BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0167900 Os01g0167900|AK072705
(432 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0167900 KIP1-like domain containing protein 844 0.0
Os01g0168100 t-snare domain containing protein 265 3e-71
Os05g0168800 Prefoldin domain containing protein 216 2e-56
Os03g0161100 KIP1-like domain containing protein 137 2e-32
Os01g0976500 t-snare domain containing protein 116 4e-26
Os07g0695400 KIP1-like domain containing protein 115 8e-26
Os05g0466200 KIP1-like domain containing protein 113 3e-25
Os07g0666600 KIP1-like domain containing protein 90 3e-18
Os05g0119400 83 5e-16
Os01g0835800 Prefoldin domain containing protein 79 6e-15
>Os01g0167900 KIP1-like domain containing protein
Length = 432
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/432 (96%), Positives = 419/432 (96%)
Query: 1 MKPPLERNPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQ 60
MKPPLERNPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQ
Sbjct: 1 MKPPLERNPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQ 60
Query: 61 MYYQRRPMLITHVENFYRMYRALAERYDNVTGELRKNIPTRLQYQGSLAGSDSELQRSPS 120
MYYQRRPMLITHVENFYRMYRALAERYDNVTGELRKNIPTRLQYQGSLAGSDSELQRSPS
Sbjct: 61 MYYQRRPMLITHVENFYRMYRALAERYDNVTGELRKNIPTRLQYQGSLAGSDSELQRSPS 120
Query: 121 PSPEPQKSWTREQSPRAAGFDVFLSNKSNGSPSPASRKEPEDLASQSESDAKSEDGEDDG 180
PSPEPQKSWTREQSPRAAGFDVFLSNKSNGSPSPASRKEPEDLASQSESDAKSEDGEDDG
Sbjct: 121 PSPEPQKSWTREQSPRAAGFDVFLSNKSNGSPSPASRKEPEDLASQSESDAKSEDGEDDG 180
Query: 181 IAYTLHQRVLELEDELNTVNQKLHDANEKLEVLEEKSLRCHCDSKENGNGADQSAINEKL 240
IAYTLHQRVLELEDELNTVNQKLHDANEKLEVLEEKSLRCHCDSKENGNGADQSAINEKL
Sbjct: 181 IAYTLHQRVLELEDELNTVNQKLHDANEKLEVLEEKSLRCHCDSKENGNGADQSAINEKL 240
Query: 241 QSSQEEINNIKNSLEVLSEEHSRLLGQNKKLEAEIVNLKEEIASDRQQYEEKLSRSDAEI 300
QSSQEEINNIKNSLEVLSEEHSRLLGQNKKLEAEIVNLKEEIASDRQQYEEKLSRSDAEI
Sbjct: 241 QSSQEEINNIKNSLEVLSEEHSRLLGQNKKLEAEIVNLKEEIASDRQQYEEKLSRSDAEI 300
Query: 301 DKCRQELADASEKLLQEKLSNSSVTAELQETIESIRIXXXXXXXXXXXXXNKFKQLEEAN 360
DKCRQELADASEKLLQEKLSNSSVTAELQETIESIRI NKFKQLEEAN
Sbjct: 301 DKCRQELADASEKLLQEKLSNSSVTAELQETIESIRIKLEEVSEEKLLVENKFKQLEEAN 360
Query: 361 SEAEKYNQELSHATEKLSEEKFRHEAEILALNQAIENLKSKLESIAKEKSLLKSWFADLE 420
SEAEKYNQELSHATEKLSEEKFRHEAEILALNQAIENLKSKLESIAKEKSLLKSWFADLE
Sbjct: 361 SEAEKYNQELSHATEKLSEEKFRHEAEILALNQAIENLKSKLESIAKEKSLLKSWFADLE 420
Query: 421 QVVERGRRIFPE 432
QVVERGRRIFPE
Sbjct: 421 QVVERGRRIFPE 432
