQKINWDDVAHEAETGKIYRADYKDKHGRTVLVLR-----PGLENTTSGKGQIKYLVYC 133
I D+ + E G Y A + D+ R V+V R P S K ++ LV+
Sbjct: 69 GADHIIADEFSAELADGVAYVAGHDDE-ARPVVVFRIKQDYPKFH---SQKSFVRLLVFT 124
Query: 134 LEKAIMSLTEDQEKMVWLTDFQSWTLGSTPLKVTRETVNVLQDCYPERLGLAILYNPPRI 193
LE A+ ++ ++ V L D + S L + T+ ++ D YP RL A + +PP +
Sbjct: 125 LEVAVSCMSRFVDQFVLLFDASFFRSASAFLNLLMGTLKIVADYYPGRLHRAFVIDPPSL 184
Query: 194 FESFWKIVKPFLD 206
F WK V+PF++
Sbjct: 185 FSVLWKGVRPFVE 197
>Os02g0321500 Phosphatidylinositol transfer protein-like, N-terminal domain
containing protein
Length = 261
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 51 LRFLRARNWNVQKASKMMKSAVKWRVSYMPQKINWDDVAHEAETGKIYRADYKDKHGRTV 110
L FL+ R +V + + A+KWR + +++ + V +TGK Y D D +GR V
Sbjct: 74 LWFLKDRKLSVDETVSKLTKAIKWRQDFQVSELSEESVKGLYQTGKAYVHDSFDIYGRPV 133
Query: 111 LVLR-----PGLENTTSGKGQIKYLVYCLEKAIMSLTEDQEKMVWLTDFQSWTLGSTPLK 165
LV+ P ++ + +LV EKA+ L E ++ + D + + + + L+
Sbjct: 134 LVVVASKHFPSKQDPVENEKLCAFLV---EKALSRLPLGTENILGIFDLRGFQVENGDLQ 190
Query: 166 VTRETVNVLQDCYPERLGLAILYNPPRIFESFWKIVKPFL 205
+ ++V YP+RLG + + P +F+ W++VKP L
Sbjct: 191 FLKFLIDVFYYYYPKRLGQVLFVDAPFVFQPMWQLVKPLL 230
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.130 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,665,159
Number of extensions: 426461
Number of successful extensions: 1528
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1517
Number of HSP's successfully gapped: 10
Length of query: 311
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 210
Effective length of database: 11,762,187
Effective search space: 2470059270
Effective search space used: 2470059270
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 156 (64.7 bits)