BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0517000 Os12g0517000|Os12g0517000
(482 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0517000 Cyclin-like F-box domain containing protein 924 0.0
Os12g0516900 Cyclin-like F-box domain containing protein 524 e-149
Os12g0517100 Cyclin-like F-box domain containing protein 486 e-137
Os04g0370600 4Fe-4S ferredoxin, iron-sulfur binding domain ... 473 e-133
Os04g0370500 Leucine-rich repeat, cysteine-containing conta... 453 e-127
Os04g0371600 Leucine-rich repeat, cysteine-containing conta... 285 5e-77
Os12g0526600 Cyclin-like F-box domain containing protein 248 9e-66
Os04g0370300 Conserved hypothetical protein 211 1e-54
Os02g0798900 Conserved hypothetical protein 196 2e-50
Os04g0370800 154 1e-37
>Os12g0517000 Cyclin-like F-box domain containing protein
Length = 482
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/482 (97%), Positives = 468/482 (97%)
Query: 1 MEDLPGAALAEIMKRITRTSDLSSLSLVSKRLYTIDAEHRSTIRVGRGLWPAKEALLTLC 60
MEDLPGAALAEIMKRITRTSDLSSLSLVSKRLYTIDAEHRSTIRVGRGLWPAKEALLTLC
Sbjct: 1 MEDLPGAALAEIMKRITRTSDLSSLSLVSKRLYTIDAEHRSTIRVGRGLWPAKEALLTLC 60
Query: 61 SRFSNLRKVEINYHDSTRGDGNQIDNQGXXXXXXXXXXXXXXILSFCYYIDDSGLAYLTD 120
SRFSNLRKVEINYHDSTRGDGNQIDNQG ILSFCYYIDDSGLAYLTD
Sbjct: 61 SRFSNLRKVEINYHDSTRGDGNQIDNQGLLTLSTCCPLLTDLILSFCYYIDDSGLAYLTD 120
Query: 121 CKKLVSLRLNSAKNITSSGLLVVAIGCKNLSGLHLINCNKISGNPEWLKYLGSDGSLEEL 180
CKKLVSLRLNSAKNITSSGLLVVAIGCKNLSGLHLINCNKISGNPEWLKYLGSDGSLEEL
Sbjct: 121 CKKLVSLRLNSAKNITSSGLLVVAIGCKNLSGLHLINCNKISGNPEWLKYLGSDGSLEEL 180
Query: 181 VVKNCGGISQYDLLLFGPGWMKLERFVFEVSNLYNILRLRDPSFVANYQRSYDFCCESLK 240
VVKNCGGISQYDLLLFGPGWMKLERFVFEVSNLYNILRLRDPSFVANYQRSYDFCCESLK
Sbjct: 181 VVKNCGGISQYDLLLFGPGWMKLERFVFEVSNLYNILRLRDPSFVANYQRSYDFCCESLK 240
Query: 241 DLRLRGIATVEEIGLRSLLGKCKSLQILCLHFVLGLTDSDMITLSQNCSNLKSISLQLEP 300
DLRLRGIATVEEIGLRSLLGKCKSLQILCLHFVLGLTDSDMITLSQNCSNLKSISLQLEP
Sbjct: 241 DLRLRGIATVEEIGLRSLLGKCKSLQILCLHFVLGLTDSDMITLSQNCSNLKSISLQLEP 300
Query: 301 VVGVGPQGRVFRMPLTDVSLKALALGCRMLQIVELAVYSRHTSYPEIGFSQEGLATLFQS 360
VVGVGPQGRVFRMPLTDVSLKALALGCRMLQIVELAVYSRHTSYPEIGFSQEGLATLFQS
Sbjct: 301 VVGVGPQGRVFRMPLTDVSLKALALGCRMLQIVELAVYSRHTSYPEIGFSQEGLATLFQS 360
Query: 361 CPIRELVLCGANIFDDEVMKALSSAQFLETLKLMDCKRITDAGMRLLANSSSLVNLTLQD 420
CPIRELVLCGANIFDDEVMKALSSAQFLETLKLMDCKRITDAGMRLLANSSSLVNLTLQD
Sbjct: 361 CPIRELVLCGANIFDDEVMKALSSAQFLETLKLMDCKRITDAGMRLLANSSSLVNLTLQD 420
Query: 421 CRGFTDDGVSEVVRARNLDSLIVQGCRVSWKAVKGAAKSVRYDRNCPVYGRLSRSSMIST 480
CRGFTDDGVSEVVRARNLDSLIVQGCRVSWKAVKGAAKSVRYDRNCPVYGRLSRSSMIST
Sbjct: 421 CRGFTDDGVSEVVRARNLDSLIVQGCRVSWKAVKGAAKSVRYDRNCPVYGRLSRSSMIST 480
Query: 481 LD 482
LD
Sbjct: 481 LD 482
>Os12g0516900 Cyclin-like F-box domain containing protein
Length = 390
Score = 524 bits (1349), Expect = e-149, Method: Compositional matrix adjust.
