BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0174500 Os01g0174500|AK070484
(303 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0174500 Prolyl 4-hydroxylase, alpha subunit domain con... 625 e-180
Os10g0413500 Prolyl 4-hydroxylase, alpha subunit domain con... 245 4e-65
Os03g0803500 Similar to Prolyl 4-hydroxylase alpha-1 subuni... 239 2e-63
Os07g0194500 Prolyl 4-hydroxylase, alpha subunit domain con... 231 4e-61
Os05g0489100 Similar to Prolyl 4-hydroxylase alpha subunit-... 211 4e-55
Os10g0415128 Prolyl 4-hydroxylase, alpha subunit domain con... 201 7e-52
Os03g0166100 147 7e-36
Os10g0497800 Similar to Prolyl 4-hydroxylase, alpha subunit... 141 7e-34
Os04g0346000 Prolyl 4-hydroxylase, alpha subunit domain con... 126 2e-29
Os03g0166200 Similar to Prolyl 4-hydroxylase alpha-1 subuni... 111 8e-25
Os03g0761900 Similar to Prolyl 4-hydroxylase 102 5e-22
>Os01g0174500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 303
Score = 625 bits (1613), Expect = e-180, Method: Compositional matrix adjust.
Identities = 303/303 (100%), Positives = 303/303 (100%)
Query: 1 MGSGIGAVLVLVAAWLTFAPPGALASSRRFDLSIAQEKLVNSTGGSTASSSHLVFDPSKS 60
MGSGIGAVLVLVAAWLTFAPPGALASSRRFDLSIAQEKLVNSTGGSTASSSHLVFDPSKS
Sbjct: 1 MGSGIGAVLVLVAAWLTFAPPGALASSRRFDLSIAQEKLVNSTGGSTASSSHLVFDPSKS 60
Query: 61 KRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGDRNSSYNNIEDIVVSKIED 120
KRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGDRNSSYNNIEDIVVSKIED
Sbjct: 61 KRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGDRNSSYNNIEDIVVSKIED 120
Query: 121 RISLWSFLPKENGESIQVLKYGVNRSGSIKEEPKSSSGAHRLATILMYLSDVKQGGETVF 180
RISLWSFLPKENGESIQVLKYGVNRSGSIKEEPKSSSGAHRLATILMYLSDVKQGGETVF
Sbjct: 121 RISLWSFLPKENGESIQVLKYGVNRSGSIKEEPKSSSGAHRLATILMYLSDVKQGGETVF 180
Query: 181 PRSEMKDAQAKEGAPSQCSGYAVRPAKGNAILLFNLRPDGETDKDSQYEECPVLEGEKWL 240
PRSEMKDAQAKEGAPSQCSGYAVRPAKGNAILLFNLRPDGETDKDSQYEECPVLEGEKWL
Sbjct: 181 PRSEMKDAQAKEGAPSQCSGYAVRPAKGNAILLFNLRPDGETDKDSQYEECPVLEGEKWL 240
Query: 241 AIKHINLRKFDYPKSSLASEDECTDEDDRCVSWAASGECDRNPVFMIGSSDYYGSCRKSC 300
AIKHINLRKFDYPKSSLASEDECTDEDDRCVSWAASGECDRNPVFMIGSSDYYGSCRKSC
Sbjct: 241 AIKHINLRKFDYPKSSLASEDECTDEDDRCVSWAASGECDRNPVFMIGSSDYYGSCRKSC 300
Query: 301 RVC 303
RVC
Sbjct: 301 RVC 303
>Os10g0413500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 308
Score = 245 bits (625), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 173/271 (63%), Gaps = 26/271 (9%)
Query: 55 FDPSKSKRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGDRNSSYNNI---- 110
