BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0517100 Os12g0517100|AK073020
(501 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0517100 Cyclin-like F-box domain containing protein 1034 0.0
Os12g0517000 Cyclin-like F-box domain containing protein 490 e-139
Os04g0370600 4Fe-4S ferredoxin, iron-sulfur binding domain ... 457 e-129
Os12g0516900 Cyclin-like F-box domain containing protein 429 e-120
Os04g0370500 Leucine-rich repeat, cysteine-containing conta... 404 e-112
Os04g0371600 Leucine-rich repeat, cysteine-containing conta... 252 4e-67
Os12g0526600 Cyclin-like F-box domain containing protein 214 1e-55
Os02g0798900 Conserved hypothetical protein 187 1e-47
Os04g0370300 Conserved hypothetical protein 174 1e-43
Os04g0370800 165 6e-41
>Os12g0517100 Cyclin-like F-box domain containing protein
Length = 501
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/501 (100%), Positives = 501/501 (100%)
Query: 1 MASDGSFFRYGERQIAAKPEDCPAMSSMLSLEDLPDALLAEIVKRITNTSDLKSISLVSK 60
MASDGSFFRYGERQIAAKPEDCPAMSSMLSLEDLPDALLAEIVKRITNTSDLKSISLVSK
Sbjct: 1 MASDGSFFRYGERQIAAKPEDCPAMSSMLSLEDLPDALLAEIVKRITNTSDLKSISLVSK 60
Query: 61 RLYTIEAEQRSSIRVGSDLCPAIDALSALCSRFPNLLEVEMDYSGWKFHWNLLEKHIFSL 120
RLYTIEAEQRSSIRVGSDLCPAIDALSALCSRFPNLLEVEMDYSGWKFHWNLLEKHIFSL
Sbjct: 61 RLYTIEAEQRSSIRVGSDLCPAIDALSALCSRFPNLLEVEMDYSGWKFHWNLLEKHIFSL 120
Query: 121 HFPVLRDLTLYIDDIRMGCLASCKNLMSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKC 180
HFPVLRDLTLYIDDIRMGCLASCKNLMSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKC
Sbjct: 121 HFPVLRDLTLYIDDIRMGCLASCKNLMSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKC 180
Query: 181 NHIVGSDKWLEYIGSAGSLEELVVKNCKRISQYDLLKFGPGWMKLKKFEFKFKRSFNTYE 240
NHIVGSDKWLEYIGSAGSLEELVVKNCKRISQYDLLKFGPGWMKLKKFEFKFKRSFNTYE
Sbjct: 181 NHIVGSDKWLEYIGSAGSLEELVVKNCKRISQYDLLKFGPGWMKLKKFEFKFKRSFNTYE 240
Query: 241 PRDPCYVDNYQYGYDFCCESLRDVTLATIVTKPEIGLRCLLTKCKALERLCLHYVIGISD 300
PRDPCYVDNYQYGYDFCCESLRDVTLATIVTKPEIGLRCLLTKCKALERLCLHYVIGISD
Sbjct: 241 PRDPCYVDNYQYGYDFCCESLRDVTLATIVTKPEIGLRCLLTKCKALERLCLHYVIGISD 300
Query: 301 HDIITISQNCSNLRSISLSQEMLLCEIPGGTGVMARTPLTDDSLNALALRSHMLEAVELM 360
HDIITISQNCSNLRSISLSQEMLLCEIPGGTGVMARTPLTDDSLNALALRSHMLEAVELM
Sbjct: 301 HDIITISQNCSNLRSISLSQEMLLCEIPGGTGVMARTPLTDDSLNALALRSHMLEAVELM 360
Query: 361 FYGCAPDWPSEIAFTQDGLVTLLQSCPIRHLVLRGANFFDDEGMEALSCAQFLETLELMQ 420
FYGCAPDWPSEIAFTQDGLVTLLQSCPIRHLVLRGANFFDDEGMEALSCAQFLETLELMQ
Sbjct: 361 FYGCAPDWPSEIAFTQDGLVTLLQSCPIRHLVLRGANFFDDEGMEALSCAQFLETLELMQ 420
Query: 421 CVAVTDVGMRFLAQSPCLKNLTLQMCYEVTDDGVCEVAHARDLESLTVESCNQISVEALH 480
CVAVTDVGMRFLAQSPCLKNLTLQMCYEVTDDGVCEVAHARDLESLTVESCNQISVEALH
Sbjct: 421 CVAVTDVGMRFLAQSPCLKNLTLQMCYEVTDDGVCEVAHARDLESLTVESCNQISVEALH 480
Query: 481 GAAKSVHYKVDCPSYYDRYKD 501
GAAKSVHYKVDCPSYYDRYKD
Sbjct: 481 GAAKSVHYKVDCPSYYDRYKD 501
>Os12g0517000 Cyclin-like F-box domain containing protein
Length = 482
Score = 490 bits (1262), Expect = e-139, Method: Compositional matrix adjust.
