BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0168100 Os01g0168100|AK121992
(593 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0168100 t-snare domain containing protein 961 0.0
Os05g0168800 Prefoldin domain containing protein 447 e-125
Os01g0167900 KIP1-like domain containing protein 239 5e-63
Os03g0161100 KIP1-like domain containing protein 132 8e-31
Os07g0695400 KIP1-like domain containing protein 114 1e-25
Os01g0976500 t-snare domain containing protein 113 4e-25
Os05g0466200 KIP1-like domain containing protein 111 2e-24
Os07g0666600 KIP1-like domain containing protein 89 1e-17
Os01g0835800 Prefoldin domain containing protein 82 1e-15
Os05g0119400 79 6e-15
>Os01g0168100 t-snare domain containing protein
Length = 593
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/593 (82%), Positives = 487/593 (82%)
Query: 1 MKRMQRMPTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEM 60
MKRMQRMPTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEM
Sbjct: 1 MKRMQRMPTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEM 60
Query: 61 YFERRPLLVTHVENFYRMYRALAERYDNVTGELRKNIPXXXXXXXXXXXXXXXXXXXXAP 120
YFERRPLLVTHVENFYRMYRALAERYDNVTGELRKNIP AP
Sbjct: 61 YFERRPLLVTHVENFYRMYRALAERYDNVTGELRKNIPSSLQSQGSLSISESDSETQSAP 120
Query: 121 PTPKPDSEETTPKQKRKPRAAGFDVFLXXXXXXXXXXXXXXXXXXXXXXXXXXVDELRED 180
PTPKPDSEETTPKQKRKPRAAGFDVFL VDELRED
Sbjct: 121 PTPKPDSEETTPKQKRKPRAAGFDVFLGSGGSSDISKKGSDGSSSSSSESDSEVDELRED 180
Query: 181 NGDGSPFALNERIAELEDXXXXXXXXXXXXXXXNTRCQCEKLEEKLKDSHSEISSLQKEL 240
NGDGSPFALNERIAELED NTRCQCEKLEEKLKDSHSEISSLQKEL
Sbjct: 181 NGDGSPFALNERIAELEDELQEAREKLEALEEKNTRCQCEKLEEKLKDSHSEISSLQKEL 240
Query: 241 EGQLAHHDHEIEKCKKELEHVHEKYSHDKSTLETEIIKLQDIVKNFEGDLAKMSQEKLQL 300
EGQLAHHDHEIEKCKKELEHVHEKYSHDKSTLETEIIKLQDIVKNFEGDLAKMSQEKLQL
Sbjct: 241 EGQLAHHDHEIEKCKKELEHVHEKYSHDKSTLETEIIKLQDIVKNFEGDLAKMSQEKLQL 300
Query: 301 KAQVKELEQASRSLDDSSAQIMKLQEIIKDLQRRLDNDSNEKKMLEERAIEFEQVRKELE 360
KAQVKELEQASRSLDDSSAQIMKLQEIIKDLQRRLDNDSNEKKMLEERAIEFEQVRKELE
Sbjct: 301 KAQVKELEQASRSLDDSSAQIMKLQEIIKDLQRRLDNDSNEKKMLEERAIEFEQVRKELE 360
Query: 361 GSRTEVAELQATINNLKADLGRALEEKSQLESRINDLEHTIACNLEEFSQEKSSLGAEIQ 420
GSRTEVAELQATINNLKADLGRALEEKSQLESRINDLEHTIACNLEEFSQEKSSLGAEIQ
Sbjct: 361 GSRTEVAELQATINNLKADLGRALEEKSQLESRINDLEHTIACNLEEFSQEKSSLGAEIQ 420
Query: 421 KLKEANASLEGKLTSTESQLQQLHXXXXXXXXXXXXXXXDLNQAIADXXXXXXXXXXXXX 480
KLKEANASLEGKLTSTESQLQQLH DLNQAIAD
Sbjct: 421 KLKEANASLEGKLTSTESQLQQLHAEKSEASISSEKQISDLNQAIADLETKLELLSSEKT 480
Query: 481 XVDNKVASLLTDVTARDEKIREMDSHLHQLHLEHVKLIAEADAVTKAVXXXXXXXXXXXX 540
