Os02g0798900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0798900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.99 | 0.308 | 11 | 1.06 | 0.611 | -0.445 | 0.873 | -0.686 | 0.161 | 18.6 | 0.1306 | 5458 | -- | -- |
| 43.4 | 0.307 | 11 | 1.02 | 0.615 | -0.484 | 0.886 | -- | 0.152 | 18.5 | 0.3274 | 5457 | -- | -- |
| 44.9 | 0.312 | 11 | 1.05 | 0.61 | -0.456 | -- | -0.704 | 0.16 | 18.6 | 0.108 | 5457 | -- | -- |
| 45.36 | 0.314 | 11 | 1.01 | 0.618 | -0.504 | -- | -- | 0.155 | 18.6 | 0.2993 | 5457 | -- | -- |
| 64.53 | 0.374 | 11 | 1.04 | -- | -0.464 | -- | -0.873 | 0.151 | -- | 0.2275 | 5421 | -- | -- |
| 46.69 | 0.32 | 11 | 0.942 | 0.617 | -- | 0.938 | -- | 0.206 | 18.5 | -- | -- | -- | -- |
| 48.9 | 0.327 | 11 | 0.929 | 0.62 | -- | -- | -- | 0.209 | 18.6 | -- | -- | -- | -- |
| 65.24 | 0.376 | 11 | 1.01 | -- | -0.483 | -- | -- | 0.148 | -- | 0.1884 | 5421 | -- | -- |
| 67.87 | 0.384 | 11 | -- | 0.647 | -0.367 | -- | -- | 0.0583 | 18.6 | 0.5 | 13305 | -- | -- |
| 68.93 | 0.388 | 11 | 0.914 | -- | -- | -- | -- | 0.196 | -- | -- | -- | -- | -- |
| 71.63 | 0.396 | 11 | -- | 0.608 | -- | -- | -- | 0.105 | 18.7 | -- | -- | -- | -- |
| 86.84 | 0.434 | 11 | -- | -- | -0.37 | -- | -- | 0.00527 | -- | 0.264 | 13408 | -- | -- |
| 90.94 | 0.445 | 11 | -- | -- | -- | -- | -- | 0.0945 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.26 | temperature | 25.0 | 90 | > th | dose independent | rect. | 21 | 10 |
| 2 | 41.32 | temperature | 25.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 8 | 41.69 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 10 | 41.72 | temperature | 25.0 | 270 | > th | dose independent | rect. | 18 | 13 |
| 11 | 41.75 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 22 | 9 |
| 13 | 41.77 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 15 | 41.81 | temperature | 25.0 | 90 | > th | dose independent | sin | 10 | NA |
| 27 | 41.90 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 37 | 41.99 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 47 | 42.10 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 138 | 42.53 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 9 |
| 140 | 42.53 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 9 |
| 155 | 42.58 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 156 | 42.58 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 157 | 42.58 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 17 |
| 164 | 42.59 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 166 | 42.59 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 9 |
| 167 | 42.59 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 171 | 42.60 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 17 |
| 177 | 42.60 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 17 |
| 185 | 42.62 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 186 | 42.62 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 189 | 42.62 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 220 | 42.67 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 12 |
| 248 | 42.71 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 263 | 42.73 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 282 | 42.77 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 285 | 42.77 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 310 | 42.81 | temperature | 25.0 | 90 | < th | dose independent | sin | 9 | NA |
| 393 | 42.89 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 406 | 42.90 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 4 | NA |
| 410 | 42.90 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 12 |
| 426 | 42.91 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 14 |
| 432 | 42.91 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 446 | 42.93 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 20 |
| 452 | 42.93 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 20 |
| 460 | 42.94 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 20 |
| 461 | 42.94 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 9 | NA |
| 493 | 42.96 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 22 | 5 |
| 519 | 42.98 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 6 | 10 |
| 536 | 42.99 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 12 |
| 537 | 42.99 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 12 |
| 541 | 42.99 | wind | 3.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 546 | 42.99 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 12 |
| 561 | 43.00 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 575 | 43.01 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 581 | 43.02 | wind | 3.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 583 | 43.02 | temperature | 25.0 | 720 | > th | dose independent | rect. | 24 | 1 |
| 584 | 43.02 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 592 | 43.02 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 596 | 43.02 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 597 | 43.02 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 602 | 43.02 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 24 | 12 |
| 610 | 43.02 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 611 | 43.03 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 629 | 43.04 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 15 |
| 634 | 43.04 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 9 |
| 645 | 43.05 | temperature | 25.0 | 90 | > th | dose independent | rect. | 24 | 7 |
| 670 | 43.06 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 671 | 43.06 | temperature | 25.0 | 720 | > th | dose independent | rect. | 24 | 6 |
| 680 | 43.06 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 24 | 2 |
| 694 | 43.07 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 9 |
| 707 | 43.07 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 9 |
| 720 | 43.08 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 12 | 2 |
| 729 | 43.08 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 732 | 43.08 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 776 | 43.10 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 9 |
| 835 | 43.13 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 847 | 43.13 | radiation | 10.0 | 30 | > th | dose independent | rect. | 16 | 15 |
| 893 | 43.14 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 11 |
| 922 | 43.15 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 6 |
| 932 | 43.16 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 933 | 43.16 | wind | 1.0 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 949 | 43.16 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 12 | 6 |
| 974 | 43.17 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 990 | 43.18 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 4 |