Identities = 276/473 (58%), Positives = 332/473 (70%), Gaps = 12/473 (2%)
Query: 31 LEDLPDALLAEIVKRITNTSDLKSISLVSKRLYTIEAEQRSSIRVGSDLCPAIDALSALC 90
+EDLP A LAEI+KRIT TSDL S+SLVSKRLYTI+AE RS+IRVG L PA +AL LC
Sbjct: 1 MEDLPGAALAEIMKRITRTSDLSSLSLVSKRLYTIDAEHRSTIRVGRGLWPAKEALLTLC 60
Query: 91 SRFPNLLEVEMDY-SGWKFHWNLLEKH---IFSLHFPVLRDLTL----YIDDIRMGCLAS 142
SRF NL +VE++Y + N ++ S P+L DL L YIDD + L
Sbjct: 61 SRFSNLRKVEINYHDSTRGDGNQIDNQGLLTLSTCCPLLTDLILSFCYYIDDSGLAYLTD 120
Query: 143 CKNLMSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKCNHIVGSDKWLEYIGSAGSLEEL 202
CK L+SLRLNS I S GLL VA+GCKNL+ LH+I CN I G+ +WL+Y+GS GSLEEL
Sbjct: 121 CKKLVSLRLNSAKNITSSGLLVVAIGCKNLSGLHLINCNKISGNPEWLKYLGSDGSLEEL 180
Query: 203 VVKNCKRISQYDLLKFGPGWMKLKKFEFKFKRSFNTYEPRDPCYVDNYQYGYDFCCESLR 262
VVKNC ISQYDLL FGPGWMKL++F F+ +N RDP +V NYQ YDFCCESL+
Sbjct: 181 VVKNCGGISQYDLLLFGPGWMKLERFVFEVSNLYNILRLRDPSFVANYQRSYDFCCESLK 240
Query: 263 DVTLATIVTKPEIGLRCLLTKCKALERLCLHYVIGISDHDIITISQNCSNLRSISLSQEM 322
D+ L I T EIGLR LL KCK+L+ LCLH+V+G++D D+IT+SQNCSNL+SISL E
Sbjct: 241 DLRLRGIATVEEIGLRSLLGKCKSLQILCLHFVLGLTDSDMITLSQNCSNLKSISLQLEP 300
Query: 323 LLCEIPGGTGVMARTPLTDDSLNALALRSHMLEAVELMFYGCAPDWPSEIAFTQDGLVTL 382
++ P G + R PLTD SL ALAL ML+ VEL Y +P EI F+Q+GL TL
Sbjct: 301 VVGVGPQGR--VFRMPLTDVSLKALALGCRMLQIVELAVYSRHTSYP-EIGFSQEGLATL 357
Query: 383 LQSCPIRHLVLRGANFFDDEGMEALSCAQFLETLELMQCVAVTDVGMRFLAQSPCLKNLT 442
QSCPIR LVL GAN FDDE M+ALS AQFLETL+LM C +TD GMR LA S L NLT
Sbjct: 358 FQSCPIRELVLCGANIFDDEVMKALSSAQFLETLKLMDCKRITDAGMRLLANSSSLVNLT 417
Query: 443 LQMCYEVTDDGVCEVAHARDLESLTVESCNQISVEALHGAAKSVHYKVDCPSY 495
LQ C TDDGV EV AR+L+SL V+ C ++S +A+ GAAKSV Y +CP Y
Sbjct: 418 LQDCRGFTDDGVSEVVRARNLDSLIVQGC-RVSWKAVKGAAKSVRYDRNCPVY 469
>Os04g0370600 4Fe-4S ferredoxin, iron-sulfur binding domain containing protein
Length = 479
Score = 457 bits (1176), Expect = e-129, Method: Compositional matrix adjust.
