BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0129700 Os12g0129700|AK068675
(373 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0129700 Cyclin-like F-box domain containing protein 693 0.0
Os02g0813300 Cyclin-like F-box domain containing protein 202 5e-52
Os02g0812600 Cyclin-like F-box domain containing protein 198 4e-51
Os02g0812500 Cyclin-like F-box domain containing protein 186 3e-47
Os12g0131600 Cyclin-like F-box domain containing protein 178 7e-45
Os02g0813133 Galactose-binding like domain containing protein 161 7e-40
Os08g0150700 Cyclin-like F-box domain containing protein 152 3e-37
Os02g0813166 Cyclin-like F-box domain containing protein 144 8e-35
AK110304 140 2e-33
Os12g0486900 Protein kinase domain containing protein 138 6e-33
Os02g0812700 Cyclin-like F-box domain containing protein 129 4e-30
Os04g0280500 Conserved hypothetical protein 98 1e-20
Os03g0116700 Cyclin-like F-box domain containing protein 66 5e-11
>Os12g0129700 Cyclin-like F-box domain containing protein
Length = 373
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/373 (90%), Positives = 339/373 (90%)
Query: 1 MPTWPVHSILHADVVFLYLSGPNTGNNTGETERYMVSINVQHREAXXXXXXXXXXXXXXX 60
MPTWPVHSILHADVVFLYLSGPNTGNNTGETERYMVSINVQHREA
Sbjct: 1 MPTWPVHSILHADVVFLYLSGPNTGNNTGETERYMVSINVQHREAISISKLSPDDSSPPP 60
Query: 61 XXXXXXXXXXINKRSGREKGGDNVTVRTNKKAEYISGLSEDCLALAISLTTPMDACRCCA 120
INKRSGREKGGDNVTVRTNKKAEYISGLSEDCLALAISLTTPMDACRCCA
Sbjct: 61 RYFPSSFNSYINKRSGREKGGDNVTVRTNKKAEYISGLSEDCLALAISLTTPMDACRCCA 120
Query: 121 VSRAFQKAANSDSVWRHFLPKDYLSILARADDRVHFTSEKKLLVSLVKDHVLLDQHSKSL 180
VSRAFQKAANSDSVWRHFLPKDYLSILARADDRVHFTSEKKLLVSLVKDHVLLDQHSKSL
Sbjct: 121 VSRAFQKAANSDSVWRHFLPKDYLSILARADDRVHFTSEKKLLVSLVKDHVLLDQHSKSL 180
Query: 181 WLERTSLAKCYLLSSRSLPIAWEDHPLKWRWISLPDSRFEEVTELLKVCWLDLCGRVNCR 240
WLERTSLAKCYLLSSRSLPIAWEDHPLKWRWISLPDSRFEEVTELLKVCWLDLCGRVNCR
Sbjct: 181 WLERTSLAKCYLLSSRSLPIAWEDHPLKWRWISLPDSRFEEVTELLKVCWLDLCGRVNCR 240
Query: 241 ELSPNTEYAAYLVFKLTDDSYGLDCQTQEADITMDDQVVSAKRTISFYXXXXXXXXXSTR 300
ELSPNTEYAAYLVFKLTDDSYGLDCQTQEADITMDDQVVSAKRTISFY STR
Sbjct: 241 ELSPNTEYAAYLVFKLTDDSYGLDCQTQEADITMDDQVVSAKRTISFYPRPRPRPRPSTR 300
Query: 301 ETLSNMGRIEEAGQAEEPSYPRERGDGWLEVQLGHFYNDLEDTGVVVIRLKEHIQLNWKK 360
