BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0516900 Os12g0516900|AK101082
(390 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0516900 Cyclin-like F-box domain containing protein 768 0.0
Os12g0517000 Cyclin-like F-box domain containing protein 536 e-152
Os12g0517100 Cyclin-like F-box domain containing protein 412 e-115
Os04g0370600 4Fe-4S ferredoxin, iron-sulfur binding domain ... 398 e-111
Os04g0370500 Leucine-rich repeat, cysteine-containing conta... 387 e-108
Os12g0526600 Cyclin-like F-box domain containing protein 326 2e-89
Os04g0371600 Leucine-rich repeat, cysteine-containing conta... 297 8e-81
Os02g0798900 Conserved hypothetical protein 221 5e-58
Os04g0370300 Conserved hypothetical protein 193 1e-49
Os04g0370800 161 8e-40
>Os12g0516900 Cyclin-like F-box domain containing protein
Length = 390
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/390 (96%), Positives = 377/390 (96%)
Query: 1 MEDLPDALIGEIVKRVXXXXXXXXXXXXXKRLYKIEAESRHTIHISCSLGPATDAIVSLC 60
MEDLPDALIGEIVKRV KRLYKIEAESRHTIHISCSLGPATDAIVSLC
Sbjct: 1 MEDLPDALIGEIVKRVSSTSDLSSLSLVSKRLYKIEAESRHTIHISCSLGPATDAIVSLC 60
Query: 61 SRFHNLLKVDINYSGWTQDHGNQLDNHGLRILSSYCLSLSDITLSFCSYIDDTGLGYLAF 120
SRFHNLLKVDINYSGWTQDHGNQLDNHGLRILSSYCLSLSDITLSFCSYIDDTGLGYLAF
Sbjct: 61 SRFHNLLKVDINYSGWTQDHGNQLDNHGLRILSSYCLSLSDITLSFCSYIDDTGLGYLAF 120
Query: 121 CKKLITLRLNSATKITSSGLLAVAVGCKNLSALHLIDCNKISGAFEWLKYLGSDGSLEEL 180
CKKLITLRLNSATKITSSGLLAVAVGCKNLSALHLIDCNKISGAFEWLKYLGSDGSLEEL
Sbjct: 121 CKKLITLRLNSATKITSSGLLAVAVGCKNLSALHLIDCNKISGAFEWLKYLGSDGSLEEL 180
Query: 181 KVKNCVGINQYSLLMFGPGWMKLQRFVFEFRNIYSIFESKDPSYVANCQYRYDFSCENLK 240
KVKNCVGINQYSLLMFGPGWMKLQRFVFEFRNIYSIFESKDPSYVANCQYRYDFSCENLK
Sbjct: 181 KVKNCVGINQYSLLMFGPGWMKLQRFVFEFRNIYSIFESKDPSYVANCQYRYDFSCENLK 240
Query: 241 QLSLRRIVTMEEIGLRSLLGKCKSLEKLCLHFVLGLTDSDMITLAQNCSNLRSISLQLEP 300
QLSLRRIVTMEEIGLRSLLGKCKSLEKLCLHFVLGLTDSDMITLAQNCSNLRSISLQLEP
Sbjct: 241 QLSLRRIVTMEEIGLRSLLGKCKSLEKLCLHFVLGLTDSDMITLAQNCSNLRSISLQLEP 300
Query: 301 VFCEGPEGRVCRTPLTDESLKALAGCRMLQVVELTMFGCDYAYPEIGFTQEGLMMFFQSC 360
VFCEGPEGRVCRTPLTDESLKALAGCRMLQVVELTMFGCDYAYPEIGFTQEGLMMFFQSC
Sbjct: 301 VFCEGPEGRVCRTPLTDESLKALAGCRMLQVVELTMFGCDYAYPEIGFTQEGLMMFFQSC 360
Query: 361 PIRDLVLCGANIFDDEGMKALSSAQFLQTL 390
PIRDLVLCGANIFDDEGMKALSSAQFLQTL