Identities = 253/483 (52%), Positives = 330/483 (68%), Gaps = 21/483 (4%)
Query: 31 LEDLPDALLAEIVKRITNTSDLKSISLVSKRLYTIEAEQRSSIRVGSDLCPAIDALSALC 90
+E L + L+ EI+KRIT TSDL S+SLVSK+LY I+AEQR++I +G L + + SALC
Sbjct: 1 MEHLSEELIIEILKRITRTSDLNSVSLVSKQLYAIDAEQRATICIGCGL--STEDFSALC 58
Query: 91 SRFPNLLEVEMDYSGWK----FHWNLLEKHIFSLHFPVLRDLTL----YIDDIRMGCLAS 142
SRFPNLL+VE+DYSG H + + + +L D+TL I+D + CL
Sbjct: 59 SRFPNLLKVEIDYSGSTPGNGNHIDNQGLFVLTSCCTLLNDITLSFCSKINDAGIACLTY 118
Query: 143 CKNLMSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKCNHIVGSDKWLEYIGSAGSLEEL 202
CK LMSL+LNS+ + S GLL VA GCK L+SL++ C I GS +WLEY+GS GSLEEL
Sbjct: 119 CKKLMSLKLNSIPEVTSSGLLMVAFGCKALSSLYLNDCKGIAGSTEWLEYLGSDGSLEEL 178
Query: 203 VVKNCKRISQYDLLKFGPGWMKLKKFEFKFKRSFNTYEPRDPCYVDNYQYGYDFCCESLR 262
+V NCK +SQY+ LKFGPGWMKLK FE++ K +F + PR V + Y+ CCE+L+
Sbjct: 179 IVSNCKGVSQYNFLKFGPGWMKLKTFEYENKENFFSIHPRYGSSVKANTHRYELCCENLK 238
Query: 263 DVTLATIVTKP---EIGLRCLLTKCKALERLCLHYVIGISDHDIITISQNCSNLRSISL- 318
D+ L +VT+P EIGLR LL KCKALE+LCL YV G+ D+D+I +SQ C NL+SISL
Sbjct: 239 DLKLVRLVTEPDGPEIGLRFLLGKCKALEKLCLEYVTGVIDNDMIVLSQACKNLKSISLW 298
Query: 319 -SQEMLLCEIPGGTGVMARTPLTDDSLNALALRSHMLEAVELMFYGCAPDWPSEIAFTQD 377
E + G + RT TD+SL ALAL +L+ VEL F GCA P EI FTQ+
Sbjct: 299 LKPEHYVV----GGHIEFRTGFTDESLKALALNCPLLQDVELTFTGCAHWDPPEIGFTQE 354
Query: 378 GLVTLLQSCPIRHLVLRGANFFDDEGMEALSCAQFLETLELMQCVAVTDVGMRFLAQSPC 437
GLV+ ++SCPIR LVL GA FF+++GM+ALS AQFLETL L+ C VTD GMRF+ P
Sbjct: 355 GLVSFVESCPIRVLVLNGALFFNNKGMKALSSAQFLETLSLIDCNEVTDHGMRFIVHFPS 414
Query: 438 LKNLTLQMCYEVTDDGVCEVAHARDLESLTVESCNQISVEALHGAAKSVHYKVDCPS--Y 495
L NLTL+ C+ VT+ G+ E+AHA+ L+SL V C IS + + GAAKSV+Y+V+C S +
Sbjct: 415 LINLTLRFCHNVTNAGLSELAHAQKLQSLDVGGCGYISQKGVLGAAKSVYYEVNCKSLGH 474
Query: 496 YDR 498
Y R
Sbjct: 475 YKR 477
>Os12g0516900 Cyclin-like F-box domain containing protein
Length = 390
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/394 (59%), Positives = 296/394 (75%), Gaps = 12/394 (3%)
Query: 31 LEDLPDALLAEIVKRITNTSDLKSISLVSKRLYTIEAEQRSSIRVGSDLCPAIDALSALC 90
