BLAST Search Results

BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0666600 Os07g0666600|AK068545
         (294 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0666600  KIP1-like domain containing protein                 500   e-142
Os01g0167900  KIP1-like domain containing protein                  90   2e-18
Os03g0161100  KIP1-like domain containing protein                  89   5e-18
Os01g0168100  t-snare domain containing protein                    89   5e-18
Os07g0695400  KIP1-like domain containing protein                  82   6e-16
Os01g0976500  t-snare domain containing protein                    80   2e-15
Os05g0466200  KIP1-like domain containing protein                  80   2e-15

>Os07g0666600 KIP1-like domain containing protein
          Length = 294

 Score =  500 bits (1288), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 246/294 (83%), Positives = 246/294 (83%)

Query: 1   MVQKELSQAWWFDSHNLARTSPWLTNTLSELDDKTKQMLKMIDQDADSFAQRAEMYYKKR 60
           MVQKELSQAWWFDSHNLARTSPWLTNTLSELDDKTKQMLKMIDQDADSFAQRAEMYYKKR
Sbjct: 1   MVQKELSQAWWFDSHNLARTSPWLTNTLSELDDKTKQMLKMIDQDADSFAQRAEMYYKKR 60

Query: 61  PVLVDMLGDLYRTHRSLAEQLDLLKNGNGTRHTVFGPSSCTQSWSHQXXXXXMGGKGTTG 120
           PVLVDMLGDLYRTHRSLAEQLDLLKNGNGTRHTVFGPSSCTQSWSHQ     MGGKGTTG
Sbjct: 61  PVLVDMLGDLYRTHRSLAEQLDLLKNGNGTRHTVFGPSSCTQSWSHQAAAAAMGGKGTTG 120

Query: 121 SRSSISLCSDNYDSESEVDDPXXXXXXXXXXXXXXXXKHPSQSQADQAAQLELMHAEIEM 180
           SRSSISLCSDNYDSESEVDDP                KHPSQSQADQAAQLELMHAEIEM
Sbjct: 121 SRSSISLCSDNYDSESEVDDPEQENMEEELSESEDMMKHPSQSQADQAAQLELMHAEIEM 180

Query: 181 LKEKNAELQKASAENEMLKQKNEELQRVSEENMXXXXXXXXXXXXXXXVIRQLASSFDIV 240
           LKEKNAELQKASAENEMLKQKNEELQRVSEENM               VIRQLASSFDIV
Sbjct: 181 LKEKNAELQKASAENEMLKQKNEELQRVSEENMALKAELAAKDEEKREVIRQLASSFDIV 240

Query: 241 KKENFTLREYXXXXXXXXXXXXRGFDFKKLTKDLFTAKLFTAHCKATTGPMVAL 294
           KKENFTLREY            RGFDFKKLTKDLFTAKLFTAHCKATTGPMVAL
Sbjct: 241 KKENFTLREYIIKNSKNSSSSSRGFDFKKLTKDLFTAKLFTAHCKATTGPMVAL 294



>Os01g0167900 KIP1-like domain containing protein
          Length = 432

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 56/74 (75%)

Query: 9  AWWFDSHNLARTSPWLTNTLSELDDKTKQMLKMIDQDADSFAQRAEMYYKKRPVLVDMLG 68
          +WW+DSH   + S WL   L E+D + K+ML++I++D DSFA++A+MYY++RP+L+  + 
Sbjct: 15 SWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRPMLITHVE 74

Query: 69 DLYRTHRSLAEQLD 82
          + YR +R+LAE+ D
Sbjct: 75 NFYRMYRALAERYD 88



>Os03g0161100 KIP1-like domain containing protein
          Length = 2753

 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 56/74 (75%)

Query: 9   AWWFDSHNLARTSPWLTNTLSELDDKTKQMLKMIDQDADSFAQRAEMYYKKRPVLVDMLG 68
           +WW+ SH   + S WL   ++++D   K M+K+I++DADSFA+RAEMYYKKRP L++++ 
Sbjct: 206 SWWWVSHISPKNSKWLQENVTDMDVMVKAMIKLINEDADSFARRAEMYYKKRPELMNLVE 265