Identities = 274/391 (70%), Positives = 312/391 (79%), Gaps = 1/391 (0%)
Query: 1 MEDLPGAALAEIMKRITRTSDLSSLSLVSKRLYTIDAEHRSTIRVGRGLWPAKEALLTLC 60
MEDLP A + EI+KR++ TSDLSSLSLVSKRLY I+AE R TI + L PA +A+++LC
Sbjct: 1 MEDLPDALIGEIVKRVSSTSDLSSLSLVSKRLYKIEAESRHTIHISCSLGPATDAIVSLC 60
Query: 61 SRFSNLRKVEINYHDSTRGDGNQIDNQGXXXXXXXXXXXXXXILSFCYYIDDSGLAYLTD 120
SRF NL KV+INY T+ GNQ+DN G LSFC YIDD+GL YL
Sbjct: 61 SRFHNLLKVDINYSGWTQDHGNQLDNHGLRILSSYCLSLSDITLSFCSYIDDTGLGYLAF 120
Query: 121 CKKLVSLRLNSAKNITSSGLLVVAIGCKNLSGLHLINCNKISGNPEWLKYLGSDGSLEEL 180
CKKL++LRLNSA ITSSGLL VA+GCKNLS LHLI+CNKISG EWLKYLGSDGSLEEL
Sbjct: 121 CKKLITLRLNSATKITSSGLLAVAVGCKNLSALHLIDCNKISGAFEWLKYLGSDGSLEEL 180
Query: 181 VVKNCGGISQYDLLLFGPGWMKLERFVFEVSNLYNILRLRDPSFVANYQRSYDFCCESLK 240
VKNC GI+QY LL+FGPGWMKL+RFVFE N+Y+I +DPS+VAN Q YDF CE+LK
Sbjct: 181 KVKNCVGINQYSLLMFGPGWMKLQRFVFEFRNIYSIFESKDPSYVANCQYRYDFSCENLK 240
Query: 241 DLRLRGIATVEEIGLRSLLGKCKSLQILCLHFVLGLTDSDMITLSQNCSNLKSISLQLEP 300
L LR I T+EEIGLRSLLGKCKSL+ LCLHFVLGLTDSDMITL+QNCSNL+SISLQLEP
Sbjct: 241 QLSLRRIVTMEEIGLRSLLGKCKSLEKLCLHFVLGLTDSDMITLAQNCSNLRSISLQLEP 300
Query: 301 VVGVGPQGRVFRMPLTDVSLKALALGCRMLQIVELAVYSRHTSYPEIGFSQEGLATLFQS 360
V GP+GRV R PLTD SLKALA GCRMLQ+VEL ++ +YPEIGF+QEGL FQS
Sbjct: 301 VFCEGPEGRVCRTPLTDESLKALA-GCRMLQVVELTMFGCDYAYPEIGFTQEGLMMFFQS 359
Query: 361 CPIRELVLCGANIFDDEVMKALSSAQFLETL 391
CPIR+LVLCGANIFDDE MKALSSAQFL+TL
Sbjct: 360 CPIRDLVLCGANIFDDEGMKALSSAQFLQTL 390
>Os12g0517100 Cyclin-like F-box domain containing protein
Length = 501
Score = 486 bits (1252), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/473 (57%), Positives = 326/473 (68%), Gaps = 12/473 (2%)
Query: 1 MEDLPGAALAEIMKRITRTSDLSSLSLVSKRLYTIDAEHRSTIRVGRGLWPAKEALLTLC 60
+EDLP A LAEI+KRIT TSDL S+SLVSKRLYTI+AE RS+IRVG L PA +AL LC
Sbjct: 31 LEDLPDALLAEIVKRITNTSDLKSISLVSKRLYTIEAEQRSSIRVGSDLCPAIDALSALC 90
Query: 61 SRFSNLRKVEINYHDSTRGDGNQIDNQGXXXXXXXXXXXXXXILSFCYYIDDSGLAYLTD 120
SRF NL +VE++Y + N ++ + YIDD + L