+EDLPDAL+ EIVKR+++TSDL S+SLVSKRLY IEAE R +I + L PA DA+ +LC
Sbjct: 1 MEDLPDALIGEIVKRVSSTSDLSSLSLVSKRLYKIEAESRHTIHISCSLGPATDAIVSLC 60
Query: 91 SRFPNLLEVEMDYSGW-KFHWNLLEKH---IFSLHFPVLRDLTL----YIDDIRMGCLAS 142
SRF NLL+V+++YSGW + H N L+ H I S + L D+TL YIDD +G LA
Sbjct: 61 SRFHNLLKVDINYSGWTQDHGNQLDNHGLRILSSYCLSLSDITLSFCSYIDDTGLGYLAF 120
Query: 143 CKNLMSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKCNHIVGSDKWLEYIGSAGSLEEL 202
CK L++LRLNS + I S GLL+VAVGCKNL++LH+I CN I G+ +WL+Y+GS GSLEEL
Sbjct: 121 CKKLITLRLNSATKITSSGLLAVAVGCKNLSALHLIDCNKISGAFEWLKYLGSDGSLEEL 180
Query: 203 VVKNCKRISQYDLLKFGPGWMKLKKFEFKFKRSFNTYEPRDPCYVDNYQYGYDFCCESLR 262
VKNC I+QY LL FGPGWMKL++F F+F+ ++ +E +DP YV N QY YDF CE+L+
Sbjct: 181 KVKNCVGINQYSLLMFGPGWMKLQRFVFEFRNIYSIFESKDPSYVANCQYRYDFSCENLK 240
Query: 263 DVTLATIVTKPEIGLRCLLTKCKALERLCLHYVIGISDHDIITISQNCSNLRSISLSQEM 322
++L IVT EIGLR LL KCK+LE+LCLH+V+G++D D+IT++QNCSNLRSISL E
Sbjct: 241 QLSLRRIVTMEEIGLRSLLGKCKSLEKLCLHFVLGLTDSDMITLAQNCSNLRSISLQLEP 300
Query: 323 LLCEIPGGTGVMARTPLTDDSLNALALRSHMLEAVELMFYGCAPDWPSEIAFTQDGLVTL 382
+ CE P G + RTPLTD+SL ALA ML+ VEL +GC +P EI FTQ+GL+
Sbjct: 301 VFCEGP--EGRVCRTPLTDESLKALA-GCRMLQVVELTMFGCDYAYP-EIGFTQEGLMMF 356
Query: 383 LQSCPIRHLVLRGANFFDDEGMEALSCAQFLETL 416
QSCPIR LVL GAN FDDEGM+ALS AQFL+TL
Sbjct: 357 FQSCPIRDLVLCGANIFDDEGMKALSSAQFLQTL 390
>Os04g0370500 Leucine-rich repeat, cysteine-containing containing protein
Length = 480
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/479 (49%), Positives = 300/479 (62%), Gaps = 35/479 (7%)
Query: 31 LEDLPDALLAEIVKRITNTSDLKSISLVSKRLYTIEAEQRSSIRVGSDLCPAIDALSALC 90
+E L + L+ EI+KRIT TSDL S+SLVSK+LY I+AEQR++I + L + + SALC
Sbjct: 1 MERLSEELIIEILKRITRTSDLNSLSLVSKQLYAIDAEQRATICIDCGL--STEDFSALC 58
Query: 91 SRFPNLLEVEMDYSGWK----FHWNLLEKHIFSLHFPVLRDLTL----YIDDIRMGCLAS 142
SRFPNLL+VE+ SG H + + S L DLTL I+D + L
Sbjct: 59 SRFPNLLKVEIGNSGSTPGNGNHIDNQGLFVLSSSCNSLNDLTLSFCSKINDAGIASLTY 118
Query: 143 CKNLMSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKCNHIVGSDKWLEYIGSAGSLEEL 202
CK LMSL+LNS+ + S GLL VA GCK L+SL++ C I S +WLEY+GS GSLEEL
