BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0134700 Os11g0134700|AK064966
(341 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0134700 Similar to Metacaspase 7 (Metacaspase 4) 615 e-176
Os01g0799900 Similar to Latex-abundant protein 180 1e-45
Os05g0496500 Similar to Latex-abundant protein 180 2e-45
Os05g0496400 Peptidase C14, caspase catalytic domain contai... 176 2e-44
Os03g0389400 Zinc finger, LSD1-type domain containing protein 86 4e-17
Os03g0389000 Peptidase C14, caspase catalytic domain contai... 84 2e-16
Os03g0389100 Peptidase C14, caspase catalytic domain contai... 71 1e-12
>Os11g0134700 Similar to Metacaspase 7 (Metacaspase 4)
Length = 341
Score = 615 bits (1586), Expect = e-176, Method: Compositional matrix adjust.
Identities = 306/341 (89%), Positives = 306/341 (89%)
Query: 1 MERGQKKKLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPV 60
MERGQKKKLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPV
Sbjct: 1 MERGQKKKLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPV 60
Query: 61 LPTGANIKRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGECDEAIVPCDFNLI 120
LPTGANIKRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGECDEAIVPCDFNLI
Sbjct: 61 LPTGANIKRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGECDEAIVPCDFNLI 120
Query: 121 TDVDFRRLVDRVPRGASFTMVSDSCHSGGLIDLEKEQIGPSVLXXXXXXXXXXXXXXXXX 180
TDVDFRRLVDRVPRGASFTMVSDSCHSGGLIDLEKEQIGPSVL
Sbjct: 121 TDVDFRRLVDRVPRGASFTMVSDSCHSGGLIDLEKEQIGPSVLAAGAAPAAAAASTTATR 180
Query: 181 XXXXRFLPYAAVVEHLSGVSGXXXXXXXXXXXXXXFGADASAKFHRDAEQPVRTDDDGIL 240
RFLPYAAVVEHLSGVSG FGADASAKFHRDAEQPVRTDDDGIL
Sbjct: 181 ATAARFLPYAAVVEHLSGVSGVDAAHHVADHLLALFGADASAKFHRDAEQPVRTDDDGIL 240
Query: 241 LSGCQTDETSADVPGDDEVAAGGKACGAFSNAIQTVLASHPAPVSNRQLVSMARAVLSDQ 300
LSGCQTDETSADVPGDDEVAAGGKACGAFSNAIQTVLASHPAPVSNRQLVSMARAVLSDQ
Sbjct: 241 LSGCQTDETSADVPGDDEVAAGGKACGAFSNAIQTVLASHPAPVSNRQLVSMARAVLSDQ 300
Query: 301 GFEQHPCLYCSDGNAETPFLWQEEDKKKTVTAAAEQAMTAL 341
GFEQHPCLYCSDGNAETPFLWQEEDKKKTVTAAAEQAMTAL
Sbjct: 301 GFEQHPCLYCSDGNAETPFLWQEEDKKKTVTAAAEQAMTAL 341
>Os01g0799900 Similar to Latex-abundant protein
Length = 417
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 104/156 (66%), Gaps = 1/156 (0%)
Query: 7 KKLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPVLPTGAN 66
+K A LVG NY GT EL+GC NDV M LV RFGF D+ VL D S PTGAN
Sbjct: 3 RKRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQPTGAN 62
Query: 67 IKRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGECDEAIVPCDFNLITDVDFR 126
I+RALA +V A PGD LFFHYSGHGT +P G+ G DE IVP D NLITD DFR
Sbjct: 63 IRRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTG-YDECIVPSDMNLITDQDFR 121
Query: 127 RLVDRVPRGASFTMVSDSCHSGGLIDLEKEQIGPSV 162
LV +VP G FT+VSDSCHSGGL+D KEQIG S
Sbjct: 122 ELVQKVPNGCLFTIVSDSCHSGGLLDSAKEQIGNST 157
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Query: 236 DDGILLSGCQTDETSADVPGDDEVAAGGKACGAFSNAIQTVLASHPAPVSNRQLVSMARA 295
++GIL+SGCQ+++TSAD G + GA SNAIQT+LA VSN+ LV AR+
Sbjct: 337 NNGILISGCQSNQTSADA-----TTPQGSSYGALSNAIQTILADKRGNVSNKDLVMKARS 391
Query: 296 VLSDQGFEQHPCLYCSDGNAETPFL 320
+L+ QG+ Q P LYCSD + F+
Sbjct: 392 LLAKQGYTQQPGLYCSDDHVHVSFI 416
>Os05g0496500 Similar to Latex-abundant protein
Length = 420
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/157 (61%), Positives = 108/157 (68%), Gaps = 3/157 (1%)
Query: 7 KKLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTD-DRGSPVLPTGA 65
+K A LVG NY GT EL+GC NDVA MR ALV RFGF AD+ VL D DR +P PTGA
Sbjct: 4 RKRALLVGINYPGTKAELKGCHNDVARMRRALVDRFGFDEADIRVLADADRSAPQ-PTGA 62
Query: 66 NIKRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGECDEAIVPCDFNLITDVDF 125
NI+R LA +V A PGD LFFHYSGHGT +P G+ G DE IVP D NLITD DF
Sbjct: 63 NIRRELARLVGDARPGDFLFFHYSGHGTRLPAETGQDDDTG-YDECIVPSDMNLITDQDF 121
Query: 126 RRLVDRVPRGASFTMVSDSCHSGGLIDLEKEQIGPSV 162
LV +VP FT+VSDSCHSGGL+D KEQIG S
Sbjct: 122 TELVQKVPDDCLFTIVSDSCHSGGLLDKTKEQIGHST 158