Sbjct: 91 SRFPNLLEVEMDY-SGWKFHWNLLEKH-------IFSLHFPVLRDLTLYIDDIRMGCLAS 142
Query: 121 CKKLVSLRLNSAKNITSSGLLVVAIGCKNLSGLHLINCNKISGNPEWLKYLGSDGSLEEL 180
CK L+SLRLNS I S GLL VA+GCKNL+ LH+I CN I G+ +WL+Y+GS GSLEEL
Sbjct: 143 CKNLMSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKCNHIVGSDKWLEYIGSAGSLEEL 202
Query: 181 VVKNCGGISQYDLLLFGPGWMKLERFVFEVSNLYNILRLRDPSFVANYQRSYDFCCESLK 240
VVKNC ISQYDLL FGPGWMKL++F F+ +N RDP +V NYQ YDFCCESL+
Sbjct: 203 VVKNCKRISQYDLLKFGPGWMKLKKFEFKFKRSFNTYEPRDPCYVDNYQYGYDFCCESLR 262
Query: 241 DLRLRGIATVEEIGLRSLLGKCKSLQILCLHFVLGLTDSDMITLSQNCSNLKSISLQLEP 300
D+ L I T EIGLR LL KCK+L+ LCLH+V+G++D D+IT+SQNCSNL+SISL E
Sbjct: 263 DVTLATIVTKPEIGLRCLLTKCKALERLCLHYVIGISDHDIITISQNCSNLRSISLSQEM 322
Query: 301 VVGVGPQGR--VFRMPLTDVSLKALALGCRMLQIVELAVYSRHTSYP-EIGFSQEGLATL 357
++ P G + R PLTD SL ALAL ML+ VEL Y +P EI F+Q+GL TL
Sbjct: 323 LLCEIPGGTGVMARTPLTDDSLNALALRSHMLEAVELMFYGCAPDWPSEIAFTQDGLVTL 382
Query: 358 FQSCPIRELVLCGANIFDDEVMKALSSAQFLETLKLMDCKRITDAGMRLLANSSSLVNLT 417
QSCPIR LVL GAN FDDE M+ALS AQFLETL+LM C +TD GMR LA S L NLT
Sbjct: 383 LQSCPIRHLVLRGANFFDDEGMEALSCAQFLETLELMQCVAVTDVGMRFLAQSPCLKNLT 442
Query: 418 LQDCRGFTDDGVSEVVRARNLDSLIVQGC-RVSWKAVKGAAKSVRYDRNCPVY 469
LQ C TDDGV EV AR+L+SL V+ C ++S +A+ GAAKSV Y +CP Y
Sbjct: 443 LQMCYEVTDDGVCEVAHARDLESLTVESCNQISVEALHGAAKSVHYKVDCPSY 495
>Os04g0370600 4Fe-4S ferredoxin, iron-sulfur binding domain containing protein
Length = 479
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/480 (55%), Positives = 324/480 (67%), Gaps = 9/480 (1%)
Query: 1 MEDLPGAALAEIMKRITRTSDLSSLSLVSKRLYTIDAEHRSTIRVGRGLWPAKEALLTLC 60
ME L + EI+KRITRTSDL+S+SLVSK+LY IDAE R+TI +G GL + E LC
Sbjct: 1 MEHLSEELIIEILKRITRTSDLNSVSLVSKQLYAIDAEQRATICIGCGL--STEDFSALC 58
Query: 61 SRFSNLRKVEINYHDSTRGDGNQIDNQGXXXXXXXXXXXXXXILSFCYYIDDSGLAYLTD 120
SRF NL KVEI+Y ST G+GN IDNQG LSFC I+D+G+A LT
Sbjct: 59 SRFPNLLKVEIDYSGSTPGNGNHIDNQGLFVLTSCCTLLNDITLSFCSKINDAGIACLTY 118