Sbjct: 119 CKKLMSLKLNSIPDVTSSGLLLVAFGCKALSSLYLNDCKGIAASTEWLEYLGSDGSLEEL 178
Query: 203 VVKNCKRISQYDLLKFGPGWMKLKKFEFKFKRSF-NTYEPR-DPCYVDNYQYGYDFCCES 260
VV NC ISQYD LKFG GWMKLKKF F K + N + R DP Y N Y YD CCE+
Sbjct: 179 VVNNCPGISQYDFLKFGRGWMKLKKFVFVNKETMVNHFITRHDPSYNANCVYKYDLCCEN 238
Query: 261 LRDVTLATIVTKPE---IGLRCLLTKCKALERLCLHYVIGISDHDIITISQNCSNLRSIS 317
L D+ LA + T+PE IGLR LL KCKALE+LCL YV G+ D D+I +SQ+C NL+SIS
Sbjct: 239 LEDLRLARLRTEPEGPEIGLRFLLRKCKALEKLCLEYVGGLIDKDMIVLSQSCKNLKSIS 298
Query: 318 L--------SQEMLLCEIPGGTGVMARTPLTDDSLNALALRSHMLEAVELMFYGCAPDWP 369
L E+L R TD+SL LA +L+ +EL F G
Sbjct: 299 LWMMPRRFHEHEVL------------RMGFTDESLEMLAHNCPLLQDLELTFAGVEDLEY 346
Query: 370 SEIAFTQDGLVTLLQSCPIRHLVLRGANFFDDEGMEALSCAQFLETLELMQCVAVTDVGM 429
EI FTQ+GLV L+ SCPIR L L G FF+D+GM+ LS A FL+TL L+ C +TD GM
Sbjct: 347 PEIGFTQEGLVKLMHSCPIRSLTLNGTLFFNDKGMKGLSSAPFLKTLRLVDCKKITDYGM 406
Query: 430 RFLAQSPCLKNLTLQMCYEVTDDGVCEVAHARDLESLTVESCNQISVEALHGAAKSVHY 488
FL PCL +L LQ C +TD G+ E+ HA+ L+SL VE C+ IS A+ G+A+SV Y
Sbjct: 407 CFLVHYPCLADLKLQYCSGLTDVGIAELVHAQKLQSLVVEGCSNISEHAVQGSARSVQY 465
>Os04g0371600 Leucine-rich repeat, cysteine-containing containing protein
Length = 300
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 150/296 (50%), Positives = 195/296 (65%), Gaps = 18/296 (6%)
Query: 73 IRVGSDLCPAIDALSALCSRFPNLLEVEMDYSGWK-FHWNLLEKH---IFSLHFPVLRDL 128
I VGS L AI+AL AL S+FPNL +VE++YSGW + + ++ + S P+L DL
Sbjct: 8 ICVGSGL--AIEALPALFSQFPNLHKVEINYSGWAPGNGSQIDNQGLRVLSFSLPLLNDL 65
Query: 129 TLY----IDDIRMGCLASCKNLMSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKCNHIV 184
TL I+D + CL +CK LMSL+LNS I S GLLS+AVGCK L+SLH+ C I
Sbjct: 66 TLSFCSEINDSGLACLTNCKMLMSLKLNSTPEITSRGLLSLAVGCKTLSSLHLNNCKGIT 125
Query: 185 GSDKWLEYIGSAGSLEELVVKNCKRISQYDLLKFGPGWMKLKKFEFKFKRSFNTY--EPR 242
S +WLE++G+ GSLEELVVKNCK I QY L FGPGWMKL+KFEF+ ++SF + R
Sbjct: 126 SSTEWLEHLGTNGSLEELVVKNCKGIGQYHFLMFGPGWMKLQKFEFENEQSFWSIFRRDR 185
Query: 243 DPCYVDNYQYGYDFCCESLRDVTLATIVTK---PEIGLRCLLTKCKALERLCLHYVIGIS 299
DP Y + Y YD CE L+D+ L IVT+ PEIGLR LL KC++LE+L L YV G+
