Os05g0466200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : KIP1-like domain containing protein.
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Os05g0466200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : KIP1-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.74 | 0.612 | 3.81 | 0.312 | 0.843 | -0.632 | 2.15 | -0.149 | 0.0148 | 20.7 | 23.82 | 1435 | -- | -- |
| 169.79 | 0.607 | 3.81 | 0.275 | 0.846 | -0.625 | 2.16 | -- | 0.0109 | 20.7 | 23.9 | 1434 | -- | -- |
| 184.85 | 0.633 | 3.81 | 0.289 | 0.829 | -0.612 | -- | -0.254 | 0.0217 | 21 | 23.73 | 1389 | -- | -- |
| 184.89 | 0.633 | 3.82 | 0.185 | 0.833 | -0.632 | -- | -- | -0.00549 | 21.1 | 23.85 | 1429 | -- | -- |
| 201.1 | 0.66 | 3.81 | 0.0166 | -- | -1.05 | -- | 0.197 | -0.0703 | -- | 25.9 | 802 | -- | -- |
| 187.7 | 0.642 | 3.75 | 0.517 | 0.845 | -- | 2.09 | -- | 0.276 | 20.9 | -- | -- | -- | -- |
| 202.28 | 0.666 | 3.75 | 0.443 | 0.835 | -- | -- | -- | 0.273 | 21.3 | -- | -- | -- | -- |
| 200.5 | 0.659 | 3.8 | 0.13 | -- | -1.01 | -- | -- | -0.0215 | -- | 26.07 | 790 | -- | -- |
| 185.79 | 0.635 | 3.82 | -- | 0.84 | -0.634 | -- | -- | -0.017 | 21.1 | 23.87 | 1432 | -- | -- |
| 242.8 | 0.728 | 3.73 | 0.447 | -- | -- | -- | -- | 0.269 | -- | -- | -- | -- | -- |
| 207.46 | 0.674 | 3.76 | -- | 0.835 | -- | -- | -- | 0.223 | 21.3 | -- | -- | -- | -- |
| 200.92 | 0.66 | 3.8 | -- | -- | -1.04 | -- | -- | -0.0423 | -- | 26.09 | 791 | -- | -- |
| 248.06 | 0.735 | 3.74 | -- | -- | -- | -- | -- | 0.219 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 168.15 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 5 | 168.24 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 19 | 168.73 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 28 | 168.88 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 9 |
| 29 | 168.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 13 |
| 30 | 168.89 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 42 | 168.91 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 10 |
| 52 | 168.93 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 156 | 169.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 231 | 169.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 262 | 169.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 20 |
| 274 | 169.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 275 | 169.39 | temperature | 15 | 720 | > th | dose dependent | rect. | 9 | 18 |
| 299 | 169.44 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 327 | 169.51 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 338 | 169.53 | temperature | 10 | 720 | > th | dose dependent | sin | 21 | NA |
| 387 | 169.60 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 453 | 169.70 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 478 | 169.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 22 |
| 508 | 169.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 2 |
| 558 | 169.89 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 12 |
| 598 | 169.94 | temperature | 15 | 270 | > th | dose dependent | sin | 16 | NA |
| 617 | 169.97 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 732 | 170.12 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 733 | 170.12 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 857 | 170.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 862 | 170.25 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 867 | 170.26 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 5 |
| 895 | 170.29 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 7 |
| 960 | 170.35 | temperature | 30 | 720 | < th | dose independent | sin | 9 | NA |