ETLSNMGRIEEAGQAEEPSYPRERGDGWLEVQLGHFYNDLEDTGVVVIRLKEHIQLNWKK
Sbjct: 301 ETLSNMGRIEEAGQAEEPSYPRERGDGWLEVQLGHFYNDLEDTGVVVIRLKEHIQLNWKK 360
Query: 361 GLILEGMEIRHNI 373
GLILEGMEIRHNI
Sbjct: 361 GLILEGMEIRHNI 373
>Os02g0813300 Cyclin-like F-box domain containing protein
Length = 297
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 160/283 (56%), Gaps = 8/283 (2%)
Query: 95 ISGLSEDCLALAISLTTPMDACRCCAVSRAFQKAANSDSVWRHFLPKDYLSILARADDRV 154
I+ L E+ L+ AIS +P DAC AVS AF+ AA+SD+VW FLP++ L LA +
Sbjct: 11 IARLPEELLSAAISRASPRDACHAAAVSPAFRAAADSDAVWASFLPRN-LPDLADGELSP 69
Query: 155 HFTSEKKLLVSLVKDHVLLDQHSKSLWLERTSLAKCYLLSSRSLPIAWEDHPLKWRWISL 214
S+K+L + L LL S+WL+R + AKCY+LS+RSL I W D P WRWI L
Sbjct: 70 APASKKELFLRLSDGPYLLSDRLMSMWLDRETGAKCYMLSARSLVIIWGDTPHYWRWIPL 129
Query: 215 PDSRFEEVTELLKVCWLDLCGRVNCRELSPNTEYAAYLVFKLTDDSYGLDCQTQEADITM 274
DSRF E EL+ VCWL++ GR++ + LSPN+ YAAY+VFK+ D+ YGLD QEA +++
Sbjct: 130 TDSRFAEGAELIDVCWLEIRGRIHSKMLSPNSTYAAYMVFKIADEFYGLDAPFQEASVSL 189
Query: 275 DDQVVSAKRTISFYXXXXXX-------XXXSTRETLSNMGRIEEAGQAEEPSYPRERGDG 327
+ + + Y R E + P++R D
Sbjct: 190 GGRGSTKIVCVQSYDSEDEEVPENYWPMSIGPLLRRRARRRDRRLVLDEGVTVPQKRTDE 249
Query: 328 WLEVQLGHFYNDLEDTGVVVIRLKEHIQLNWKKGLILEGMEIR 370
W+E+++G F N+ + G V L E NWK+GLI++G+EIR
Sbjct: 250 WMELEMGEFINEEGEDGEVCFSLMETKGGNWKRGLIVQGIEIR 292
>Os02g0812600 Cyclin-like F-box domain containing protein
Length = 485
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/278 (41%), Positives = 160/278 (57%), Gaps = 27/278 (9%)
Query: 98 LSEDCLALAISLTTPMDACRCCAVSRAFQKAANSDSVWRHFLPKDYLSILARADDRVHFT 157
L E+ L A+SLT+P DAC AV R F+ AA+SD+VW FLP+D L LA +
Sbjct: 15 LPEELLVAALSLTSPRDACSAAAVCRDFRAAADSDAVWSRFLPRD-LPRLADGELSPPPP 73
Query: 158 SEKKLLVSLVKDHVLLDQHSKSLWLERTSLAKCYLLSSRSLPIAWEDHPLKWRWISLPDS 217
S K L + L +LL S+WLER KCY+LS+R+L I W D P WRWI L DS
Sbjct: 74 STKGLFLRLSAAPLLLPHELTSMWLEREKGGKCYMLSARALQITWGDTPRYWRWIPLTDS 133
Query: 218 RFEEVTELLKVCWLDLCGRVNCRELSPNTEYAAYLVFKLTDDSYGLDCQTQEADITMDDQ 277
R E ELL VCWL++ G++ + LS NT YAAYLV+++ D SYGLD QEA +++
Sbjct: 134 RLEGA-ELLSVCWLEIHGKILSKMLSRNTNYAAYLVYRIADRSYGLDFPFQEASVSIGGS 192
Query: 278 VVSAKRTISFYXXXXXXXXXSTRETLSNMGRIEEAGQ-----AEEPSYPRERGDGWLEVQ 332
+TR+ S R++ AE+ +P++R DGW+E++
Sbjct: 193 T-------------------TTRQVGSVERRLKRRCSHALVLAEDIEHPQKRSDGWMELK 233