>Os01g0168100 t-snare domain containing protein
Length = 593
Score = 265 bits (678), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 187/441 (42%), Positives = 253/441 (57%), Gaps = 65/441 (14%)
Query: 5 LERNPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQ 64
++R PT+K HSWWWDSHISPKNSKWLAENLEEMDKQVK+ML+LIE++GDSFAKKA+MY++
Sbjct: 4 MQRMPTRKSHSWWWDSHISPKNSKWLAENLEEMDKQVKDMLKLIEDEGDSFAKKAEMYFE 63
Query: 65 RRPMLITHVENFYRMYRALAERYDNVTGELRKNIP--TRLQYQGSLAGSDSELQRSPSPS 122
RRP+L+THVENFYRMYRALAERYDNVTGELRKNIP + Q S++ SDSE Q +P P+
Sbjct: 64 RRPLLVTHVENFYRMYRALAERYDNVTGELRKNIPSSLQSQGSLSISESDSETQSAP-PT 122
Query: 123 PEPQKSWT---REQSPRAAGFDVFLSNKSNGSPSPASRKEPEDLASQSES----DAKSED 175
P+P T +++ PRAAGFDVFL S GS + + +S SES D ED
Sbjct: 123 PKPDSEETTPKQKRKPRAAGFDVFLG--SGGSSDISKKGSDGSSSSSSESDSEVDELRED 180
Query: 176 GEDDGIAYTLHQRVLELEDELNTVNQKLHDANEKLEVLEEKSLRCHCDSKENGNGADQSA 235
DG + L++R+ ELEDEL +A EKLE LEEK+ RC C+
Sbjct: 181 N-GDGSPFALNERIAELEDELQ-------EAREKLEALEEKNTRCQCEK----------- 221
Query: 236 INEKLQSSQEEINNIKNSLEVLSEEHSRLLGQNKKLEAEIVNLKEEIASDRQQYEEKLSR 295
+ EKL+ S EI++++ LE H + + KK E+ ++ E+ + D+ E ++ +
Sbjct: 222 LEEKLKDSHSEISSLQKELEGQLAHHDHEIEKCKK---ELEHVHEKYSHDKSTLETEIIK 278
Query: 296 SDAEIDKCRQELADASEKLLQEK------------LSNSSV-TAELQETIESIRIXXXXX 342
+ +LA S++ LQ K L +SS +LQE I+ ++
Sbjct: 279 LQDIVKNFEGDLAKMSQEKLQLKAQVKELEQASRSLDDSSAQIMKLQEIIKDLQ------ 332
Query: 343 XXXXXXXXNKFKQLEEANSEAEKYNQELSHATEKLSEEKFRHEAEILALNQAIENLKSKL 402
N+ K LEE E E+ +EL + E+ L I NLK+ L
Sbjct: 333 -RRLDNDSNEKKMLEERAIEFEQVRKELEGS-----------RTEVAELQATINNLKADL 380
Query: 403 ESIAKEKSLLKSWFADLEQVV 423
+EKS L+S DLE +
Sbjct: 381 GRALEEKSQLESRINDLEHTI 401
>Os05g0168800 Prefoldin domain containing protein
Length = 624
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 246/450 (54%), Gaps = 51/450 (11%)
Query: 5 LERNPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQ 64
+++ ++K SWWWDSHISPK+SKWL++NLE M+ Q+KE L+LIEE G+ A+KA
Sbjct: 4 MQKTQSRKSSSWWWDSHISPKSSKWLSDNLEVMETQIKETLELIEE-GEPSAEKA----- 57
Query: 65 RRPMLITHVENFYRMYRALAERYDNVTGELRKNIPTRLQYQGS--LAGSDSELQRSPSPS 122
+LITHV+NF +MYR LA+RY NVTGELRKNIP+ LQ S ++ SDSE Q SP
Sbjct: 58 --GVLITHVQNFQQMYRVLAKRYGNVTGELRKNIPSSLQSSVSFGISESDSEAQSPSSPE 115
Query: 123 PEPQKSWTREQSPRAAGFDVFLSN--KSNGSPSPASRKEPEDLASQSESDAKSEDGEDDG 180
+ Q+ +++Q PR+ FDV + + S+ S + + +AK E+G +
Sbjct: 116 RDLQEKMSQKQKPRSDCFDVSIGSGMSSDVSKKGSDGSSSSSESDLELDEAKEENG--NS 173
