Os07g0666600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : KIP1-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0666600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : KIP1-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.04 | 0.407 | 11.3 | 0.866 | 0.211 | -2.1 | 0.526 | 13.3 | -0.589 | 14.2 | 32.16 | 1267 | -- | -- |
| 83.37 | 0.425 | 11.5 | -1.09 | 0.268 | -0.658 | 0.472 | -- | -0.229 | 14.1 | 23.55 | 7759 | -- | -- |
| 75.09 | 0.404 | 11.3 | 0.875 | 0.218 | -2.38 | -- | 15.3 | -0.565 | 13.9 | 33.39 | 1041 | -- | -- |
| 84.24 | 0.427 | 11.5 | -1.13 | 0.268 | -0.635 | -- | -- | -0.279 | 14 | 25 | 7832 | -- | -- |
| 77.68 | 0.41 | 11.4 | 0.75 | -- | -2.38 | -- | 15 | -0.589 | -- | 33.59 | 1029 | -- | -- |
| 98.23 | 0.465 | 11.6 | -1.39 | 0.287 | -- | 0.609 | -- | -0.484 | 13.7 | -- | -- | -- | -- |
| 99.69 | 0.468 | 11.6 | -1.37 | 0.286 | -- | -- | -- | -0.48 | 13.5 | -- | -- | -- | -- |
| 87.34 | 0.435 | 11.5 | -1.12 | -- | -0.653 | -- | -- | -0.257 | -- | 25.1 | 8228 | -- | -- |
| 103.33 | 0.473 | 11.5 | -- | 0.272 | -1.33 | -- | -- | 0.00228 | 13.7 | 14.9 | 9047 | -- | -- |
| 104.71 | 0.478 | 11.6 | -1.38 | -- | -- | -- | -- | -0.486 | -- | -- | -- | -- | -- |
| 148.9 | 0.571 | 11.5 | -- | 0.31 | -- | -- | -- | -0.328 | 13.6 | -- | -- | -- | -- |
| 103.62 | 0.474 | 11.5 | -- | -- | -1.17 | -- | -- | -0.0203 | -- | 11.41 | 24168 | -- | -- |
| 154.78 | 0.581 | 11.5 | -- | -- | -- | -- | -- | -0.334 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.28 | humidity | 60 | 720 | < th | dose independent | rect. | 17 | 16 |
| 2 | 72.74 | humidity | 70 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 3 | 72.78 | humidity | 60 | 720 | < th | dose independent | rect. | 17 | 2 |
| 18 | 73.08 | humidity | 70 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 45 | 73.38 | humidity | 50 | 1440 | < th | dose independent | sin | 11 | NA |
| 61 | 73.60 | humidity | 50 | 1440 | < th | dose independent | rect. | 15 | 20 |
| 62 | 73.71 | humidity | 50 | 1440 | > th | dose independent | sin | 11 | NA |
| 64 | 73.87 | humidity | 50 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 94 | 73.99 | temperature | 30 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 108 | 74.01 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 110 | 74.06 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 13 |
| 111 | 74.07 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 10 |
| 113 | 74.08 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 138 | 74.16 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 6 |
| 150 | 74.50 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 152 | 74.61 | humidity | 60 | 720 | > th | dose independent | rect. | 17 | 16 |
| 157 | 74.84 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 159 | 74.86 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 173 | 74.89 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 19 |
| 175 | 74.93 | humidity | 60 | 720 | > th | dose independent | rect. | 17 | 8 |
| 183 | 75.06 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 202 | 75.13 | humidity | 60 | 1440 | < th | dose dependent | sin | 11 | NA |
| 251 | 75.27 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 322 | 75.43 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 369 | 75.69 | wind | 9 | 43200 | > th | dose independent | rect. | 2 | 14 |
| 371 | 75.71 | wind | 9 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 409 | 75.90 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 448 | 75.98 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 453 | 75.98 | wind | 9 | 43200 | > th | dose independent | rect. | 7 | 9 |
| 472 | 76.05 | radiation | 30 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 476 | 76.07 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 487 | 76.15 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 491 | 76.16 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 7 |
| 498 | 76.19 | wind | 9 | 43200 | < th | dose independent | rect. | 2 | 13 |
| 620 | 76.40 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 22 |
| 663 | 76.54 | temperature | 30 | 1440 | > th | dose dependent | sin | 12 | NA |
| 702 | 76.72 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 14 |
| 733 | 76.82 | radiation | 40 | 43200 | < th | dose independent | rect. | 4 | 8 |
| 745 | 76.82 | radiation | 40 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 751 | 76.83 | radiation | 40 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 758 | 76.84 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 770 | 76.85 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 772 | 76.85 | wind | 7 | 43200 | > th | dose dependent | rect. | 3 | 14 |
| 822 | 76.98 | wind | 7 | 43200 | > th | dose dependent | rect. | 24 | 17 |
| 838 | 77.07 | wind | 1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 839 | 77.07 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 869 | 77.13 | wind | 7 | 43200 | > th | dose dependent | rect. | 7 | 9 |
| 877 | 77.16 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 879 | 77.18 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 900 | 77.22 | radiation | 30 | 43200 | > th | dose dependent | rect. | 7 | 5 |
| 940 | 77.30 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 970 | 77.30 | wind | 1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 1000 | 77.33 | wind | 9 | 43200 | > th | dose independent | sin | 2 | NA |