Query: 333 LGHFYNDLEDTGVVVIRLKEHIQLNWKKGLILEGMEIR 370
LG YN+ D G V I +E + +WK+GL+++G+EIR
Sbjct: 234 LGELYNEEGDDGEVCISFRE-TEGHWKRGLVVQGIEIR 270
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 168 KDHVLLDQHSKSLWLERTSLAKCYLLSSRSLPIAWEDHPLKWRWISLPD-SRFEEVTELL 226
K+ + L S+WL+ + KCY+LS+R+L +A + WR ISL SRF EV EL
Sbjct: 299 KEEIFLTDGLTSMWLDMETGFKCYMLSARALQLA--NSTDTWRLISLTGASRFSEVIELP 356
Query: 227 KVCWLDLCGRVNCRELSPNTEYAAYLVFKLTDDSYGL 263
L +CG++ C+ L NT YAAY+VF + DDS+GL
Sbjct: 357 ACYELVICGKIPCKMLPGNTNYAAYIVFVVVDDSFGL 393
>Os02g0812500 Cyclin-like F-box domain containing protein
Length = 332
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/317 (40%), Positives = 162/317 (51%), Gaps = 36/317 (11%)
Query: 89 NKKAEYISGLSEDCLALAISLTTPMDACRCCAVSRAFQKAANSDSVWRHFLPKDYLSILA 148
A I L E+C+A AIS+TTP DAC AVS AF+ AA+SD+VW FLP D+ +ILA
Sbjct: 5 GAAAAEIYRLPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHAAILA 64
Query: 149 RADDRV----HFTSEKKLLVSLVKDHVLLDQHSKSLWLERTSLAKCYLLSSRSLPIAWED 204
RADD + S+K L L VLLD + S L+R S AKC +LS+R+L IAW D
Sbjct: 65 RADDGIAAAGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSIAWGD 124
Query: 205 HPLKWRWI-SLPDSRFEEVTELLKVCWLDLCGRVNCRELSPNTEYAAYLVFKLTDDSYGL 263
P +WRW LP SRF EV ELL VCWL++ G++ LSP T YAAYLV+ D + GL
Sbjct: 125 DPSRWRWTPGLPGSRFPEVAELLDVCWLEITGKLQLSLLSPATTYAAYLVYSFADYTTGL 184
Query: 264 DCQTQEADITMDDQVVSAKRTISFYXXXXXXXXXSTRE---TLSNMGRIEEAGQAEE--- 317
+C VVS + +T + L +MG E +E
Sbjct: 185 ECNIGMPTPMATVTVVSGAGGTTSRPPAAPATTTTTEQHKICLQHMGEEETIMHRQELVI 244
Query: 318 -------------PSY----PRER-----GDGWLEVQLGHFYNDLE--DTGVVVIRLKEH 353
P PR R G GW EV+LG F + GVV + KE
Sbjct: 245 RLRKAFGRTVRFDPDMDIRCPRPRDGGGGGGGWREVELGEFAVPAAGGEDGVVEVSFKEE 304
Query: 354 IQLNWKKGLILEGMEIR 370
WK GLI++G+E+R
Sbjct: 305 TG-RWKTGLIVQGIELR 320
>Os12g0131600 Cyclin-like F-box domain containing protein
Length = 185
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 113/158 (71%), Gaps = 7/158 (4%)
Query: 73 KRSGREKGGDNVTV-RTNKKAEY-----ISGLSEDCLALAISLTTPMDACRCCAVSRAFQ 126
K+S RE+ D+V+V + ++A Y IS L E CLA AIS TTP DACRC AVS FQ
Sbjct: 2 KQSRREEVDDDVSVGKKEEEAGYCSSSSISRLPEACLAHAISFTTPTDACRCSAVSADFQ 61
Query: 127 KAANSDSVWRHFLPKDYLSILARADDRVHFT-SEKKLLVSLVKDHVLLDQHSKSLWLERT 185