FDPS+ +LSW PR FL++GFL+D EC+HL+S+ + +E S+ + S + +
Sbjct: 40 FDPSRVVQLSWRPRAFLHKGFLTDAECEHLISLAKDKLEKSMVADNESGKSVMSEVRTSS 99
Query: 111 -------EDIVVSKIEDRISLWSFLPKENGESIQVLKYGVNRSGSIKEEP---------K 154
+D VV++IE+RI+ W+FLP +NGESIQ+L Y ++G K EP
Sbjct: 100 GMFLEKKQDEVVARIEERIAAWTFLPPDNGESIQILHY---QNGE-KYEPHYDYFHDKNN 155
Query: 155 SSSGAHRLATILMYLSDVKQGGETVFPRSEMKDAQAKEGAPSQCS--GYAVRPAKGNAIL 212
+ G HR+AT+LMYLSDV +GGET+FP +E K Q K+ S C+ GYAV+P KG+A+L
Sbjct: 156 QALGGHRIATVLMYLSDVGKGGETIFPEAEGKLLQPKDDTWSDCAKNGYAVKPVKGDALL 215
Query: 213 LFNLRPDGETDKDSQYEECPVLEGEKWLAIKHINLRKFDYPKSSLASEDECTDEDDRCVS 272
F+L PD TD DS + CPV+EG+KW A K I++R FD AS D C DE+ C
Sbjct: 216 FFSLHPDATTDSDSLHGSCPVIEGQKWSATKWIHVRSFDISVKQGASTDGCEDENVLCPQ 275
Query: 273 WAASGECDRNPVFMIGSSDYYGSCRKSCRVC 303
WAA GEC +NP +M+G+++ G CRKSC VC
Sbjct: 276 WAAVGECAKNPNYMVGTNEAPGFCRKSCNVC 306
>Os03g0803500 Similar to Prolyl 4-hydroxylase alpha-1 subunit-like protein
Length = 299
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 167/267 (62%), Gaps = 19/267 (7%)
Query: 55 FDPSKSKRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGDRNSSYNNI---- 110
+DP++ +LSW PR FLY GFLS ECDHLV++ +G ME S+ + S + +
Sbjct: 32 YDPARVTQLSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVADNDSGKSIMSQVRTSS 91
Query: 111 -------EDIVVSKIEDRISLWSFLPKENGESIQVLKYGVNRS-----GSIKEEPKSSSG 158
ED +VS IE R++ W+FLP+EN ESIQ+L Y + + ++ G
Sbjct: 92 GTFLSKHEDDIVSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDYFHDKNNLKRG 151
Query: 159 AHRLATILMYLSDVKQGGETVFPRSEMKDAQAKEGAPSQC--SGYAVRPAKGNAILLFNL 216
HR+AT+LMYL+DVK+GGETVFP + + Q K+ S C SG AV+P KG+A+L F+L
Sbjct: 152 GHRVATVLMYLTDVKKGGETVFPNAAGRHLQLKDETWSDCARSGLAVKPKKGDALLFFSL 211
Query: 217 RPDGETDKDSQYEECPVLEGEKWLAIKHINLRKFDYPKSSLASEDECTDEDDRCVSWAAS 276
+ TD S + CPV+EGEKW A K I++R FD P ++ + C+DE++RC WAA
Sbjct: 212 HVNATTDPASLHGSCPVIEGEKWSATKWIHVRSFDNP-PDVSLDLPCSDENERCTRWAAV 270
Query: 277 GECDRNPVFMIGSSDYYGSCRKSCRVC 303
GEC RNP +M+G+ D G CRKSC VC
Sbjct: 271 GECYRNPKYMVGTKDSLGFCRKSCGVC 297
>Os07g0194500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 319
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 172/277 (62%), Gaps = 19/277 (6%)
Query: 45 GSTASSSHLVFDPSKSKRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGDRN 104
G A ++ F+ S+ + +SW PR+F+Y+GFLSD ECDHLV +G+ M+ S+ +
Sbjct: 42 GVGAVAAAPPFNASRVRAVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGK 101
