Os07g0695400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : KIP1-like domain containing protein.
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Os07g0695400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : KIP1-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.07 | 0.415 | 9.62 | 0.522 | 0.534 | 1.34 | -0.0342 | 0.00647 | 0.132 | 8.29 | 30.5 | 245 | -- | -- |
| 78.07 | 0.412 | 9.62 | 0.523 | 0.534 | 1.34 | -0.0335 | -- | 0.133 | 8.29 | 30.48 | 245 | -- | -- |
| 78.07 | 0.412 | 9.62 | 0.522 | 0.534 | 1.34 | -- | 0.00547 | 0.133 | 8.3 | 30.45 | 245 | -- | -- |
| 78.06 | 0.412 | 9.62 | 0.522 | 0.542 | 1.34 | -- | -- | 0.133 | 8.34 | 30.45 | 235 | -- | -- |
| 88.53 | 0.438 | 9.62 | 0.653 | -- | 1.73 | -- | -0.137 | 0.167 | -- | 31.8 | 406 | -- | -- |
| 101.12 | 0.471 | 9.67 | 0.191 | 0.827 | -- | 0.0233 | -- | -0.122 | 6.58 | -- | -- | -- | -- |
| 101.12 | 0.471 | 9.67 | 0.192 | 0.827 | -- | -- | -- | -0.122 | 6.58 | -- | -- | -- | -- |
| 88.43 | 0.438 | 9.62 | 0.604 | -- | 1.72 | -- | -- | 0.184 | -- | 31.52 | 395 | -- | -- |
| 84.45 | 0.428 | 9.64 | -- | 0.579 | 1.12 | -- | -- | 0.028 | 7.85 | 30.87 | 234 | -- | -- |
| 136.76 | 0.546 | 9.69 | 0.212 | -- | -- | -- | -- | -0.105 | -- | -- | -- | -- | -- |
| 102.09 | 0.473 | 9.67 | -- | 0.83 | -- | -- | -- | -0.143 | 6.56 | -- | -- | -- | -- |
| 97.23 | 0.459 | 9.64 | -- | -- | 1.53 | -- | -- | 0.0795 | -- | 32.1 | 384 | -- | -- |
| 137.94 | 0.548 | 9.69 | -- | -- | -- | -- | -- | -0.128 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.69 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 9 | 74.89 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 14 | 75.09 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 18 | 75.44 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 19 | 75.45 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 20 | 75.45 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 21 | 75.50 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 38 | 76.19 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 49 | 76.35 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 61 | 76.61 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 119 | 77.27 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 133 | 77.40 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 142 | 77.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 195 | 77.86 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 211 | 78.00 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 231 | 78.13 | temperature | 30.0 | 270 | < th | dose dependent | no | NA | NA |
| 238 | 78.18 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 251 | 78.23 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 254 | 78.24 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 258 | 78.27 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 273 | 78.33 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 298 | 78.46 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 303 | 78.49 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 369 | 78.76 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 413 | 78.87 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 21 |
| 462 | 78.99 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 469 | 79.01 | temperature | 10.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 486 | 79.05 | temperature | 15.0 | 90 | > th | dose dependent | no | NA | NA |
| 503 | 79.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 518 | 79.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 520 | 79.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 544 | 79.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 556 | 79.20 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 561 | 79.21 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 592 | 79.27 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 601 | 79.29 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 619 | 79.32 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 734 | 79.55 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 780 | 79.66 | temperature | 30.0 | 720 | < th | dose dependent | sin | 6 | NA |
| 811 | 79.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 813 | 79.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |