Os03g0161100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : KIP1-like domain containing protein.
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Os03g0161100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : KIP1-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.9 | 0.396 | 7.9 | 0.888 | 0.277 | -0.698 | 0.841 | 6.26 | -0.0581 | 8.94 | 25.67 | 3682 | -- | -- |
| 79.44 | 0.418 | 8.07 | -0.495 | 0.32 | -0.0631 | 0.674 | -- | -0.337 | 8.94 | 25.67 | 3682 | -- | -- |
| 72.63 | 0.397 | 7.9 | 0.985 | 0.299 | -0.801 | -- | 6.86 | -0.0944 | 7.99 | 26.57 | 4039 | -- | -- |
| 75.33 | 0.404 | 8.11 | -0.952 | 0.314 | 0.468 | -- | -- | -0.499 | 6.83 | 32.92 | 47480 | -- | -- |
| 77.23 | 0.409 | 7.89 | 1.13 | -- | -0.937 | -- | 7.7 | -0.0752 | -- | 26.72 | 3816 | -- | -- |
| 79.5 | 0.418 | 8.08 | -0.503 | 0.323 | -- | 0.663 | -- | -0.34 | 8.69 | -- | -- | -- | -- |
| 80.79 | 0.421 | 8.08 | -0.484 | 0.331 | -- | -- | -- | -0.341 | 8.08 | -- | -- | -- | -- |
| 80.67 | 0.418 | 8.12 | -0.986 | -- | 0.493 | -- | -- | -0.484 | -- | 32.9 | 47520 | -- | -- |
| 82.69 | 0.424 | 8.04 | -- | 0.328 | -0.332 | -- | -- | -0.188 | 8.02 | 6.198 | 47520 | -- | -- |
| 86.78 | 0.435 | 8.08 | -0.481 | -- | -- | -- | -- | -0.337 | -- | -- | -- | -- | -- |
| 86.95 | 0.436 | 8.06 | -- | 0.328 | -- | -- | -- | -0.287 | 8.19 | -- | -- | -- | -- |
| 88.58 | 0.438 | 8.05 | -- | -- | -0.333 | -- | -- | -0.184 | -- | 4.994 | 47520 | -- | -- |
| 92.88 | 0.45 | 8.07 | -- | -- | -- | -- | -- | -0.284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.23 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 7 | 22 |
| 2 | 64.48 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 4 | 65.31 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 7 | 65.64 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 22 |
| 12 | 66.14 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 17 | 66.49 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 19 | 66.69 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 2 |
| 22 | 66.73 | wind | 7.0 | 10 | < th | dose independent | rect. | 5 | 2 |
| 24 | 66.73 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 2 |
| 26 | 66.73 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 2 |
| 27 | 66.73 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 2 |
| 30 | 66.73 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 2 |
| 31 | 66.73 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 2 |
| 32 | 66.73 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 2 |
| 35 | 66.73 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 22 |
| 37 | 66.74 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 2 |
| 38 | 66.74 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 2 |
| 40 | 66.76 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 2 |
| 47 | 66.88 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 22 |
| 48 | 66.88 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 22 |
| 49 | 66.92 | wind | 9.0 | 10 | < th | dose independent | rect. | 7 | 22 |
| 51 | 66.96 | wind | 1.0 | 30 | > th | dose independent | rect. | 5 | 2 |
| 76 | 67.10 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 108 | 67.38 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 2 |
| 120 | 67.50 | wind | 9.0 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 125 | 67.54 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 134 | 67.64 | wind | 1.0 | 10 | > th | dose independent | rect. | 12 | 19 |
| 141 | 67.66 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 165 | 67.73 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 168 | 67.73 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 172 | 67.73 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 177 | 67.73 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 178 | 67.73 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 179 | 67.73 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 21 |
| 187 | 67.76 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 5 | 2 |
| 192 | 67.82 | wind | 9.0 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 194 | 67.86 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 208 | 67.96 | wind | 7.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 217 | 68.00 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 261 | 68.30 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 270 | 68.35 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 279 | 68.44 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 285 | 68.47 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 291 | 68.50 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 320 | 68.59 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 341 | 68.62 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 352 | 68.69 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 15 | 18 |
| 356 | 68.73 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 12 | 5 |
| 370 | 68.73 | temperature | 20.0 | 10 | > th | dose independent | rect. | 7 | 22 |
| 378 | 68.78 | humidity | 50.0 | 10 | > th | dose independent | rect. | 7 | 22 |
| 379 | 68.79 | radiation | 20.0 | 43200 | > th | dose independent | sin | 17 | NA |
| 384 | 68.81 | radiation | 10.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 443 | 68.86 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 3 |
| 479 | 68.97 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 535 | 69.01 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 12 | 4 |
| 545 | 69.03 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 591 | 69.06 | radiation | 20.0 | 43200 | > th | dose independent | no | NA | NA |
| 687 | 69.07 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 691 | 69.07 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 8 | 9 |
| 693 | 69.08 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 694 | 69.08 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 708 | 69.10 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 8 | 15 |
| 710 | 69.10 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 8 | 19 |
| 819 | 69.16 | radiation | 20.0 | 43200 | < th | dose dependent | sin | 22 | NA |
| 824 | 69.17 | radiation | 30.0 | 43200 | < th | dose dependent | sin | 19 | NA |
| 892 | 69.19 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 12 | 23 |
| 916 | 69.21 | radiation | 20.0 | 43200 | < th | dose dependent | no | NA | NA |
| 988 | 69.22 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 10 | 23 |