Query: 105 SSYNNI-----------EDIVVSKIEDRISLWSFLPKENGESIQVLKYGVNRS-----GS 148
S + + +D VVS+IE RI+ W+FLP+EN E+IQ+L+Y +
Sbjct: 102 SVMSEVRTSSGMFLDKRQDPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDY 161
Query: 149 IKEEPKSSSGAHRLATILMYLSDVKQGGETVFPRSEMKDAQAKEGAPSQCS--GYAVRPA 206
++ + G HR AT+LMYLS V++GGETVFP +E + Q K+ S+C+ G AV+P
Sbjct: 162 FHDKVNQALGGHRYATVLMYLSTVEKGGETVFPNAEGWENQPKDDTFSECAQKGLAVKPV 221
Query: 207 KGNAILLFNLRPDGETDKDSQYEECPVLEGEKWLAIKHINLRKFDYPKSSLASEDECTDE 266
KG+ +L F+L DG D S + CPV+EGEKW A K I +R +++P S +E C+D
Sbjct: 222 KGDTVLFFSLHIDGVPDPLSLHGSCPVIEGEKWSAPKWIRIRSYEHPPVSKVTEG-CSDN 280
Query: 267 DDRCVSWAASGECDRNPVFMIGSSDYYGSCRKSCRVC 303
RC WA +GEC++NPV+M+G+ G+CRKSC VC
Sbjct: 281 SARCAKWAEAGECEKNPVYMVGAEGLPGNCRKSCGVC 317
>Os05g0489100 Similar to Prolyl 4-hydroxylase alpha subunit-like protein
Length = 319
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 161/272 (59%), Gaps = 26/272 (9%)
Query: 54 VFDPSKSKRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDG---------DRN 104
V P S+++SW PR+FLY+ FLSD E +HLVS+ R ++ S A D R
Sbjct: 52 VVYPHHSRQISWKPRVFLYQHFLSDDEANHLVSLARTELKRS-AVADNLSGKSELSDART 110
Query: 105 SSYNNI---EDIVVSKIEDRISLWSFLPKENGESIQVLKYGVNRS-----GSIKEEPKSS 156
SS I +D +V+ IE++I+ W+FLPKENGE IQVL+Y + +
Sbjct: 111 SSGTFIRKSQDPIVAGIEEKIAAWTFLPKENGEDIQVLRYKHGEKYERHYDYFSDNVNTL 170
Query: 157 SGAHRLATILMYLSDVKQGGETVFPRSEM---KDAQAKEGAPSQCS--GYAVRPAKGNAI 211
G HR+AT+LMYL+DV +GGETVFP +E ++ S+C+ G AV+P KG+A+
Sbjct: 171 RGGHRIATVLMYLTDVAEGGETVFPLAEEFTESGTNNEDSTLSECAKKGVAVKPRKGDAL 230
Query: 212 LLFNLRPDGETDKDSQYEECPVLEGEKWLAIKHINLRKFDYPKSSLASEDECTDEDDRCV 271
L FNL PD D S + CPV++GEKW A K I + FD ++ CTD+++ C
Sbjct: 231 LFFNLSPDASKDSLSLHAGCPVIKGEKWSATKWIRVASFD---KVYHTQGNCTDDNESCE 287
Query: 272 SWAASGECDRNPVFMIGSSDYYGSCRKSCRVC 303
WAA GEC +NP +MIG++ G CRKSC +C
Sbjct: 288 KWAALGECIKNPEYMIGTAALPGYCRKSCNIC 319
>Os10g0415128 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 241
Score = 201 bits (510), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 136/204 (66%), Gaps = 15/204 (7%)
Query: 111 EDIVVSKIEDRISLWSFLPKENGESIQVLKYGVNRSGSIKEEP---------KSSSGAHR 161
+D VV++IE+RI+ W+FLP +NGESIQ+L Y ++G K EP + G HR
Sbjct: 27 QDEVVARIEERIAAWTFLPPDNGESIQILHY---QNGE-KYEPHYDYFHDKNNQALGGHR 82
Query: 162 LATILMYLSDVKQGGETVFPRSEMKDAQAKEGAPSQCS--GYAVRPAKGNAILLFNLRPD 219
+AT+LMYLSDV +GGET+FP +E K Q K+ S C+ GYAV+P KG+A+L F+L PD
Sbjct: 83 IATVLMYLSDVGKGGETIFPEAEGKLLQPKDDTWSDCAKNGYAVKPVKGDALLFFSLHPD 142
Query: 220 GETDKDSQYEECPVLEGEKWLAIKHINLRKFDYPKSSLASEDECTDEDDRCVSWAASGEC 279