Sbjct: 361 PIRDLVLCGANIFDDEGMKALSSAQFLQTL 390
>Os12g0517000 Cyclin-like F-box domain containing protein
Length = 482
Score = 536 bits (1380), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/391 (68%), Positives = 309/391 (79%), Gaps = 1/391 (0%)
Query: 1 MEDLPDALIGEIVKRVXXXXXXXXXXXXXKRLYKIEAESRHTIHISCSLGPATDAIVSLC 60
MEDLP A + EI+KR+ KRLY I+AE R TI + L PA +A+++LC
Sbjct: 1 MEDLPGAALAEIMKRITRTSDLSSLSLVSKRLYTIDAEHRSTIRVGRGLWPAKEALLTLC 60
Query: 61 SRFHNLLKVDINYSGWTQDHGNQLDNHGLRILSSYCLSLSDITLSFCSYIDDTGLGYLAF 120
SRF NL KV+INY T+ GNQ+DN GL LS+ C L+D+ LSFC YIDD+GL YL
Sbjct: 61 SRFSNLRKVEINYHDSTRGDGNQIDNQGLLTLSTCCPLLTDLILSFCYYIDDSGLAYLTD 120
Query: 121 CKKLITLRLNSATKITSSGLLAVAVGCKNLSALHLIDCNKISGAFEWLKYLGSDGSLEEL 180
CKKL++LRLNSA ITSSGLL VA+GCKNLS LHLI+CNKISG EWLKYLGSDGSLEEL
Sbjct: 121 CKKLVSLRLNSAKNITSSGLLVVAIGCKNLSGLHLINCNKISGNPEWLKYLGSDGSLEEL 180
Query: 181 KVKNCVGINQYSLLMFGPGWMKLQRFVFEFRNIYSIFESKDPSYVANCQYRYDFSCENLK 240
VKNC GI+QY LL+FGPGWMKL+RFVFE N+Y+I +DPS+VAN Q YDF CE+LK
Sbjct: 181 VVKNCGGISQYDLLLFGPGWMKLERFVFEVSNLYNILRLRDPSFVANYQRSYDFCCESLK 240
Query: 241 QLSLRRIVTMEEIGLRSLLGKCKSLEKLCLHFVLGLTDSDMITLAQNCSNLRSISLQLEP 300
L LR I T+EEIGLRSLLGKCKSL+ LCLHFVLGLTDSDMITL+QNCSNL+SISLQLEP
Sbjct: 241 DLRLRGIATVEEIGLRSLLGKCKSLQILCLHFVLGLTDSDMITLSQNCSNLKSISLQLEP 300
Query: 301 VFCEGPEGRVCRTPLTDESLKALA-GCRMLQVVELTMFGCDYAYPEIGFTQEGLMMFFQS 359
V GP+GRV R PLTD SLKALA GCRMLQ+VEL ++ +YPEIGF+QEGL FQS
Sbjct: 301 VVGVGPQGRVFRMPLTDVSLKALALGCRMLQIVELAVYSRHTSYPEIGFSQEGLATLFQS 360
Query: 360 CPIRDLVLCGANIFDDEGMKALSSAQFLQTL 390
CPIR+LVLCGANIFDDE MKALSSAQFL+TL
Sbjct: 361 CPIRELVLCGANIFDDEVMKALSSAQFLETL 391
>Os12g0517100 Cyclin-like F-box domain containing protein
Length = 501
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/394 (57%), Positives = 284/394 (72%), Gaps = 12/394 (3%)
Query: 1 MEDLPDALIGEIVKRVXXXXXXXXXXXXXKRLYKIEAESRHTIHISCSLGPATDAIVSLC 60
+EDLPDAL+ EIVKR+ KRLY IEAE R +I + L PA DA+ +LC
Sbjct: 31 LEDLPDALLAEIVKRITNTSDLKSISLVSKRLYTIEAEQRSSIRVGSDLCPAIDALSALC 90
Query: 61 SRFHNLLKVDINYSGWTQDHGNQLDNHGLRILSSYCLSLSDITLSFCSYIDDTGLGYLAF 120
SRF NLL+V+++YSGW + H N L+ H I S + L D+TL YIDD +G LA
Sbjct: 91 SRFPNLLEVEMDYSGW-KFHWNLLEKH---IFSLHFPVLRDLTL----YIDDIRMGCLAS 142
Query: 121 CKKLITLRLNSATKITSSGLLAVAVGCKNLSALHLIDCNKISGAFEWLKYLGSDGSLEEL 180