VDNKVASLLTDVTARDEKIREMDSHLHQLHLEHVKLIAEADAVTKAV
Sbjct: 481 TVDNKVASLLTDVTARDEKIREMDSHLHQLHLEHVKLIAEADAVTKAVSELRARVSELEE 540
Query: 541 XXXXQKLMVSDGAEGKREAIRQLCFSLEHYRHGYQQLRQLLQGHHKRPLVMAN 593
QKLMVSDGAEGKREAIRQLCFSLEHYRHGYQQLRQLLQGHHKRPLVMAN
Sbjct: 541 EVEEQKLMVSDGAEGKREAIRQLCFSLEHYRHGYQQLRQLLQGHHKRPLVMAN 593
>Os05g0168800 Prefoldin domain containing protein
Length = 624
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 275/636 (43%), Positives = 365/636 (57%), Gaps = 55/636 (8%)
Query: 1 MKRMQRMPTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEM 60
M++MQ+ +RKS SWWWDSHISPK+SKWL++NLE M+ Q+K+ L+LIE EG+ A+KA
Sbjct: 1 MEKMQKTQSRKSSSWWWDSHISPKSSKWLSDNLEVMETQIKETLELIE-EGEPSAEKA-- 57
Query: 61 YFERRPLLVTHVENFYRMYRALAERYDNVTGELRKNIPXXXXXXXXXXXXXXXXXXXXAP 120
+L+THV+NF +MYR LA+RY NVTGELRKNIP +P
Sbjct: 58 -----GVLITHVQNFQQMYRVLAKRYGNVTGELRKNIP-SSLQSSVSFGISESDSEAQSP 111
Query: 121 PTPKPDSEETTPKQKRKPRAAGFDVFLXXXXXXXXXXXXXXXXXXXXXXXXXXVDELRED 180
+P+ D +E QK+KPR+ FDV + DE +E+
Sbjct: 112 SSPERDLQEKMS-QKQKPRSDCFDVSIGSGMSSDVSKKGSDGSSSSSESDLEL-DEAKEE 169
Query: 181 NGDGSPFALNERIAELEDXXXXXXXXXXXXXXXNTRCQC--------EKLEEKLKDSHSE 232
NG+ +AL+++I ELED N RC C + EEK + S E
Sbjct: 170 NGNSIFYALSQKIIELEDELHEVRGKLDASEEKNMRCHCNFGANSELSEHEEKQQVSDVE 229
Query: 233 ISSLQKEL-----------------------------------EGQLAHHDHEIEKCKKE 257
SSLQK+L E +LAH D EI+KCK+E
Sbjct: 230 TSSLQKDLDEVKSEKEALEAVVLVNKDEIDRLKESMVSAAKQFEVELAHRDTEIDKCKQE 289
Query: 258 LEHVHEKYSHDKSTLETEIIKLQDIVKNFEGDLAKMSQEKLQLKAQVKELEQASRSLDDS 317
LE + EKY HD S LE EI KLQ ++K FE D AK+SQEKL L+++V+ELEQ+ S + S
Sbjct: 290 LEVLSEKYLHDISALEAEIGKLQGVIKTFEDDFAKISQEKLMLESRVEELEQSVNSSNYS 349
Query: 318 SAQIMKLQEIIKDLQRRLDNDSNEKKMLEERAIEFEQVRKELEGSRTEVAELQATINNLK 377
++++ LQE++KD Q L+ S EK++L ER +EFEQ+ + E S EVA+L TI NL
Sbjct: 350 VSEMVNLQELMKDTQAELEKVSQEKEVLRERVLEFEQLLGDFENSGMEVAKLPETIKNLG 409
Query: 378 ADLGRALEEKSQLESRINDLEHTIACNLEEFSQEKSSLGAEIQKLKEANASLEGKLTSTE 437
A + L+EKS L+ RI +LE + +L+ S EKSSL AE+ KL EANASLE KL S E
Sbjct: 410 AQIEGTLQEKSVLQDRIKELEQAVHDSLQNHSLEKSSLSAELSKLSEANASLEAKLASVE 469
Query: 438 SQLQQLHXXXXXXXXXXXXXXXDLNQAIADXXXXXXXXXXXXXXVDNKVASLLTDVTARD 497
++L+Q++ LNQ +A+ VDNKV +LLTD+T RD
Sbjct: 470 AELKQVYDEKANESLNSEKEISRLNQELANVKTDLELLLSEKSLVDNKVTTLLTDITTRD 529
Query: 498 EKIREMDSHLHQLHLEHVKLIAEADAVTKAVXXXXXXXXXXXXXXXXQKLMVSDGAEGKR 557
EK+++MD L+QL LEH KL+A+AD K++ QKL++S+ AEGKR
Sbjct: 530 EKMKQMDDQLNQLQLEHSKLMAQADLARKSLSELHARVCELEKEVEMQKLVISESAEGKR 589
Query: 558 EAIRQLCFSLEHYRHGYQQLRQLLQGHHKRPLVMAN 593