TD DS + CPV+EG+KW A K I++R FD AS D C DE+ C WAA GEC
Sbjct: 143 ATTDSDSLHGSCPVIEGQKWSATKWIHVRSFDISVKQGASTDGCEDENVLCPQWAAVGEC 202
Query: 280 DRNPVFMIGSSDYYGSCRKSCRVC 303
+NP +M+G+++ G CRKSC VC
Sbjct: 203 AKNPNYMVGTNEAPGFCRKSCNVC 226
>Os03g0166100
Length = 277
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 130/225 (57%), Gaps = 49/225 (21%)
Query: 55 FDPSKSKRLSWHPRIFLYEGFLSDMECDHLVSMGR-GNMESSLAFTDGD---------RN 104
FD S++ +SW PR FLYEGFLSD ECDHL+S+ + G ME S DG+ R
Sbjct: 37 FDASRAVDVSWRPRAFLYEGFLSDAECDHLISLAKQGKMEKS-TVVDGESGESVTSKVRT 95
Query: 105 SS---YNNIEDIVVSKIEDRISLWSFLPK-----------------ENGESIQVLKYGVN 144
SS + +D VV++IE+RI+ W+ LP ENGES+Q+L+YG
Sbjct: 96 SSGMFLDKKQDEVVARIEERIAAWTMLPTECIIFYCFANFAILKLSENGESMQILRYGQG 155
Query: 145 RSGSIKEEPK---------SSSGAHRLATILMYLSDVKQGGETVFPRSEMKDAQAKEGAP 195
K EP S+ R+AT+LMYLS+VK G+++ P++ + +Q K+
Sbjct: 156 E----KYEPHFDYISGRQGSTREGDRVATVLMYLSNVKM-GDSLLPQARL--SQPKDETW 208
Query: 196 SQCS--GYAVRPAKGNAILLFNLRPDGETDKDSQYEECPVLEGEK 238
S C+ G+AV+PAKG+A+L F+L P+ D DS + CPV+EGEK
Sbjct: 209 SDCAEQGFAVKPAKGSAVLFFSLHPNATLDTDSLHGSCPVIEGEK 253
>Os10g0497800 Similar to Prolyl 4-hydroxylase, alpha subunit-like protein
Length = 321
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 123/207 (59%), Gaps = 19/207 (9%)
Query: 63 LSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSL---AFTDGDRNSSYNNI--------E 111
LSW PR FLY FLS EC++L+S+ + +M+ S A T G ++S +
Sbjct: 113 LSWEPRAFLYHNFLSKEECEYLISLAKPHMKKSTVVDASTGGSKDSRVRTSSGMFLGRGQ 172
Query: 112 DIVVSKIEDRISLWSFLPKENGESIQVLKYGVNRSGS-----IKEEPKSSSGAHRLATIL 166
D ++ IE RIS ++F+P ENGE +QVL Y V + +E + +G R+AT+L
Sbjct: 173 DKIIRTIEKRISDYTFIPVENGEGLQVLHYEVGQKYEPHFDYFHDEFNTKNGGQRIATLL 232
Query: 167 MYLSDVKQGGETVFPRSEMKDAQAK-EGAPSQCS--GYAVRPAKGNAILLFNLRPDGETD 223
MYLSDV++GGET+FP S+ + + S+C+ G AV+P G+A+L +++RPDG D
Sbjct: 233 MYLSDVEEGGETIFPSSKANSSSSPFYNELSECAKKGLAVKPKMGDALLFWSMRPDGSLD 292
Query: 224 KDSQYEECPVLEGEKWLAIKHINLRKF 250
S + CPV++G KW + K + + ++
Sbjct: 293 ATSLHGGCPVIKGNKWSSTKWMRVHEY 319
>Os04g0346000 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 267
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 115/210 (54%), Gaps = 21/210 (10%)
Query: 59 KSKRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGDRNSSYNNIEDI----- 113
K + +SW PRI ++ FLS ECD+L S+ R ++ S +N+
Sbjct: 60 KPEVISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVVDVATGKGVKSNVRTSSGMFV 119
Query: 114 --------VVSKIEDRISLWSFLPKENGESIQVLKYGVNRSGSIKEEPKSSS-----GAH 160