CK L++LRLNS + I S GLL+VAVGCKNL++LH+I CN I G+ +WL+Y+GS GSLEEL
Sbjct: 143 CKNLMSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKCNHIVGSDKWLEYIGSAGSLEEL 202
Query: 181 KVKNCVGINQYSLLMFGPGWMKLQRFVFEFRNIYSIFESKDPSYVANCQYRYDFSCENLK 240
VKNC I+QY LL FGPGWMKL++F F+F+ ++ +E +DP YV N QY YDF CE+L+
Sbjct: 203 VVKNCKRISQYDLLKFGPGWMKLKKFEFKFKRSFNTYEPRDPCYVDNYQYGYDFCCESLR 262
Query: 241 QLSLRRIVTMEEIGLRSLLGKCKSLEKLCLHFVLGLTDSDMITLAQNCSNLRSISLQLEP 300
++L IVT EIGLR LL KCK+LE+LCLH+V+G++D D+IT++QNCSNLRSISL E
Sbjct: 263 DVTLATIVTKPEIGLRCLLTKCKALERLCLHYVIGISDHDIITISQNCSNLRSISLSQEM 322
Query: 301 VFCEGP--EGRVCRTPLTDESLKALA-GCRMLQVVELTMFGCDYAYP-EIGFTQEGLMMF 356
+ CE P G + RTPLTD+SL ALA ML+ VEL +GC +P EI FTQ+GL+
Sbjct: 323 LLCEIPGGTGVMARTPLTDDSLNALALRSHMLEAVELMFYGCAPDWPSEIAFTQDGLVTL 382
Query: 357 FQSCPIRDLVLCGANIFDDEGMKALSSAQFLQTL 390
QSCPIR LVL GAN FDDEGM+ALS AQFL+TL
Sbjct: 383 LQSCPIRHLVLRGANFFDDEGMEALSCAQFLETL 416
>Os04g0370600 4Fe-4S ferredoxin, iron-sulfur binding domain containing protein
Length = 479
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/396 (56%), Positives = 277/396 (69%), Gaps = 9/396 (2%)
Query: 1 MEDLPDALIGEIVKRVXXXXXXXXXXXXXKRLYKIEAESRHTIHISCSLGPATDAIVSLC 60
ME L + LI EI+KR+ K+LY I+AE R TI I C L +T+ +LC
Sbjct: 1 MEHLSEELIIEILKRITRTSDLNSVSLVSKQLYAIDAEQRATICIGCGL--STEDFSALC 58
Query: 61 SRFHNLLKVDINYSGWTQDHGNQLDNHGLRILSSYCLSLSDITLSFCSYIDDTGLGYLAF 120
SRF NLLKV+I+YSG T +GN +DN GL +L+S C L+DITLSFCS I+D G+ L +
Sbjct: 59 SRFPNLLKVEIDYSGSTPGNGNHIDNQGLFVLTSCCTLLNDITLSFCSKINDAGIACLTY 118
Query: 121 CKKLITLRLNSATKITSSGLLAVAVGCKNLSALHLIDCNKISGAFEWLKYLGSDGSLEEL 180
CKKL++L+LNS ++TSSGLL VA GCK LS+L+L DC I+G+ EWL+YLGSDGSLEEL
Sbjct: 119 CKKLMSLKLNSIPEVTSSGLLMVAFGCKALSSLYLNDCKGIAGSTEWLEYLGSDGSLEEL 178
Query: 181 KVKNCVGINQYSLLMFGPGWMKLQRFVFEFR-NIYSIFESKDPSYVANCQYRYDFSCENL 239
V NC G++QY+ L FGPGWMKL+ F +E + N +SI S AN +RY+ CENL
Sbjct: 179 IVSNCKGVSQYNFLKFGPGWMKLKTFEYENKENFFSIHPRYGSSVKAN-THRYELCCENL 237
Query: 240 KQLSLRRIVTM---EEIGLRSLLGKCKSLEKLCLHFVLGLTDSDMITLAQNCSNLRSISL 296
K L L R+VT EIGLR LLGKCK+LEKLCL +V G+ D+DMI L+Q C NL+SISL
Sbjct: 238 KDLKLVRLVTEPDGPEIGLRFLLGKCKALEKLCLEYVTGVIDNDMIVLSQACKNLKSISL 297
Query: 297 QLEPVFCEGPEGRVCRTPLTDESLKALA-GCRMLQVVELTMFGC-DYAYPEIGFTQEGLM 354
L+P RT TDESLKALA C +LQ VELT GC + PEIGFTQEGL+