Query: 181 IAYTLHQRVLELEDELNTVNQKLHDANEKLEVLEEKSLRCHCDSKENGNGADQSAINEKL 240
I Y L Q+++ELEDE LH+ KL+ EEK++RCHC+ G ++ S EK
Sbjct: 174 IFYALSQKIIELEDE-------LHEVRGKLDASEEKNMRCHCNF---GANSELSEHEEKQ 223
Query: 241 QSSQEEINNIKNSLEVLSEEHSRLLGQNKKLEAEIVNLKEEIASDRQQYEEKLSRSDAEI 300
Q S E ++++ L+ + E L + EI LKE + S +Q+E +L+ D EI
Sbjct: 224 QVSDVETSSLQKDLDEVKSEKEALEAVVLVNKDEIDRLKESMVSAAKQFEVELAHRDTEI 283
Query: 301 DKCRQELADASEKLLQEKLSNSSVTAELQETIESIRIXXXXXXXXXXXXXNKFKQLEE-- 358
DKC+QEL SEK L + + + +LQ I++ ++ ++LE+
Sbjct: 284 DKCKQELEVLSEKYLHDISALEAEIGKLQGVIKTFEDDFAKISQEKLMLESRVEELEQSV 343
Query: 359 ---ANSEAEKYN-QELSHAT----EKLSEEK----------------FRHEA-EILALNQ 393
S +E N QEL T EK+S+EK F + E+ L +
Sbjct: 344 NSSNYSVSEMVNLQELMKDTQAELEKVSQEKEVLRERVLEFEQLLGDFENSGMEVAKLPE 403
Query: 394 AIENLKSKLESIAKEKSLLKSWFADLEQVV 423
I+NL +++E +EKS+L+ +LEQ V
Sbjct: 404 TIKNLGAQIEGTLQEKSVLQDRIKELEQAV 433
>Os03g0161100 KIP1-like domain containing protein
Length = 2753
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 100/165 (60%), Gaps = 9/165 (5%)
Query: 8 NPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRP 67
NPT+ +SWWW SHISPKNSKWL EN+ +MD VK M++LI ED DSFA++A+MYY++RP
Sbjct: 201 NPTQ--YSWWWVSHISPKNSKWLQENVTDMDVMVKAMIKLINEDADSFARRAEMYYKKRP 258
Query: 68 MLITHVENFYRMYRALAERYDNVTGELRKNIPTRLQYQGSLAGSDSELQRSPSPSPEPQK 127
L+ VE FYR YRALAERYD TG LR+ T + + S SE SPS + +
Sbjct: 259 ELMNLVEEFYRAYRALAERYDQATGALRQAHRTISEAFPNQMPSMSE--DSPSSGQDVEP 316
Query: 128 SWTREQSPRAAGFDV-FLSNKSNGSPSPASRK----EPEDLASQS 167
P A FD+ L + + SP + K +P+D+ S
Sbjct: 317 RTPEVLMPTRAPFDLDDLQDAAGVSPHLLTVKRNGTQPDDIGFSS 361
>Os01g0976500 t-snare domain containing protein
Length = 930
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 69/98 (70%), Gaps = 7/98 (7%)
Query: 14 HSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRPMLITHV 73
+SWWW SHI K SKWL +L++M+ +VK ML L+ E+ DSF+K+A+MYY+RRP +IT V
Sbjct: 10 YSWWWASHIRTKQSKWLDSHLQDMEHRVKCMLLLLGEEADSFSKRAEMYYKRRPEVITQV 69
Query: 74 ENFYRMYRALAERYDNVTGELRK-------NIPTRLQY 104
E YR YR LA+RYD ++GEL K P ++QY
Sbjct: 70 EEVYRAYRGLADRYDIISGELHKANHTIATAFPDQVQY 107
>Os07g0695400 KIP1-like domain containing protein
Length = 1172
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 63/83 (75%)
Query: 14 HSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRPMLITHV 73
+SWWW SHI SKWL NL+EM+ +VK ML+L+ E+ D+F K+A+MYY+RRP +I HV