Sbjct: 186 DPSY-KAHTYRYDLLCEGLKDLRLVHIVTEPKGPEIGLRFLLGKCRSLEKLSLEYVSGLI 244
Query: 300 DHDIITISQNCSNLRSISLSQEMLLCEIPGGTGVMARTPLTDDSLNALALRSHMLE 355
D+D+I +SQ C NL+SISL + + G ++ RT TD+SL ALAL L+
Sbjct: 245 DNDMIALSQTCKNLKSISLWLKPEHYNV--GDDIIFRTGFTDESLKALALNCPFLQ 298
>Os12g0526600 Cyclin-like F-box domain containing protein
Length = 203
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 154/203 (75%), Gaps = 8/203 (3%)
Query: 31 LEDLPDALLAEIVKRITNTSDLKSISLVSKRLYTIEAEQRSSIRVGSDLCPAIDALSALC 90
+E LPDAL+ EIVKRI +TSDL S+SLVSKRLY IEAE R SIR+G +L PA DA+ +LC
Sbjct: 1 MEGLPDALIGEIVKRIESTSDLSSLSLVSKRLYKIEAEHRHSIRIGHNLPPATDAIISLC 60
Query: 91 SRFPNLLEVEMDYSGW-KFHWNLLEKH---IFSLHFPVLRDLTL----YIDDIRMGCLAS 142
SRF NL V+++YSGW + H N L+ H I S + L D+TL YIDD +G LA
Sbjct: 61 SRFHNLFNVDINYSGWTQGHGNQLDNHGLHILSSYCLSLSDITLSFCSYIDDTGLGYLAF 120
Query: 143 CKNLMSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKCNHIVGSDKWLEYIGSAGSLEEL 202
CK LM+LRLNS I S GLL+VAVGCKNL+++H+I CN I G+ +WL+Y+GS GSLEEL
Sbjct: 121 CKKLMTLRLNSAKRITSSGLLAVAVGCKNLSAIHLINCNKISGTFEWLKYLGSDGSLEEL 180
Query: 203 VVKNCKRISQYDLLKFGPGWMKL 225
VVKNC+RISQ+ LL FGPGWMKL
Sbjct: 181 VVKNCERISQFSLLLFGPGWMKL 203
>Os02g0798900 Conserved hypothetical protein
Length = 207
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 136/197 (69%), Gaps = 9/197 (4%)
Query: 31 LEDLPDALLAEIVKRITNTSDLKSISLVSKRLYTIEAEQRSSIRVGSDLCPAIDALSALC 90
+++L + LLAEI+KRI TSD S+SLVSK+LYTI+AEQR +I VG L PA +AL++LC
Sbjct: 1 MDNLSEPLLAEIIKRIAKTSDRNSLSLVSKQLYTIDAEQRDAIHVGCGLHPATEALASLC 60
Query: 91 SRFPNLLEVEMDYSGW-KFHWNLLEKH---IFSLHFPVLRDLTL----YIDDIRMGCLAS 142
SRFPNL +V +DYSGW H L+ + S H L DLTL YIDD +G LA
Sbjct: 61 SRFPNLWKVVIDYSGWISIHGKQLDNQGLLVLSSHCSSLTDLTLNFCSYIDDSGIGYLAY 120
Query: 143 CKNLMSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKCNHIVGSDKWLEYIGSAGSLEEL 202
CK L S RLN AI S GLLSVAVGCK+L + H++ C VGS +WLEY+G AGSLEEL
Sbjct: 121 CKKLRSFRLNFAPAISSRGLLSVAVGCKSLCTFHLVDCMK-VGSVEWLEYLGRAGSLEEL 179
Query: 203 VVKNCKRISQYDLLKFG 219
VVK+CK ++ L+ G
Sbjct: 180 VVKDCKCRNKSWLVGLG 196
>Os04g0370300 Conserved hypothetical protein