Sbjct: 298 WLKPEHYVVGGHIEFRTGFTDESLKALALNCPLLQDVELTFTGCAHWDPPEIGFTQEGLV 357
Query: 355 MFFQSCPIRDLVLCGANIFDDEGMKALSSAQFLQTL 390
F +SCPIR LVL GA F+++GMKALSSAQFL+TL
Sbjct: 358 SFVESCPIRVLVLNGALFFNNKGMKALSSAQFLETL 393
>Os04g0370500 Leucine-rich repeat, cysteine-containing containing protein
Length = 480
Score = 387 bits (994), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/397 (54%), Positives = 265/397 (66%), Gaps = 11/397 (2%)
Query: 1 MEDLPDALIGEIVKRVXXXXXXXXXXXXXKRLYKIEAESRHTIHISCSLGPATDAIVSLC 60
ME L + LI EI+KR+ K+LY I+AE R TI I C L +T+ +LC
Sbjct: 1 MERLSEELIIEILKRITRTSDLNSLSLVSKQLYAIDAEQRATICIDCGL--STEDFSALC 58
Query: 61 SRFHNLLKVDINYSGWTQDHGNQLDNHGLRILSSYCLSLSDITLSFCSYIDDTGLGYLAF 120
SRF NLLKV+I SG T +GN +DN GL +LSS C SL+D+TLSFCS I+D G+ L +
Sbjct: 59 SRFPNLLKVEIGNSGSTPGNGNHIDNQGLFVLSSSCNSLNDLTLSFCSKINDAGIASLTY 118
Query: 121 CKKLITLRLNSATKITSSGLLAVAVGCKNLSALHLIDCNKISGAFEWLKYLGSDGSLEEL 180
CKKL++L+LNS +TSSGLL VA GCK LS+L+L DC I+ + EWL+YLGSDGSLEEL
Sbjct: 119 CKKLMSLKLNSIPDVTSSGLLLVAFGCKALSSLYLNDCKGIAASTEWLEYLGSDGSLEEL 178
Query: 181 KVKNCVGINQYSLLMFGPGWMKLQRFVFEFRN--IYSIFESKDPSYVANCQYRYDFSCEN 238
V NC GI+QY L FG GWMKL++FVF + + DPSY ANC Y+YD CEN
Sbjct: 179 VVNNCPGISQYDFLKFGRGWMKLKKFVFVNKETMVNHFITRHDPSYNANCVYKYDLCCEN 238
Query: 239 LKQLSLRRIVTM---EEIGLRSLLGKCKSLEKLCLHFVLGLTDSDMITLAQNCSNLRSIS 295
L+ L L R+ T EIGLR LL KCK+LEKLCL +V GL D DMI L+Q+C NL+SIS
Sbjct: 239 LEDLRLARLRTEPEGPEIGLRFLLRKCKALEKLCLEYVGGLIDKDMIVLSQSCKNLKSIS 298
Query: 296 LQLEPVFCEGPEGRVCRTPLTDESLKALA-GCRMLQVVELTMFGC-DYAYPEIGFTQEGL 353
L + P E V R TDESL+ LA C +LQ +ELT G D YPEIGFTQEGL
Sbjct: 299 LWMMPR--RFHEHEVLRMGFTDESLEMLAHNCPLLQDLELTFAGVEDLEYPEIGFTQEGL 356
Query: 354 MMFFQSCPIRDLVLCGANIFDDEGMKALSSAQFLQTL 390
+ SCPIR L L G F+D+GMK LSSA FL+TL
Sbjct: 357 VKLMHSCPIRSLTLNGTLFFNDKGMKGLSSAPFLKTL 393
>Os12g0526600 Cyclin-like F-box domain containing protein
Length = 203
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 164/203 (80%), Positives = 175/203 (86%)
Query: 1 MEDLPDALIGEIVKRVXXXXXXXXXXXXXKRLYKIEAESRHTIHISCSLGPATDAIVSLC 60
ME LPDALIGEIVKR+ KRLYKIEAE RH+I I +L PATDAI+SLC
Sbjct: 1 MEGLPDALIGEIVKRIESTSDLSSLSLVSKRLYKIEAEHRHSIRIGHNLPPATDAIISLC 60
Query: 61 SRFHNLLKVDINYSGWTQDHGNQLDNHGLRILSSYCLSLSDITLSFCSYIDDTGLGYLAF 120
SRFHNL VDINYSGWTQ HGNQLDNHGL ILSSYCLSLSDITLSFCSYIDDTGLGYLAF