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Query: 237 DGILLSGCQTDETSADVPGDDEVAAGGKACGAFSNAIQTVLASHPAPVSNRQLVSMARAV 296
+G+L+SGCQTD+TSAD G + GA SNAIQT+L+ V+N++LV AR +
Sbjct: 341 NGVLISGCQTDQTSADA-----TTPKGVSYGALSNAIQTILSEKSGRVTNKELVLRAREL 395
Query: 297 LSDQGFEQHPCLYCSDGNAETPFL 320
LS QG+ Q P LYCSD + F+
Sbjct: 396 LSKQGYTQQPGLYCSDKHTSVAFI 419
>Os05g0496400 Peptidase C14, caspase catalytic domain containing protein
Length = 409
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 102/156 (65%)
Query: 7 KKLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPVLPTGAN 66
+K A LVG NYAGT EL+GC+NDVA MR LV RFGF AD+ VL D S PTGAN
Sbjct: 3 RKRAVLVGINYAGTEGELKGCLNDVARMRRCLVDRFGFDEADIRVLADADPSTPQPTGAN 62
Query: 67 IKRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGECDEAIVPCDFNLITDVDFR 126
I+ L +V A PGD LFFHYSGHG +P G DE IVPCD NLI D DF
Sbjct: 63 IRLELERLVGDARPGDTLFFHYSGHGLQLPIETGGDDDDTGYDECIVPCDMNLIKDQDFT 122
Query: 127 RLVDRVPRGASFTMVSDSCHSGGLIDLEKEQIGPSV 162
LV +VP G FTMVSDSCHSGGLID KEQIG S
Sbjct: 123 ELVQKVPDGCLFTMVSDSCHSGGLIDKTKEQIGSST 158
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 237 DGILLSGCQTDETSADVPGDDEVAAGGKACGAFSNAIQTVLAS-HPAPVSNRQLVSMARA 295
+G+L+SGCQTDETSAD G + GA S+AIQ+VLA V+N +LV AR
Sbjct: 329 NGVLISGCQTDETSADA-----TTPEGVSYGALSDAIQSVLAEERRGKVTNMELVRRARE 383
Query: 296 VLSDQGFEQHPCLYCSDGNAETPFL 320
+L+ QG+ Q P LYC D +A F+
Sbjct: 384 LLAKQGYTQQPGLYCRDKHANVAFI 408
>Os03g0389400 Zinc finger, LSD1-type domain containing protein
Length = 369
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 3 RGQKKKLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPAD-VTVLTDDRGSPV- 60
R KK A LVG +YA T EL+G +NDV M L RF F PAD + VLT + G P
Sbjct: 84 RVSGKKRALLVGISYAATGYELKGTVNDVNCMSFLLRERFAF-PADCILVLTQENGDPYR 142
Query: 61 LPTGANIKRALADMVARAAPGDVLFFHYSGHGTLVPPVKG-RRHGHGECDEAIVPCDFN- 118
+PT AN+ A+ +V + GD L H+SGHG V G G+ DEA+ P DF
Sbjct: 143 VPTRANLLAAMRWLVEGCSAGDSLVLHFSGHGVQKLDVDGDEADGY---DEALCPVDFER 199
Query: 119 --LITDVDFRRLVDR-VPRGASFTMVSDSCHSGGLIDL 153
+I D + + R + G + D+CHSG ++DL
Sbjct: 200 AGVILDDEINETIVRPLVAGVKLHAIVDTCHSGTILDL 237
>Os03g0389000 Peptidase C14, caspase catalytic domain containing protein
Length = 400
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 7 KKLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGS---PVLPT 63
+K A LVG +Y G+ EL+G +NDV MR L FGF + VLT++ G PT
Sbjct: 108 RKRALLVGVSYKGSSYELEGTVNDVDCMRRLLGESFGFPADSILVLTEELGEGDPSRSPT 167
Query: 64 GANIKRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRR-HGHGECDEAIVPCDF----N 118
AN+ A+ +V GD L FH+SGHG V G G+ +EA+ P DF
Sbjct: 168 RANLLAAMRWLVEGCDAGDSLVFHFSGHGVQKLDVNGDEVDGY---NEALCPVDFERSGK 224
Query: 119 LITDVDFRRLVDRVPRGASFTMVSDSCHSGGLIDL 153
++ D +V + GA + D+CHSG ++DL
Sbjct: 225 ILDDEINETIVRPLVAGAKLHAIVDTCHSGTILDL 259
>Os03g0389100 Peptidase C14, caspase catalytic domain containing protein
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 19/158 (12%)
Query: 8 KLATLVGCNYAG-TPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGS--PV-LPT 63
K A LVG +Y G T EL G DV M ++L+ +F F + +LT++ G+ P+ PT
Sbjct: 8 KRALLVGVSYKGDTSRELTGAAEDVKNM-NSLLKKFLFPEESIHMLTEELGAKDPLKAPT 66
Query: 64 GANIKRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGE----CDEAIVPCDF-- 117
NI + + +V GD L FH+SGHG + R+ +G+ DE + P D+
Sbjct: 67 RENIMKEMRWLVEGCRAGDSLVFHFSGHG------RQRKDDNGDEVDGRDEELCPVDYKV 120
Query: 118 --NLITDVDFRRLVDRVPRGASFTMVSDSCHSGGLIDL 153
N++ D +V + +G + D+CHSG ++DL
Sbjct: 121 SGNILDDDINDAIVKPLTQGVKLHAIIDTCHSGTMLDL 158
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,347,171
Number of extensions: 467500
Number of successful extensions: 1216
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1204
Number of HSP's successfully gapped: 10
Length of query: 341
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 239
Effective length of database: 11,709,973
Effective search space: 2798683547
Effective search space used: 2798683547
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)