EAIRQLCFSLEHYR GYQ+LRQLL KRPLVMA
Sbjct: 590 EAIRQLCFSLEHYRSGYQELRQLLHD-QKRPLVMAT 624
>Os01g0167900 KIP1-like domain containing protein
Length = 432
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 152/424 (35%), Positives = 220/424 (51%), Gaps = 78/424 (18%)
Query: 4 MQRMPTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFE 63
++R PT+K HSWWWDSHISPKNSKWLAENLEEMDKQVK+ML+LIE++GDSFAKKA+MY++
Sbjct: 5 LERNPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQ 64
Query: 64 RRPLLVTHVENFYRMYRALAERYDNVTGELRKNIPXXXXXXXXXXXXXXXXXXXXAPPTP 123
RRP+L+THVENFYRMYRALAERYDNVTGELRKNIP P+P
Sbjct: 65 RRPMLITHVENFYRMYRALAERYDNVTGELRKNIPTRLQYQGSLAGSDSELQRS---PSP 121
Query: 124 KPDSEETTPKQKRKPRAAGFDVFLXXXXXXXXXXXXXXXXXXXXXXXXXXVDELREDN-G 182
P+ +++ +++ PRAAGFDVFL D ED
Sbjct: 122 SPEPQKSWTREQ-SPRAAGFDVFLSNKSNGSPSPASRKEPEDLASQSES--DAKSEDGED 178
Query: 183 DGSPFALNERIAELEDXXXX-------XXXXXXXXXXXNTRCQCEK-----------LEE 224
DG + L++R+ ELED + RC C+ + E
Sbjct: 179 DGIAYTLHQRVLELEDELNTVNQKLHDANEKLEVLEEKSLRCHCDSKENGNGADQSAINE 238
Query: 225 KLKDSHSEISSLQKELE----------GQ-------------------------LAHHDH 249
KL+ S EI++++ LE GQ L+ D
Sbjct: 239 KLQSSQEEINNIKNSLEVLSEEHSRLLGQNKKLEAEIVNLKEEIASDRQQYEEKLSRSDA 298
Query: 250 EIEKCKKELEHVHEKYSHDKSTLETEIIKLQDIVKNFEGDLAKMSQEKLQLKAQVKELEQ 309
EI+KC++EL EK +K + + +LQ+ +++ L ++S+EKL ++ + K+LE+
Sbjct: 299 EIDKCRQELADASEKLLQEKLSNSSVTAELQETIESIRIKLEEVSEEKLLVENKFKQLEE 358
Query: 310 ASRSLDDSS------------------AQIMKLQEIIKDLQRRLDNDSNEKKMLEERAIE 351
A+ + + A+I+ L + I++L+ +L++ + EK +L+ +
Sbjct: 359 ANSEAEKYNQELSHATEKLSEEKFRHEAEILALNQAIENLKSKLESIAKEKSLLKSWFAD 418
Query: 352 FEQV 355
EQV
Sbjct: 419 LEQV 422
>Os03g0161100 KIP1-like domain containing protein
Length = 2753
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 70/88 (79%), Gaps = 2/88 (2%)
Query: 8 PTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFERRPL 67
PT+ +SWWW SHISPKNSKWL EN+ +MD VK M+KLI ++ DSFA++AEMY+++RP
Sbjct: 202 PTQ--YSWWWVSHISPKNSKWLQENVTDMDVMVKAMIKLINEDADSFARRAEMYYKKRPE 259
Query: 68 LVTHVENFYRMYRALAERYDNVTGELRK 95
L+ VE FYR YRALAERYD TG LR+
Sbjct: 260 LMNLVEEFYRAYRALAERYDQATGALRQ 287
>Os07g0695400 KIP1-like domain containing protein
Length = 1172
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Query: 4 MQRMPTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFE 63
+QR + ++SWWW SHI SKWL NL+EM+ +VK MLKL+ +E D+F K+AEMY+
Sbjct: 2 LQRAAS-NAYSWWWASHIRTTQSKWLDANLQEMETRVKIMLKLLGEEADTFGKRAEMYYR 60
Query: 64 RRPLLVTHVENFYRMYRALAERYDNVTGELRK 95
RRP ++ HVE YR YRAL ERYD+++ EL K
Sbjct: 61 RRPEVINHVEEVYRAYRALVERYDHLSKELHK 92