Sbjct: 61 SRFHNLFNVDINYSGWTQGHGNQLDNHGLHILSSYCLSLSDITLSFCSYIDDTGLGYLAF 120
Query: 121 CKKLITLRLNSATKITSSGLLAVAVGCKNLSALHLIDCNKISGAFEWLKYLGSDGSLEEL 180
CKKL+TLRLNSA +ITSSGLLAVAVGCKNLSA+HLI+CNKISG FEWLKYLGSDGSLEEL
Sbjct: 121 CKKLMTLRLNSAKRITSSGLLAVAVGCKNLSAIHLINCNKISGTFEWLKYLGSDGSLEEL 180
Query: 181 KVKNCVGINQYSLLMFGPGWMKL 203
VKNC I+Q+SLL+FGPGWMKL
Sbjct: 181 VVKNCERISQFSLLLFGPGWMKL 203
>Os04g0371600 Leucine-rich repeat, cysteine-containing containing protein
Length = 300
Score = 297 bits (761), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 165/287 (57%), Positives = 206/287 (71%), Gaps = 7/287 (2%)
Query: 50 GPATDAIVSLCSRFHNLLKVDINYSGWTQDHGNQLDNHGLRILSSYCLSLSDITLSFCSY 109
G A +A+ +L S+F NL KV+INYSGW +G+Q+DN GLR+LS L+D+TLSFCS
Sbjct: 13 GLAIEALPALFSQFPNLHKVEINYSGWAPGNGSQIDNQGLRVLSFSLPLLNDLTLSFCSE 72
Query: 110 IDDTGLGYLAFCKKLITLRLNSATKITSSGLLAVAVGCKNLSALHLIDCNKISGAFEWLK 169
I+D+GL L CK L++L+LNS +ITS GLL++AVGCK LS+LHL +C I+ + EWL+
Sbjct: 73 INDSGLACLTNCKMLMSLKLNSTPEITSRGLLSLAVGCKTLSSLHLNNCKGITSSTEWLE 132
Query: 170 YLGSDGSLEELKVKNCVGINQYSLLMFGPGWMKLQRFVFEF-RNIYSIF-ESKDPSYVAN 227
+LG++GSLEEL VKNC GI QY LMFGPGWMKLQ+F FE ++ +SIF +DPSY A+
Sbjct: 133 HLGTNGSLEELVVKNCKGIGQYHFLMFGPGWMKLQKFEFENEQSFWSIFRRDRDPSYKAH 192
Query: 228 CQYRYDFSCENLKQLSLRRIVTM---EEIGLRSLLGKCKSLEKLCLHFVLGLTDSDMITL 284
YRYD CE LK L L IVT EIGLR LLGKC+SLEKL L +V GL D+DMI L
Sbjct: 193 -TYRYDLLCEGLKDLRLVHIVTEPKGPEIGLRFLLGKCRSLEKLSLEYVSGLIDNDMIAL 251
Query: 285 AQNCSNLRSISLQLEPVFCEGPEGRVCRTPLTDESLKALA-GCRMLQ 330
+Q C NL+SISL L+P + + RT TDESLKALA C LQ
Sbjct: 252 SQTCKNLKSISLWLKPEHYNVGDDIIFRTGFTDESLKALALNCPFLQ 298
>Os02g0798900 Conserved hypothetical protein
Length = 207
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/197 (55%), Positives = 141/197 (71%), Gaps = 1/197 (0%)
Query: 1 MEDLPDALIGEIVKRVXXXXXXXXXXXXXKRLYKIEAESRHTIHISCSLGPATDAIVSLC 60
M++L + L+ EI+KR+ K+LY I+AE R IH+ C L PAT+A+ SLC
Sbjct: 1 MDNLSEPLLAEIIKRIAKTSDRNSLSLVSKQLYTIDAEQRDAIHVGCGLHPATEALASLC 60
Query: 61 SRFHNLLKVDINYSGWTQDHGNQLDNHGLRILSSYCLSLSDITLSFCSYIDDTGLGYLAF 120
SRF NL KV I+YSGW HG QLDN GL +LSS+C SL+D+TL+FCSYIDD+G+GYLA+
Sbjct: 61 SRFPNLWKVVIDYSGWISIHGKQLDNQGLLVLSSHCSSLTDLTLNFCSYIDDSGIGYLAY 120
Query: 121 CKKLITLRLNSATKITSSGLLAVAVGCKNLSALHLIDCNKISGAFEWLKYLGSDGSLEEL 180