Query: 121 CKKLVSLRLNSAKNITSSGLLVVAIGCKNLSGLHLINCNKISGNPEWLKYLGSDGSLEEL 180
CKKL+SL+LNS +TSSGLL+VA GCK LS L+L +C I+G+ EWL+YLGSDGSLEEL
Sbjct: 119 CKKLMSLKLNSIPEVTSSGLLMVAFGCKALSSLYLNDCKGIAGSTEWLEYLGSDGSLEEL 178
Query: 181 VVKNCGGISQYDLLLFGPGWMKLERFVFE-VSNLYNILRLRDPSFVANYQRSYDFCCESL 239
+V NC G+SQY+ L FGPGWMKL+ F +E N ++I S AN R Y+ CCE+L
Sbjct: 179 IVSNCKGVSQYNFLKFGPGWMKLKTFEYENKENFFSIHPRYGSSVKANTHR-YELCCENL 237
Query: 240 KDLRLRGIATV---EEIGLRSLLGKCKSLQILCLHFVLGLTDSDMITLSQNCSNLKSISL 296
KDL+L + T EIGLR LLGKCK+L+ LCL +V G+ D+DMI LSQ C NLKSISL
Sbjct: 238 KDLKLVRLVTEPDGPEIGLRFLLGKCKALEKLCLEYVTGVIDNDMIVLSQACKNLKSISL 297
Query: 297 QLEPVVGVGPQGRVFRMPLTDVSLKALALGCRMLQIVELAVYS-RHTSYPEIGFSQEGLA 355
L+P V FR TD SLKALAL C +LQ VEL H PEIGF+QEGL
Sbjct: 298 WLKPEHYVVGGHIEFRTGFTDESLKALALNCPLLQDVELTFTGCAHWDPPEIGFTQEGLV 357
Query: 356 TLFQSCPIRELVLCGANIFDDEVMKALSSAQFLETLKLMDCKRITDAGMRLLANSSSLVN 415
+ +SCPIR LVL GA F+++ MKALSSAQFLETL L+DC +TD GMR + + SL+N
Sbjct: 358 SFVESCPIRVLVLNGALFFNNKGMKALSSAQFLETLSLIDCNEVTDHGMRFIVHFPSLIN 417
Query: 416 LTLQDCRGFTDDGVSEVVRARNLDSLIVQGC-RVSWKAVKGAAKSVRYDRNCPVYGRLSR 474
LTL+ C T+ G+SE+ A+ L SL V GC +S K V GAAKSV Y+ NC G R
Sbjct: 418 LTLRFCHNVTNAGLSELAHAQKLQSLDVGGCGYISQKGVLGAAKSVYYEVNCKSLGHYKR 477
>Os04g0370500 Leucine-rich repeat, cysteine-containing containing protein
Length = 480
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 256/472 (54%), Positives = 317/472 (67%), Gaps = 11/472 (2%)
Query: 1 MEDLPGAALAEIMKRITRTSDLSSLSLVSKRLYTIDAEHRSTIRVGRGLWPAKEALLTLC 60
ME L + EI+KRITRTSDL+SLSLVSK+LY IDAE R+TI + GL + E LC
Sbjct: 1 MERLSEELIIEILKRITRTSDLNSLSLVSKQLYAIDAEQRATICIDCGL--STEDFSALC 58
Query: 61 SRFSNLRKVEINYHDSTRGDGNQIDNQGXXXXXXXXXXXXXXILSFCYYIDDSGLAYLTD 120
SRF NL KVEI ST G+GN IDNQG LSFC I+D+G+A LT
Sbjct: 59 SRFPNLLKVEIGNSGSTPGNGNHIDNQGLFVLSSSCNSLNDLTLSFCSKINDAGIASLTY 118
Query: 121 CKKLVSLRLNSAKNITSSGLLVVAIGCKNLSGLHLINCNKISGNPEWLKYLGSDGSLEEL 180
CKKL+SL+LNS ++TSSGLL+VA GCK LS L+L +C I+ + EWL+YLGSDGSLEEL