Sbjct: 10 YSWWWASHIRTTQSKWLDANLQEMETRVKIMLKLLGEEADTFGKRAEMYYRRRPEVINHV 69
Query: 74 ENFYRMYRALAERYDNVTGELRK 96
E YR YRAL ERYD+++ EL K
Sbjct: 70 EEVYRAYRALVERYDHLSKELHK 92
>Os05g0466200 KIP1-like domain containing protein
Length = 869
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 68/106 (64%), Gaps = 5/106 (4%)
Query: 14 HSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRPMLITHV 73
+SWWW SHI SKWL L EM+ +VK ML LI DGDSF KKA++Y++ RP LI HV
Sbjct: 10 YSWWWASHIRTTQSKWLDTTLHEMEDRVKAMLNLIGADGDSFGKKAELYFKSRPELINHV 69
Query: 74 ENFYRMYRALAERYDNVTGELRK---NIPTRL--QYQGSLAGSDSE 114
E +R Y+ALA+RYD ++ EL K I T Q Q S+ +D E
Sbjct: 70 EEMFRSYQALADRYDRISSELHKANHTIATAFPDQIQFSMQDADGE 115
>Os07g0666600 KIP1-like domain containing protein
Length = 294
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 56/74 (75%)
Query: 15 SWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRPMLITHVE 74
+WW+DSH + S WL L E+D + K+ML++I++D DSFA++A+MYY++RP+L+ +
Sbjct: 9 AWWFDSHNLARTSPWLTNTLSELDDKTKQMLKMIDQDADSFAQRAEMYYKKRPVLVDMLG 68
Query: 75 NFYRMYRALAERYD 88
+ YR +R+LAE+ D
Sbjct: 69 DLYRTHRSLAEQLD 82
>Os05g0119400
Length = 1034
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 7/75 (9%)
Query: 37 MDKQVKEMLQLIEEDGDSFAKKAQMYYQRRPMLITHVENFYRMYRALAERYDNVTGELRK 96
M+ +VK +L L+ E+ DSFAK+A+MYY+RRP +I+ VE YR YRALAERYD+++GEL K
Sbjct: 1 MEDRVKFILFLLGEEADSFAKRAEMYYKRRPEVISSVEEAYRAYRALAERYDHISGELHK 60
Query: 97 -------NIPTRLQY 104
P ++QY
Sbjct: 61 ANHTIATAFPDQVQY 75
>Os01g0835800 Prefoldin domain containing protein
Length = 820
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 36 EMDKQVKEMLQLIEEDGDSFAKKAQMYYQRRPMLITHVENFYRMYRALAERYDNVTGELR 95
EM+ +VK M++LI+ + D+FA+KA +Y++ RP LI HVE YR Y+ALA+RYD V+GEL
Sbjct: 12 EMEIRVKAMIKLIDIEADTFARKADLYFKSRPDLINHVEETYRSYQALADRYDRVSGELH 71
Query: 96 KN 97
K+
Sbjct: 72 KS 73
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.306 0.124 0.336
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,667,915
Number of extensions: 596922
Number of successful extensions: 4677
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 4650
Number of HSP's successfully gapped: 11
Length of query: 432
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 328
Effective length of database: 11,605,545
Effective search space: 3806618760
Effective search space used: 3806618760
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 157 (65.1 bits)