Os05g0168800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Prefoldin domain containing protein.
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Os05g0168800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Prefoldin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.44 | 0.507 | 6.12 | 1.57 | 1.37 | 0.234 | 0.243 | 3.23 | 0.554 | 15 | 1002 | 3641 | -- | -- |
| 123.15 | 0.517 | 6.09 | 1.66 | 1.37 | 0.756 | 0.0475 | -- | 0.552 | 14.8 | 999.2 | 1814 | -- | -- |
| 116.64 | 0.503 | 6.12 | 1.57 | 1.38 | 0.235 | -- | 3.22 | 0.553 | 15 | 1002 | 3640 | -- | -- |
| 123.08 | 0.517 | 6.09 | 1.69 | 1.38 | 0.765 | -- | -- | 0.55 | 14.9 | 999 | 1742 | -- | -- |
| 225.22 | 0.699 | 6.13 | 1.52 | -- | 0.201 | -- | 3.45 | 0.528 | -- | 1002 | 3759 | -- | -- |
| 132.18 | 0.539 | 6.08 | 1.59 | 1.38 | -- | 0.231 | -- | 0.589 | 14.9 | -- | -- | -- | -- |
| 132.36 | 0.539 | 6.08 | 1.59 | 1.38 | -- | -- | -- | 0.59 | 14.9 | -- | -- | -- | -- |
| 232.7 | 0.71 | 6.1 | 1.63 | -- | 0.675 | -- | -- | 0.519 | -- | 999.8 | 1074 | -- | -- |
| 197.44 | 0.654 | 6.1 | -- | 1.32 | 0.369 | -- | -- | 0.456 | 14.8 | 1000 | 1884 | -- | -- |
| 241.66 | 0.726 | 6.09 | 1.53 | -- | -- | -- | -- | 0.555 | -- | -- | -- | -- | -- |
| 199.29 | 0.66 | 6.12 | -- | 1.35 | -- | -- | -- | 0.413 | 14.9 | -- | -- | -- | -- |
| 300.71 | 0.808 | 6.12 | -- | -- | 0.224 | -- | -- | 0.41 | -- | 1003 | 1163 | -- | -- |
| 303.8 | 0.814 | 6.13 | -- | -- | -- | -- | -- | 0.384 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.81 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 8 | 110.74 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 10 | 111.07 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 16 | 111.37 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 19 | 111.47 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 38 | 112.45 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 41 | 112.53 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 47 | 112.65 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 16 | 17 |
| 48 | 112.70 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 49 | 112.73 | radiation | 1.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 51 | 112.75 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 16 | 17 |
| 56 | 112.79 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 19 |
| 57 | 112.79 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 59 | 112.83 | radiation | 1.0 | 270 | > th | dose independent | sin | 2 | NA |
| 61 | 112.83 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 16 | 19 |
| 62 | 112.84 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 20 | 6 |
| 63 | 112.86 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 16 | 7 |
| 70 | 112.95 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 74 | 112.96 | humidity | 70.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 77 | 112.98 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 85 | 113.04 | humidity | 70.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 86 | 113.04 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 16 | 9 |
| 87 | 113.05 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 92 | 113.06 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 100 | 113.09 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 21 | 4 |
| 109 | 113.13 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 14 | 22 |
| 119 | 113.19 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 126 | 113.22 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 9 | 15 |
| 132 | 113.23 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 9 | 19 |
| 162 | 113.29 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 163 | 113.29 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 16 | 7 |
| 168 | 113.29 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 3 | 20 |
| 172 | 113.29 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 19 | 23 |
| 215 | 113.33 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 8 | 17 |
| 240 | 113.35 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 248 | 113.36 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 249 | 113.36 | humidity | 80.0 | 43200 | < th | dose dependent | no | NA | NA |
| 252 | 113.36 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 14 | 16 |
| 266 | 113.39 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 270 | 113.39 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 289 | 113.41 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 290 | 113.41 | humidity | 80.0 | 43200 | < th | dose dependent | sin | 17 | NA |
| 315 | 113.44 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 2 | 16 |
| 321 | 113.45 | humidity | 80.0 | 43200 | < th | dose dependent | sin | 1 | NA |
| 328 | 113.46 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 356 | 113.48 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 10 | 7 |
| 371 | 113.50 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 387 | 113.51 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 397 | 113.52 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 9 | 9 |
| 404 | 113.53 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 7 | 11 |
| 426 | 113.55 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 449 | 113.57 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 462 | 113.59 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 505 | 113.63 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 566 | 113.69 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 863 | 114.01 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 865 | 114.01 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 907 | 114.07 | humidity | 70.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 938 | 114.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 943 | 114.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 966 | 114.15 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 972 | 114.16 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 984 | 114.17 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 6 | 22 |
| 994 | 114.18 | humidity | 70.0 | 43200 | < th | dose independent | no | NA | NA |