Sbjct: 119 CKKLMSLKLNSIPDVTSSGLLLVAFGCKALSSLYLNDCKGIAASTEWLEYLGSDGSLEEL 178
Query: 181 VVKNCGGISQYDLLLFGPGWMKLERFVF--EVSNLYNILRLRDPSFVANYQRSYDFCCES 238
VV NC GISQYD L FG GWMKL++FVF + + + + + DPS+ AN YD CCE+
Sbjct: 179 VVNNCPGISQYDFLKFGRGWMKLKKFVFVNKETMVNHFITRHDPSYNANCVYKYDLCCEN 238
Query: 239 LKDLRLRGIATV---EEIGLRSLLGKCKSLQILCLHFVLGLTDSDMITLSQNCSNLKSIS 295
L+DLRL + T EIGLR LL KCK+L+ LCL +V GL D DMI LSQ+C NLKSIS
Sbjct: 239 LEDLRLARLRTEPEGPEIGLRFLLRKCKALEKLCLEYVGGLIDKDMIVLSQSCKNLKSIS 298
Query: 296 LQLEPVVGVGPQGRVFRMPLTDVSLKALALGCRMLQIVELAVYS-RHTSYPEIGFSQEGL 354
L + P + V RM TD SL+ LA C +LQ +EL YPEIGF+QEGL
Sbjct: 299 LWMMP--RRFHEHEVLRMGFTDESLEMLAHNCPLLQDLELTFAGVEDLEYPEIGFTQEGL 356
Query: 355 ATLFQSCPIRELVLCGANIFDDEVMKALSSAQFLETLKLMDCKRITDAGMRLLANSSSLV 414
L SCPIR L L G F+D+ MK LSSA FL+TL+L+DCK+ITD GM L + L
Sbjct: 357 VKLMHSCPIRSLTLNGTLFFNDKGMKGLSSAPFLKTLRLVDCKKITDYGMCFLVHYPCLA 416
Query: 415 NLTLQDCRGFTDDGVSEVVRARNLDSLIVQGC-RVSWKAVKGAAKSVRYDRN 465
+L LQ C G TD G++E+V A+ L SL+V+GC +S AV+G+A+SV+Y N
Sbjct: 417 DLKLQYCSGLTDVGIAELVHAQKLQSLVVEGCSNISEHAVQGSARSVQYFPN 468
>Os04g0371600 Leucine-rich repeat, cysteine-containing containing protein
Length = 300
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 166/294 (56%), Positives = 195/294 (66%), Gaps = 8/294 (2%)
Query: 43 IRVGRGLWPAKEALLTLCSRFSNLRKVEINYHDSTRGDGNQIDNQGXXXXXXXXXXXXXX 102
I VG GL A EAL L S+F NL KVEINY G+G+QIDNQG
Sbjct: 8 ICVGSGL--AIEALPALFSQFPNLHKVEINYSGWAPGNGSQIDNQGLRVLSFSLPLLNDL 65
Query: 103 ILSFCYYIDDSGLAYLTDCKKLVSLRLNSAKNITSSGLLVVAIGCKNLSGLHLINCNKIS 162
LSFC I+DSGLA LT+CK L+SL+LNS ITS GLL +A+GCK LS LHL NC I+
Sbjct: 66 TLSFCSEINDSGLACLTNCKMLMSLKLNSTPEITSRGLLSLAVGCKTLSSLHLNNCKGIT 125
Query: 163 GNPEWLKYLGSDGSLEELVVKNCGGISQYDLLLFGPGWMKLERFVFE-VSNLYNILRL-R 220
+ EWL++LG++GSLEELVVKNC GI QY L+FGPGWMKL++F FE + ++I R R
Sbjct: 126 SSTEWLEHLGTNGSLEELVVKNCKGIGQYHFLMFGPGWMKLQKFEFENEQSFWSIFRRDR 185
Query: 221 DPSFVANYQRSYDFCCESLKDLRLRGIATV---EEIGLRSLLGKCKSLQILCLHFVLGLT 277
