Os12g0517100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0517100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 258.2 | 0.755 | 5.12 | 1.72 | 2.07 | 2.23 | 1.04 | -1.3 | 0.456 | 19.2 | 24.26 | 216 | -- | -- |
| 258.8 | 0.749 | 5.1 | 1.89 | 2.09 | 2.12 | 0.913 | -- | 0.501 | 19.2 | 24.16 | 207 | -- | -- |
| 260.78 | 0.752 | 5.11 | 1.8 | 2.07 | 2.18 | -- | -0.604 | 0.475 | 19.1 | 24.27 | 224 | -- | -- |
| 260.89 | 0.752 | 5.1 | 1.88 | 2.07 | 2.13 | -- | -- | 0.506 | 19.1 | 24.23 | 225 | -- | -- |
| 394.36 | 0.925 | 5.07 | 1.6 | -- | 3.61 | -- | 0.346 | 0.391 | -- | 24.5 | 391 | -- | -- |
| 331.42 | 0.853 | 5.07 | 2.27 | 2.9 | -- | 1.52 | -- | 0.733 | 18.4 | -- | -- | -- | -- |
| 337.08 | 0.86 | 5.06 | 2.26 | 2.91 | -- | -- | -- | 0.739 | 18.3 | -- | -- | -- | -- |
| 393.1 | 0.923 | 5.08 | 1.58 | -- | 3.62 | -- | -- | 0.357 | -- | 24.5 | 393 | -- | -- |
| 347.96 | 0.869 | 5.17 | -- | 1.94 | 2.62 | -- | -- | 0.19 | 19.4 | 23.5 | 216 | -- | -- |
| 775.36 | 1.3 | 5.01 | 2.18 | -- | -- | -- | -- | 0.676 | -- | -- | -- | -- | -- |
| 471.21 | 1.02 | 5.12 | -- | 2.87 | -- | -- | -- | 0.488 | 18.4 | -- | -- | -- | -- |
| 456.46 | 0.995 | 5.13 | -- | -- | 3.86 | -- | -- | 0.137 | -- | 24.34 | 399 | -- | -- |
| 900.56 | 1.4 | 5.06 | -- | -- | -- | -- | -- | 0.435 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 254.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 4 |
| 2 | 255.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 11 |
| 3 | 255.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 6 |
| 4 | 255.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 8 |
| 5 | 255.91 | temperature | 20 | 270 | > th | dose dependent | rect. | 8 | 15 |
| 18 | 257.99 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 26 | 258.68 | temperature | 25 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 84 | 259.70 | temperature | 20 | 30 | > th | dose dependent | sin | 20 | NA |
| 92 | 259.74 | temperature | 30 | 270 | < th | dose dependent | sin | 22 | NA |
| 95 | 259.78 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 139 | 260.67 | temperature | 10 | 30 | > th | dose dependent | sin | 20 | NA |
| 388 | 264.15 | temperature | 25 | 720 | > th | dose dependent | sin | 3 | NA |
| 404 | 264.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 12 |
| 775 | 268.39 | temperature | 25 | 90 | < th | dose independent | rect. | 10 | 13 |
| 887 | 269.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 8 | 14 |