AA+S++VW FLP DY SILARADD V FT S K+L +SL +DHVLLDQ SKS WLERT
Sbjct: 62 AAASSNAVWERFLPPDYHSILARADDPVDFTTSNKELFLSLAQDHVLLDQRSKSFWLERT 121
Query: 186 SLAKCYLLSSRSLPIAWEDHPLKWRWISLPDSRFEEVT 223
S AKCYLLSSRSL IAW D WRWI LPDSRF T
Sbjct: 122 SGAKCYLLSSRSLEIAWGDDARYWRWIYLPDSRFASQT 159
>Os02g0813133 Galactose-binding like domain containing protein
Length = 472
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 146/276 (52%), Gaps = 45/276 (16%)
Query: 98 LSEDCLALAISLTTPMDACRCCAVSRAFQKAANSDSVWRHFLPKDYLSILARAD---DRV 154
L E+ L +SLT P A + AA+SD+VW FLP+ L LAR +
Sbjct: 14 LPEELLVEVLSLTGP---------RDASRAAADSDAVWSRFLPRG-LPRLARRELPRSPP 63
Query: 155 HFTSEKKLLVSLVKDHVLLDQHSKSLWLERTSLAKCYLLSSRSLPIAWEDHPLKWRWISL 214
S K + L +LL + S+WL+R AKCY+LS+R+L I+W D P W WI L
Sbjct: 64 PPPSRKAHFLRLSAGPLLLPRKLMSMWLDREKGAKCYMLSARALQISWGDSPQYWSWIPL 123
Query: 215 PDSRFEEVTELLKVCWLDLCGRVNCRELSPNTEYAAYLVFKLTDDSYGLDCQTQEADITM 274
DSRF+E ELL VCWL++ G++ ++LS NT YAAYLV+K+ D SYGLD QEA +++
Sbjct: 124 ADSRFKEGAELLSVCWLEIRGKLPGKKLSQNTNYAAYLVYKIADRSYGLDFPFQEASVSI 183
Query: 275 DDQVVSAKRTISFYXXXXXXXXXSTRETLSNMGRIEEAGQAEEPSYPRERGDGWLEVQLG 334
+ A Q ++ P++R DGW+E++LG
Sbjct: 184 GGSIT--------------------------------ARQVKDIENPQKRADGWMELKLG 211
Query: 335 HFYNDLEDTGVVVIRLKEHIQLNWKKGLILEGMEIR 370
YN+ D G V I E +WK GL+++G+EIR
Sbjct: 212 ELYNEEGDDGEVCISFMETKGGHWKSGLVVQGIEIR 247
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 112/217 (51%), Gaps = 34/217 (15%)
Query: 169 DHVLLDQHSKSLWLERTSLAKCYLLSSRSLPIAWEDHPLKWRWISLP-DSRFEEVTELLK 227
+ + L S+WL+R + KCY+LS+R+L I H WRWISL SRF EV E LK
Sbjct: 277 EEIFLSDGLTSMWLDRETGFKCYMLSARALQIVNLTH--SWRWISLTGSSRFSEVVEFLK 334
Query: 228 VCWLDLCGRVNCRELSPNTEYAAYLVFKLTDDSYGLDCQTQEADITMDDQVVSAKRTISF 287
+++CG++ C+ LS N+ YAAY+VF + +DS GL A + + V ++
Sbjct: 335 GYRVEVCGKIPCKMLSGNSNYAAYIVFVVAEDSCGL------ASVWVATVGVGGRQ---- 384
Query: 288 YXXXXXXXXXSTRETL---SNMGRIEEAGQAEEPS-----YPRERGDGWLEVQLGHFYN- 338
STR+ SN G+ E P P+ER DGW+E++LG FYN
Sbjct: 385 ----------STRQVCLDSSNRNDYYYEGEIEVPQDGSVILPQERADGWMELELGEFYNQ 434
Query: 339 DLEDTGVVVIRLKEHIQLNW--KKGLILEGMEIRHNI 373
+ + G V L + W GL+++G+EIR I
Sbjct: 435 EGNNQGEVCFSLVKPKAGRWLSNGGLVIQGIEIRPKI 471
>Os08g0150700 Cyclin-like F-box domain containing protein
