Os12g0517000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os12g0517000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.02 | 0.215 | 3.15 | 0.16 | 0.13 | 0.224 | -0.0157 | 0.972 | -0.0492 | 7.44 | 91 | 5914 | -- | -- |
| 22.35 | 0.22 | 3.14 | 0.11 | 0.148 | 0.273 | -0.00979 | -- | -0.0668 | 7.84 | 97 | 6639 | -- | -- |
| 21.03 | 0.214 | 3.15 | 0.159 | 0.13 | 0.224 | -- | 0.972 | -0.0491 | 7.47 | 91 | 5913 | -- | -- |
| 22.33 | 0.22 | 3.15 | 0.109 | 0.127 | 0.241 | -- | -- | -0.0713 | 7.36 | 93 | 7272 | -- | -- |
| 21.91 | 0.218 | 3.15 | 0.161 | -- | 0.225 | -- | 0.961 | -0.0472 | -- | 91 | 5850 | -- | -- |
| 23.2 | 0.226 | 3.13 | 0.0773 | 0.128 | -- | -0.0308 | -- | -0.0185 | 7.37 | -- | -- | -- | -- |
| 23.2 | 0.226 | 3.13 | 0.0767 | 0.128 | -- | -- | -- | -0.0184 | 7.44 | -- | -- | -- | -- |
| 23.17 | 0.224 | 3.15 | 0.107 | -- | 0.249 | -- | -- | -0.066 | -- | 92 | 7134 | -- | -- |
| 22.63 | 0.222 | 3.15 | -- | 0.126 | 0.226 | -- | -- | -0.0767 | 7.57 | 97.01 | 7109 | -- | -- |
| 24.07 | 0.229 | 3.14 | 0.0787 | -- | -- | -- | -- | -0.0163 | -- | -- | -- | -- | -- |
| 23.36 | 0.226 | 3.14 | -- | 0.128 | -- | -- | -- | -0.0269 | 7.4 | -- | -- | -- | -- |
| 23.48 | 0.226 | 3.15 | -- | -- | 0.227 | -- | -- | -0.0753 | -- | 92.2 | 7143 | -- | -- |
| 24.23 | 0.23 | 3.14 | -- | -- | -- | -- | -- | -0.0251 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.77 | humidity | 80 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 4 | 20.81 | humidity | 80 | 14400 | < th | dose dependent | rect. | 21 | 13 |
| 12 | 20.90 | humidity | 70 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 13 | 20.91 | humidity | 70 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 26 | 20.93 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 28 | 20.95 | humidity | 70 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 64 | 21.20 | humidity | 80 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 65 | 21.20 | humidity | 70 | 4320 | > th | dose dependent | rect. | 4 | 7 |
| 78 | 21.21 | humidity | 80 | 14400 | < th | dose dependent | sin | 8 | NA |
| 90 | 21.23 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 102 | 21.25 | humidity | 70 | 4320 | > th | dose independent | rect. | 8 | 7 |
| 103 | 21.25 | humidity | 70 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 107 | 21.26 | humidity | 60 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 123 | 21.26 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 3 | 23 |
| 125 | 21.26 | humidity | 50 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 174 | 21.28 | humidity | 70 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 180 | 21.28 | humidity | 50 | 4320 | > th | dose dependent | rect. | 23 | 16 |
| 182 | 21.29 | humidity | 70 | 4320 | > th | dose independent | sin | 1 | NA |
| 251 | 21.30 | humidity | 70 | 4320 | < th | dose independent | rect. | 8 | 7 |
| 256 | 21.30 | humidity | 50 | 4320 | > th | dose dependent | sin | 4 | NA |
| 281 | 21.31 | humidity | 50 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 296 | 21.32 | wind | 3 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 333 | 21.32 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 341 | 21.32 | humidity | 90 | 4320 | < th | dose dependent | rect. | 23 | 17 |
| 345 | 21.33 | humidity | 60 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 401 | 21.34 | humidity | 70 | 4320 | < th | dose independent | sin | 2 | NA |
| 430 | 21.34 | humidity | 90 | 4320 | < th | dose dependent | rect. | 4 | 12 |
| 492 | 21.36 | humidity | 90 | 90 | < th | dose independent | rect. | 2 | 3 |
| 507 | 21.36 | humidity | 70 | 4320 | > th | dose independent | rect. | 8 | 21 |
| 538 | 21.37 | humidity | 70 | 4320 | > th | dose independent | no | NA | NA |
| 603 | 21.37 | humidity | 70 | 4320 | > th | dose independent | rect. | 16 | 23 |
| 663 | 21.38 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 23 |
| 664 | 21.38 | humidity | 70 | 4320 | > th | dose independent | rect. | 13 | 23 |
| 667 | 21.38 | humidity | 90 | 4320 | < th | dose dependent | sin | 4 | NA |
| 674 | 21.38 | humidity | 80 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 681 | 21.38 | humidity | 90 | 4320 | < th | dose dependent | rect. | 10 | 5 |
| 705 | 21.39 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 747 | 21.39 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 2 | 2 |
| 799 | 21.40 | atmosphere | 995 | 720 | > th | dose independent | rect. | 23 | 16 |
| 844 | 21.41 | humidity | 70 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 847 | 21.41 | humidity | 70 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 848 | 21.41 | humidity | 70 | 4320 | > th | dose independent | rect. | 14 | 4 |
| 898 | 21.42 | humidity | 70 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 955 | 21.43 | humidity | 70 | 4320 | < th | dose independent | no | NA | NA |
| 957 | 21.43 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 3 |