>Os01g0976500 t-snare domain containing protein
Length = 930
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 65/84 (77%)
Query: 12 SHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFERRPLLVTH 71
++SWWW SHI K SKWL +L++M+ +VK ML L+ +E DSF+K+AEMY++RRP ++T
Sbjct: 9 AYSWWWASHIRTKQSKWLDSHLQDMEHRVKCMLLLLGEEADSFSKRAEMYYKRRPEVITQ 68
Query: 72 VENFYRMYRALAERYDNVTGELRK 95
VE YR YR LA+RYD ++GEL K
Sbjct: 69 VEEVYRAYRGLADRYDIISGELHK 92
>Os05g0466200 KIP1-like domain containing protein
Length = 869
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 4 MQRMPTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFE 63
+QR + ++SWWW SHI SKWL L EM+ +VK ML LI +GDSF KKAE+YF+
Sbjct: 2 LQRAAS-NAYSWWWASHIRTTQSKWLDTTLHEMEDRVKAMLNLIGADGDSFGKKAELYFK 60
Query: 64 RRPLLVTHVENFYRMYRALAERYDNVTGELRK 95
RP L+ HVE +R Y+ALA+RYD ++ EL K
Sbjct: 61 SRPELINHVEEMFRSYQALADRYDRISSELHK 92
>Os07g0666600 KIP1-like domain containing protein
Length = 294
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 55/76 (72%)
Query: 12 SHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFERRPLLVTH 71
S +WW+DSH + S WL L E+D + K MLK+I+ + DSFA++AEMY+++RP+LV
Sbjct: 7 SQAWWFDSHNLARTSPWLTNTLSELDDKTKQMLKMIDQDADSFAQRAEMYYKKRPVLVDM 66
Query: 72 VENFYRMYRALAERYD 87
+ + YR +R+LAE+ D
Sbjct: 67 LGDLYRTHRSLAEQLD 82
>Os01g0835800 Prefoldin domain containing protein
Length = 820
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 50/62 (80%)
Query: 35 EMDKQVKDMLKLIEDEGDSFAKKAEMYFERRPLLVTHVENFYRMYRALAERYDNVTGELR 94
EM+ +VK M+KLI+ E D+FA+KA++YF+ RP L+ HVE YR Y+ALA+RYD V+GEL
Sbjct: 12 EMEIRVKAMIKLIDIEADTFARKADLYFKSRPDLINHVEETYRSYQALADRYDRVSGELH 71
Query: 95 KN 96
K+
Sbjct: 72 KS 73
>Os05g0119400
Length = 1034
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 49/60 (81%)
Query: 36 MDKQVKDMLKLIEDEGDSFAKKAEMYFERRPLLVTHVENFYRMYRALAERYDNVTGELRK 95
M+ +VK +L L+ +E DSFAK+AEMY++RRP +++ VE YR YRALAERYD+++GEL K
Sbjct: 1 MEDRVKFILFLLGEEADSFAKRAEMYYKRRPEVISSVEEAYRAYRALAERYDHISGELHK 60
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.312 0.128 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,016,579
Number of extensions: 505238
Number of successful extensions: 3627
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 3644
Number of HSP's successfully gapped: 10
Length of query: 593
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 487
Effective length of database: 11,501,117
Effective search space: 5601043979
Effective search space used: 5601043979
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 159 (65.9 bits)