Length = 299
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 140/290 (48%), Gaps = 21/290 (7%)
Query: 95 ISGLSEDCLALAISLTTPMDACRCCAVSRAFQKAANSDSVWRHFLPKDYLSILARADDRV 154
+ L E CLA I+LT+P DACR AVS +F+ AA SD+VW FLP DY +I
Sbjct: 20 VGDLPEACLADVIALTSPRDACRLAAVSPSFRAAAESDAVWDRFLPPDYRAIAPLPPPPA 79
Query: 155 HFTS------EKKLLVSLVKDHVLLDQHSKSLWLERTSLAKCYLLSSRSLPIAWEDHPLK 208
+ +K + + L V +D S +WLE+ S AKC+ L +R L + WED
Sbjct: 80 TAAASGGKRMKKGVYLGLCDKPVPVDDGSMMVWLEKESGAKCFALPARKLSLPWEDGEFS 139
Query: 209 WRWISLPDSRFEEVTELLKVCWLDLCGRVNCRELSPNTEYAAYLVF---KLTDDSYGLDC 265
WRW P SRFEEV +L+ LD+ GR+ L+P T YAAYLVF + GL
Sbjct: 140 WRWTPHPLSRFEEVAQLVDCTCLDIYGRLPAAALTPATPYAAYLVFGTAAAAEGHRGLSF 199
Query: 266 QTQEADITMDDQVVSAKRTISFYXXXXXXXXXSTRETLSNMGRIEEAGQAEEPSYPRERG 325
QE ++ +A R ++ + R+ + AG P RG
Sbjct: 200 PDQETTVS------AAGRVVARHAVCLRPDDAEARKFRG----VGLAGAGVPVRRPARRG 249
Query: 326 DGWLEVQLGHFYND--LEDTGVVVIRLKEHIQLNWKKGLILEGMEIRHNI 373
DGW E++LG D G V+ E + K+GL++E ME R +
Sbjct: 250 DGWSEMELGRVAADEVAGAGGEDVVASFEVLGWYPKRGLVVECMEFRPVV 299
>Os02g0813166 Cyclin-like F-box domain containing protein
Length = 262
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 143/282 (50%), Gaps = 39/282 (13%)
Query: 95 ISGLSEDCLALAISLTTPM--DACRCCAVSRAFQKAANSDSVWRHFLPKDYLSILARADD 152
I+ L + L+ IS P DACR AVS AF+ AA+SD VW FLP+D + LA +
Sbjct: 8 IARLPVELLSAVISRAAPRPRDACRASAVSPAFRAAADSDDVWSRFLPRD-VPDLADGEL 66
Query: 153 RVHFTSEKKLLVSLVKDH---VLLDQHSKSLWLERTSLAKCYLLSSRSLPIAWEDHPLKW 209
S K L + L LL + +W +R + AKCY+LS+R+L I +
Sbjct: 67 SPPPPSNKALFLRLSGSDGNVPLLPDRLRGIWFDRETGAKCYVLSARTLVIKCSETSDYR 126
Query: 210 RWISLPDSRFEEVTELLKV-CWLDLCGRVNCRELSPNTEYAAYLVFKLTDDSYGLDCQTQ 268
RWI L DSRF E E + +++ +++ L+PN+ YAA++VFK+ D Y LD
Sbjct: 127 RWIPLADSRFAEAVEFMDAPPRMEIRSKIDSMVLTPNSTYAAFMVFKIADGLYELDTSPH 186
Query: 269 EADITMDDQVVSAKRTISFYXXXXXXXXXSTRETLSNMGRIEEAGQAEEPSYPRERGDGW 328
+A +++ + ++R ++F GR YP R DGW
Sbjct: 187 DATVSIGEN--ESRREVAF------------------TGR-----------YPERRADGW 215
Query: 329 LEVQLGHFYNDLEDTGVVVIRLKEHIQLNWKKGLILEGMEIR 370
+EV+LG F+N+ + G V +RL N +GLI+ G+EIR
Sbjct: 216 MEVELGEFFNEDGEDGAVYMRLMSE-GPNRMRGLIVLGIEIR 256
>AK110304
Length = 173
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 106/189 (56%), Gaps = 22/189 (11%)