DPS+ A+ R YD CE LKDLRL I T EIGLR LLGKC+SL+ L L +V GL
Sbjct: 186 DPSYKAHTYR-YDLLCEGLKDLRLVHIVTEPKGPEIGLRFLLGKCRSLEKLSLEYVSGLI 244
Query: 278 DSDMITLSQNCSNLKSISLQLEPVVGVGPQGRVFRMPLTDVSLKALALGCRMLQ 331
D+DMI LSQ C NLKSISL L+P +FR TD SLKALAL C LQ
Sbjct: 245 DNDMIALSQTCKNLKSISLWLKPEHYNVGDDIIFRTGFTDESLKALALNCPFLQ 298
>Os12g0526600 Cyclin-like F-box domain containing protein
Length = 203
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 156/203 (76%)
Query: 1 MEDLPGAALAEIMKRITRTSDLSSLSLVSKRLYTIDAEHRSTIRVGRGLWPAKEALLTLC 60
ME LP A + EI+KRI TSDLSSLSLVSKRLY I+AEHR +IR+G L PA +A+++LC
Sbjct: 1 MEGLPDALIGEIVKRIESTSDLSSLSLVSKRLYKIEAEHRHSIRIGHNLPPATDAIISLC 60
Query: 61 SRFSNLRKVEINYHDSTRGDGNQIDNQGXXXXXXXXXXXXXXILSFCYYIDDSGLAYLTD 120
SRF NL V+INY T+G GNQ+DN G LSFC YIDD+GL YL
Sbjct: 61 SRFHNLFNVDINYSGWTQGHGNQLDNHGLHILSSYCLSLSDITLSFCSYIDDTGLGYLAF 120
Query: 121 CKKLVSLRLNSAKNITSSGLLVVAIGCKNLSGLHLINCNKISGNPEWLKYLGSDGSLEEL 180
CKKL++LRLNSAK ITSSGLL VA+GCKNLS +HLINCNKISG EWLKYLGSDGSLEEL
Sbjct: 121 CKKLMTLRLNSAKRITSSGLLAVAVGCKNLSAIHLINCNKISGTFEWLKYLGSDGSLEEL 180
Query: 181 VVKNCGGISQYDLLLFGPGWMKL 203
VVKNC ISQ+ LLLFGPGWMKL
Sbjct: 181 VVKNCERISQFSLLLFGPGWMKL 203
>Os04g0370300 Conserved hypothetical protein
Length = 192
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Query: 1 MEDLPGAALAEIMKRITRTSDLSSLSLVSKRLYTIDAEHRSTIRVGRGLWPAKEALLTLC 60
ME L + EI+K+ITRTSDL+SLSLVSK+LYTIDAE R+ IR+G GL A E L LC
Sbjct: 1 MEHLSEELIIEILKKITRTSDLNSLSLVSKQLYTIDAEQRAAIRLGCGL--ATEDFLALC 58
Query: 61 SRFSNLRKVEINYHDSTRGDGNQIDNQGXXXXXXXXXXXXXXILSFCYYIDDSGLAYLTD 120
SRF NL KVEI+Y ST G+GN IDNQG L+FC I+D+G+ L+
Sbjct: 59 SRFPNLLKVEIDYSGSTPGNGNHIDNQGLFVLSSCCTLLNDITLTFCSKINDAGIVCLSY 118
Query: 121 CKKLVSLRLNSAKNITSSGLLVVAIGCKNLSGLHLINCNKISGNPEWLKYLGSDGSLEEL 180
CKKL+SL+LNS +TSSGLL++ GCK LS L + +C I+G+ EWL+YLG+DGSLEEL
Sbjct: 119 CKKLISLKLNSLPEVTSSGLLMLFFGCKALSSLFINDCKGIAGSTEWLEYLGTDGSLEEL 178
Query: 181 VVKNCGGISQYDLL 194
VV NC ISQYD L