CKKL + RLN A I+S GLL+VAVGCK+L HL+DC K+ G+ EWL+YLG GSLEEL
Sbjct: 121 CKKLRSFRLNFAPAISSRGLLSVAVGCKSLCTFHLVDCMKV-GSVEWLEYLGRAGSLEEL 179
Query: 181 KVKNCVGINQYSLLMFG 197
VK+C N+ L+ G
Sbjct: 180 VVKDCKCRNKSWLVGLG 196
>Os04g0370300 Conserved hypothetical protein
Length = 192
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 135/194 (69%), Gaps = 2/194 (1%)
Query: 1 MEDLPDALIGEIVKRVXXXXXXXXXXXXXKRLYKIEAESRHTIHISCSLGPATDAIVSLC 60
ME L + LI EI+K++ K+LY I+AE R I + C G AT+ ++LC
Sbjct: 1 MEHLSEELIIEILKKITRTSDLNSLSLVSKQLYTIDAEQRAAIRLGC--GLATEDFLALC 58
Query: 61 SRFHNLLKVDINYSGWTQDHGNQLDNHGLRILSSYCLSLSDITLSFCSYIDDTGLGYLAF 120
SRF NLLKV+I+YSG T +GN +DN GL +LSS C L+DITL+FCS I+D G+ L++
Sbjct: 59 SRFPNLLKVEIDYSGSTPGNGNHIDNQGLFVLSSCCTLLNDITLTFCSKINDAGIVCLSY 118
Query: 121 CKKLITLRLNSATKITSSGLLAVAVGCKNLSALHLIDCNKISGAFEWLKYLGSDGSLEEL 180
CKKLI+L+LNS ++TSSGLL + GCK LS+L + DC I+G+ EWL+YLG+DGSLEEL
Sbjct: 119 CKKLISLKLNSLPEVTSSGLLMLFFGCKALSSLFINDCKGIAGSTEWLEYLGTDGSLEEL 178
Query: 181 KVKNCVGINQYSLL 194
V NC I+QY L
Sbjct: 179 VVNNCQEISQYDFL 192
>Os04g0370800
Length = 164
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/152 (57%), Positives = 111/152 (73%), Gaps = 6/152 (3%)
Query: 125 ITLRLNSATKITSSGLLAVAVGCKNLSALHLIDCNKISGAFEWLKYLGSDGSLEELKVKN 184
++LRLNS ++TSSGLL +AVGCK LS+++L DC I+G+ EWL++LG++GSLEEL VKN
Sbjct: 1 MSLRLNSIPELTSSGLLLLAVGCKALSSVYLNDCKGIAGSTEWLEHLGANGSLEELAVKN 60
Query: 185 CVGINQYSLLMFGPGWMKLQRFVFEF-RNIYSIFESK-DPSYVANCQYRYDFSCENLKQL 242
C GI QY L FG GWMKL++F FE + +S F DPSY A+ YRYD CE+LK L
Sbjct: 61 CKGIGQYHFLKFGSGWMKLRKFEFENEQGFWSFFHRDWDPSYKAD-TYRYDLLCESLKDL 119
Query: 243 SLRRIVTM---EEIGLRSLLGKCKSLEKLCLH 271
L +VT EIGLR LLGKCK+LE+LCL
Sbjct: 120 RLAHLVTEPEGPEIGLRFLLGKCKALERLCLE 151
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.139 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,982,716
Number of extensions: 459524
Number of successful extensions: 1533
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1481
Number of HSP's successfully gapped: 11
Length of query: 390
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 287
Effective length of database: 11,657,759
Effective search space: 3345776833
Effective search space used: 3345776833
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)