Length = 192
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 132/194 (68%), Gaps = 10/194 (5%)
Query: 31 LEDLPDALLAEIVKRITNTSDLKSISLVSKRLYTIEAEQRSSIRVGSDLCPAIDALSALC 90
+E L + L+ EI+K+IT TSDL S+SLVSK+LYTI+AEQR++IR+G L A + ALC
Sbjct: 1 MEHLSEELIIEILKKITRTSDLNSLSLVSKQLYTIDAEQRAAIRLGCGL--ATEDFLALC 58
Query: 91 SRFPNLLEVEMDYSGWK----FHWNLLEKHIFSLHFPVLRDLTLY----IDDIRMGCLAS 142
SRFPNLL+VE+DYSG H + + S +L D+TL I+D + CL+
Sbjct: 59 SRFPNLLKVEIDYSGSTPGNGNHIDNQGLFVLSSCCTLLNDITLTFCSKINDAGIVCLSY 118
Query: 143 CKNLMSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKCNHIVGSDKWLEYIGSAGSLEEL 202
CK L+SL+LNS+ + S GLL + GCK L+SL I C I GS +WLEY+G+ GSLEEL
Sbjct: 119 CKKLISLKLNSLPEVTSSGLLMLFFGCKALSSLFINDCKGIAGSTEWLEYLGTDGSLEEL 178
Query: 203 VVKNCKRISQYDLL 216
VV NC+ ISQYD L
Sbjct: 179 VVNNCQEISQYDFL 192
>Os04g0370800
Length = 164
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/151 (58%), Positives = 110/151 (72%), Gaps = 6/151 (3%)
Query: 147 MSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKCNHIVGSDKWLEYIGSAGSLEELVVKN 206
MSLRLNS+ + S GLL +AVGCK L+S+++ C I GS +WLE++G+ GSLEEL VKN
Sbjct: 1 MSLRLNSIPELTSSGLLLLAVGCKALSSVYLNDCKGIAGSTEWLEHLGANGSLEELAVKN 60
Query: 207 CKRISQYDLLKFGPGWMKLKKFEFKFKRSFNTYEPR--DPCYVDNYQYGYDFCCESLRDV 264
CK I QY LKFG GWMKL+KFEF+ ++ F ++ R DP Y + Y YD CESL+D+
Sbjct: 61 CKGIGQYHFLKFGSGWMKLRKFEFENEQGFWSFFHRDWDPSYKAD-TYRYDLLCESLKDL 119
Query: 265 TLATIVTK---PEIGLRCLLTKCKALERLCL 292
LA +VT+ PEIGLR LL KCKALERLCL
Sbjct: 120 RLAHLVTEPEGPEIGLRFLLGKCKALERLCL 150
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.137 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,100,557
Number of extensions: 631054
Number of successful extensions: 2165
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 2120
Number of HSP's successfully gapped: 10
Length of query: 501
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 396
Effective length of database: 11,553,331
Effective search space: 4575119076
Effective search space used: 4575119076
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 158 (65.5 bits)