Sbjct: 179 VVNNCQEISQYDFL 192
>Os02g0798900 Conserved hypothetical protein
Length = 207
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
Query: 1 MEDLPGAALAEIMKRITRTSDLSSLSLVSKRLYTIDAEHRSTIRVGRGLWPAKEALLTLC 60
M++L LAEI+KRI +TSD +SLSLVSK+LYTIDAE R I VG GL PA EAL +LC
Sbjct: 1 MDNLSEPLLAEIIKRIAKTSDRNSLSLVSKQLYTIDAEQRDAIHVGCGLHPATEALASLC 60
Query: 61 SRFSNLRKVEINYHDSTRGDGNQIDNQGXXXXXXXXXXXXXXILSFCYYIDDSGLAYLTD 120
SRF NL KV I+Y G Q+DNQG L+FC YIDDSG+ YL
Sbjct: 61 SRFPNLWKVVIDYSGWISIHGKQLDNQGLLVLSSHCSSLTDLTLNFCSYIDDSGIGYLAY 120
Query: 121 CKKLVSLRLNSAKNITSSGLLVVAIGCKNLSGLHLINCNKISGNPEWLKYLGSDGSLEEL 180
CKKL S RLN A I+S GLL VA+GCK+L HL++C K+ G+ EWL+YLG GSLEEL
Sbjct: 121 CKKLRSFRLNFAPAISSRGLLSVAVGCKSLCTFHLVDCMKV-GSVEWLEYLGRAGSLEEL 179
Query: 181 VVKNC 185
VVK+C
Sbjct: 180 VVKDC 184
>Os04g0370800
Length = 164
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/151 (56%), Positives = 106/151 (70%), Gaps = 6/151 (3%)
Query: 125 VSLRLNSAKNITSSGLLVVAIGCKNLSGLHLINCNKISGNPEWLKYLGSDGSLEELVVKN 184
+SLRLNS +TSSGLL++A+GCK LS ++L +C I+G+ EWL++LG++GSLEEL VKN
Sbjct: 1 MSLRLNSIPELTSSGLLLLAVGCKALSSVYLNDCKGIAGSTEWLEHLGANGSLEELAVKN 60
Query: 185 CGGISQYDLLLFGPGWMKLERFVFEVSNLYNILRLR--DPSFVANYQRSYDFCCESLKDL 242
C GI QY L FG GWMKL +F FE + R DPS+ A+ R YD CESLKDL
Sbjct: 61 CKGIGQYHFLKFGSGWMKLRKFEFENEQGFWSFFHRDWDPSYKADTYR-YDLLCESLKDL 119
Query: 243 RLRGIATV---EEIGLRSLLGKCKSLQILCL 270
RL + T EIGLR LLGKCK+L+ LCL
Sbjct: 120 RLAHLVTEPEGPEIGLRFLLGKCKALERLCL 150
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,159,931
Number of extensions: 536058
Number of successful extensions: 1810
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 1735
Number of HSP's successfully gapped: 13
Length of query: 482
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 377
Effective length of database: 11,553,331
Effective search space: 4355605787
Effective search space used: 4355605787
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)