Query: 182 LERTSLAKCYLLSSRSLPIAWEDHPLKWRWISLPDSRFEEVTELLKVCWLDLCGRVNCRE 241
L+R + AKCY+LS+R+L I W P WRWI L DSRF E ELL VCWL++ G ++ R
Sbjct: 1 LDRETGAKCYVLSARALVIIWTCTPRYWRWIPLTDSRFTEAAELLSVCWLEILGNIDSRM 60
Query: 242 LSPNTEYAAYLVFKLTDDSYGLDCQTQEADITMDDQVVSAKRTISFYXXXXXXXXXSTRE 301
LSPN+ YAA LVFK+ ++ Y LD T +A + + S+RE
Sbjct: 61 LSPNSTYAAVLVFKIAEEFYQLD--TIDATVNLGGS-------------------KSSRE 99
Query: 302 TLSNMGRIEEAGQAEEPSYPRERGDGWLEVQLGHFYNDLEDTGVVVIRLKEHIQLNWKKG 361
R + +PR R DGW+EV+LG F+N+ + G V IR+ NWKKG
Sbjct: 100 VALTRSRRRPEEEISAVLFPRTRADGWMEVELGEFFNEEGEDGNVNIRIFGK-GPNWKKG 158
Query: 362 LILEGMEIR 370
LI+ G+EIR
Sbjct: 159 LIVLGIEIR 167
>Os12g0486900 Protein kinase domain containing protein
Length = 449
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 20/198 (10%)
Query: 178 KSLWLERTSLAKCYLLSSRSLPIAWEDHPLKWRWISLPDSRFEEVTELLKVCWLDLCGRV 237
KS WL+ TS AKCY+LSSR L + W + P W+WI+LPDSRF E ELL V WL + G +
Sbjct: 268 KSFWLDATSNAKCYMLSSRLLKVTWGESPEHWKWITLPDSRFAECAELLNVYWLAVIGEI 327
Query: 238 NCRELSPNTEYAAYLVFKLTDDSYGL-DCQTQEADITMDDQVVSAKRTISFYXXXXXXXX 296
+L+P T YA YLV+KLT S GL QTQ + + + ++ + +S
Sbjct: 328 ATEDLTPGTRYAVYLVYKLTGTSVGLRGGQTQRSSLRLYGEITVSTGKVSV--------- 378
Query: 297 XSTRETLSNMGRIEEAGQAEEPSYPRERGDGWLEVQLGHFYNDLEDTG--VVVIRLKEHI 354
+ + R AG A YP RGDGW+E++L F D + G V++ +E
Sbjct: 379 ----DVVPAAARGMAAGVA----YPVARGDGWMELKLAEFAADEKLLGEKKVIVDFREEN 430
Query: 355 QLNWKKGLILEGMEIRHN 372
K GL++EGME R N
Sbjct: 431 DHVKKSGLVIEGMEFRPN 448
>Os02g0812700 Cyclin-like F-box domain containing protein
Length = 225
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 128/277 (46%), Gaps = 62/277 (22%)
Query: 94 YISGLSEDCLALAISLTTPMDACRCCAVSRAFQKAANSDSVWRHFLPKDYLSILARADDR 153
+I L +D L I L TP DACR AVS AF+ A+SD VW F P D S L AD
Sbjct: 5 WIDRLPQDVLQRVIPLETPRDACRAAAVSPAFRAIADSDVVWGKFQPDD--SSLQLADGE 62
Query: 154 VHFTSEKKLLVSLVKDHVLLDQHSKSLWLERTSLAKCYLLSSRSLPIAWEDHPLKWRWIS 213
+ K K L+S P A+ +
Sbjct: 63 LFPPPRSK---------------------------KERFLAS---PPAYSSFQIG----- 87
Query: 214 LPDSRFEEVTELLKVCWLDLCGRVNCRELSPNTEYAAYLVFKLTDDSYGLDCQTQEADIT 273
S FEE EL+ VCW+++ ++ + LSPN+ YAA++VFK+ + YGLD QE ++
Sbjct: 88 ---SGFEEGAELIDVCWMEIRCNIDSKMLSPNSTYAAFMVFKIAEGFYGLDTPLQEGTVS 144
Query: 274 MDDQVVSAKRTISFYXXXXXXXXXSTRETLSNMGRIEEAGQAEEPSYPRERGDGWLEVQL 333