V+ IE RIS++S +P+ENGE IQVL+Y ++ + S + G
Sbjct: 120 SSEERKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFNIKRGGQ 179
Query: 161 RLATILMYLSDVKQGGETVFPRSEMKDAQAKEGAPSQCSGYAVRPAKGNAILLFNLRPDG 220
R+AT+LMYL+D +GGET FP++ D + G G V+P KG+A+L +++ DG
Sbjct: 180 RVATMLMYLTDGVEGGETHFPQA--GDGECSCGG-KMVKGLCVKPNKGDAVLFWSMGLDG 236
Query: 221 ETDKDSQYEECPVLEGEKWLAIKHINLRKF 250
ETD +S + CPVLEGEKW A K + ++F
Sbjct: 237 ETDSNSIHGGCPVLEGEKWSATKWMRQKEF 266
>Os03g0166200 Similar to Prolyl 4-hydroxylase alpha-1 subunit-like protein
Length = 135
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Query: 184 EMKDAQAKEGAPSQCS--GYAVRPAKGNAILLFNLRPDGETDKDSQYEECPVLEGEKWLA 241
+ + +Q K+ S C+ G+AV+P KG+A+L F+L P+ D S + CPV++GEKW A
Sbjct: 14 QARLSQPKDETWSDCAEQGFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQGEKWSA 73
Query: 242 IKHINLRKFDYPKSSLASEDECTDEDDRCVSWAASGECDRNPVFMIGSSDYYGSCRKSCR 301
K I++R +D ++ S D+C D+ C SWAA+GEC +NP +M+G+S+ G CRKSC
Sbjct: 74 TKWIHVRSYD--ENGRRSSDKCEDQHALCSSWAAAGECAKNPGYMVGTSESPGFCRKSCN 131
Query: 302 VC 303
VC
Sbjct: 132 VC 133
>Os03g0761900 Similar to Prolyl 4-hydroxylase
Length = 310
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 63 LSWHPRIFLYEGFLSDMECDHLVSMGRGN-MESSLAFTDGDRNSSYNNI----------- 110
LSW PR + F + +C+++V + M S+LA G+ S I
Sbjct: 103 LSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLALRKGETEESTKGIRTSSGTFLSSD 162
Query: 111 EDIV--VSKIEDRISLWSFLPKENGESIQVLKYGVNRS-----GSIKEEPKSSSGAHRLA 163
ED ++++E +I+ + +P+ +GE +L+Y + + + + R+A
Sbjct: 163 EDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYASHYDAFDPAQYGPQKSQRVA 222
Query: 164 TILMYLSDVKQGGETVFPRSEMKDAQAKEGAPSQCSGYAVRPAKGNAILLFNLRPDGETD 223
+ L+YL+DV++GGET+FP ++ +C G V+P KG+ +L ++L +G D
Sbjct: 223 SFLLYLTDVEEGGETMFPYENGENMDIGYDY-EKCIGLKVKPRKGDGLLFYSLMVNGTID 281
Query: 224 KDSQYEECPVLEGEKWLAIKHIN 246
S + CPV++GEKW+A K I
Sbjct: 282 PTSLHGSCPVIKGEKWVATKWIR 304
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.132 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,603,295
Number of extensions: 497040
Number of successful extensions: 1128
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1098
Number of HSP's successfully gapped: 11
Length of query: 303
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 203
Effective length of database: 11,814,401
Effective search space: 2398323403
Effective search space used: 2398323403
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 156 (64.7 bits)