Query: 69  DLYRTHRSLAEQLD 82
           + YR +R+LAE+ D
Sbjct: 266 EFYRAYRALAERYD 279



>Os01g0168100 t-snare domain containing protein
          Length = 593

 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 55/76 (72%)

Query: 7  SQAWWFDSHNLARTSPWLTNTLSELDDKTKQMLKMIDQDADSFAQRAEMYYKKRPVLVDM 66
          S +WW+DSH   + S WL   L E+D + K MLK+I+ + DSFA++AEMY+++RP+LV  
Sbjct: 12 SHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFERRPLLVTH 71

Query: 67 LGDLYRTHRSLAEQLD 82
          + + YR +R+LAE+ D
Sbjct: 72 VENFYRMYRALAERYD 87



>Os07g0695400 KIP1-like domain containing protein
          Length = 1172

 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 67/105 (63%), Gaps = 5/105 (4%)

Query: 1   MVQKELSQA--WWFDSHNLARTSPWLTNTLSELDDKTKQMLKMIDQDADSFAQRAEMYYK 58
           M+Q+  S A  WW+ SH     S WL   L E++ + K MLK++ ++AD+F +RAEMYY+
Sbjct: 1   MLQRAASNAYSWWWASHIRTTQSKWLDANLQEMETRVKIMLKLLGEEADTFGKRAEMYYR 60

Query: 59  KRPVLVDMLGDLYRTHRSLAEQLD-LLKNGNGTRHTVFGPSSCTQ 102
           +RP +++ + ++YR +R+L E+ D L K  +   HT+   ++C Q
Sbjct: 61  RRPEVINHVEEVYRAYRALVERYDHLSKELHKANHTI--ATACPQ 103



>Os01g0976500 t-snare domain containing protein
          Length = 930

 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 64/101 (63%), Gaps = 6/101 (5%)

Query: 1   MVQKELSQA--WWFDSHNLARTSPWLTNTLSELDDKTKQMLKMIDQDADSFAQRAEMYYK 58
           M+Q+  S A  WW+ SH   + S WL + L +++ + K ML ++ ++ADSF++RAEMYYK
Sbjct: 1   MLQRAASNAYSWWWASHIRTKQSKWLDSHLQDMEHRVKCMLLLLGEEADSFSKRAEMYYK 60

Query: 59  KRPVLVDMLGDLYRTHRSLAEQLDL----LKNGNGTRHTVF 95
           +RP ++  + ++YR +R LA++ D+    L   N T  T F
Sbjct: 61  RRPEVITQVEEVYRAYRGLADRYDIISGELHKANHTIATAF 101



>Os05g0466200 KIP1-like domain containing protein
          Length = 869

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 62/101 (61%), Gaps = 6/101 (5%)

Query: 1   MVQKELSQA--WWFDSHNLARTSPWLTNTLSELDDKTKQMLKMIDQDADSFAQRAEMYYK 58
           M+Q+  S A  WW+ SH     S WL  TL E++D+ K ML +I  D DSF ++AE+Y+K
Sbjct: 1   MLQRAASNAYSWWWASHIRTTQSKWLDTTLHEMEDRVKAMLNLIGADGDSFGKKAELYFK 60

Query: 59  KRPVLVDMLGDLYRTHRSLAEQLDL----LKNGNGTRHTVF 95
            RP L++ + +++R++++LA++ D     L   N T  T F
Sbjct: 61  SRPELINHVEEMFRSYQALADRYDRISSELHKANHTIATAF 101



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.313    0.126    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,472,522
Number of extensions: 254142
Number of successful extensions: 829
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 825
Number of HSP's successfully gapped: 7
Length of query: 294
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 194
Effective length of database: 11,814,401
Effective search space: 2291993794
Effective search space used: 2291993794
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 155 (64.3 bits)