+ + ++R ++F S +YP++R DGW+EV+L
Sbjct: 145 LGGR--ESRREVAFTSIDPRPPQGSA-------------------AYPQKRADGWMEVEL 183
Query: 334 GHFYNDLEDTGVVVIRLKEHIQLNWKKGLILEGMEIR 370
G F+N+ + G V I L NWK+GLI+ G+EIR
Sbjct: 184 GEFFNENGEDGEVGISLMSK-GPNWKRGLIVLGIEIR 219
>Os04g0280500 Conserved hypothetical protein
Length = 323
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 94/189 (49%), Gaps = 24/189 (12%)
Query: 98 LSEDCLALAISLTTPMDACRCCAVSRAFQKAANSDSVWRHFLPKDYLSILARADDRV--- 154
L DC+A SLT+P DACR A + A + A+SD VW FLP ++ D +
Sbjct: 18 LPMDCIACIASLTSPGDACRLAAAAAALRPVADSDDVWGSFLPPEWAGDGDALDGKPGGR 77
Query: 155 HFTSEKKLLVSLVKDHVLLDQHS---------------KSLWLERTSLAKCYLLSSRSLP 199
S+K++ + L VLLD +S LE+ S AK Y++ +R+L
Sbjct: 78 EGESKKEMFLRLCDLPVLLDGGKLYWAFSSLISLLSLHQSFSLEKRSGAKKYMMRARALG 137
Query: 200 IAWEDHPLKWR-WI-SLPDSRFEEVTELLKVCWLDLCGRVNCRELSPNTEYAAYLVFKL- 256
W +P WI + PDSRF EV L +CWLD+ G N + LS T Y AYLV+ +
Sbjct: 138 FGWSGYPYGGLVWIQNHPDSRFSEVAILSHLCWLDIYGIFNTKHLSNGTSYGAYLVYNVQ 197
Query: 257 ---TDDSYG 262
T+D G
Sbjct: 198 FLHTEDQNG 206
>Os03g0116700 Cyclin-like F-box domain containing protein
Length = 297
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 10/171 (5%)
Query: 98 LSEDCLALAISLTTPMDACRCCAVSRAFQKAANSDSVWRHFLPKDYLSILARADDRVHFT 157
L E C A + + CR ++RAF+ AA +D VW LP++Y +L D +
Sbjct: 27 LPELCAAEVLLHLDAPEICRLARLNRAFRGAAAADFVWEAKLPENYGYLLDFVDGAMEGG 86
Query: 158 SE--------KKLLVSLVKDHVLLDQHSKSLWLERTSLAKCYLLSSRSLPIAWEDHPLKW 209
KK + + + V D K LWLE++ C LSS+SL I D W
Sbjct: 87 GGGRERSVMGKKEVYARLAKAVPFDGGKKELWLEKSKGGVCIALSSKSLVITGIDDRRYW 146
Query: 210 RWISLPDSRFEEVTELLKVCWLDLCGRVNCRELSPNTEYAAYLVFKLTDDS 260
+ +SRF V L ++ W ++ G + P Y+ Y L S
Sbjct: 147 SHMPTTESRFHSVAYLQQIWWFEVVGELEF--CFPAGTYSLYFRLHLGKAS 195
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,777,916
Number of extensions: 438843
Number of successful extensions: 1115
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 1085
Number of HSP's successfully gapped: 18
Length of query: 373
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 271
Effective length of database: 11,709,973
Effective search space: 3173402683
Effective search space used: 3173402683
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)