BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0120200 Os11g0120200|AK101734
(708 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0120200 Protein of unknown function DUF936, plant fami... 1193 0.0
Os12g0120000 Protein of unknown function DUF936, plant fami... 1172 0.0
Os09g0516700 Protein of unknown function DUF936, plant fami... 104 2e-22
Os03g0181800 Protein of unknown function DUF936, plant fami... 102 1e-21
Os08g0541500 Protein of unknown function DUF936, plant fami... 100 4e-21
Os04g0468700 91 2e-18
Os01g0108800 Protein of unknown function DUF936, plant fami... 72 2e-12
Os07g0588300 Protein of unknown function DUF936, plant fami... 67 3e-11
>Os11g0120200 Protein of unknown function DUF936, plant family protein
Length = 708
Score = 1193 bits (3087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/708 (86%), Positives = 615/708 (86%)
Query: 1 MATVTPGVLLKLLQAMHTDDRVAGDHRSPVLQVTAVVPALTASTADSLWPSNGFLLQLSD 60
MATVTPGVLLKLLQAMHTDDRVAGDHRSPVLQVTAVVPALTASTADSLWPSNGFLLQLSD
Sbjct: 1 MATVTPGVLLKLLQAMHTDDRVAGDHRSPVLQVTAVVPALTASTADSLWPSNGFLLQLSD 60
Query: 61 GLHSTYVQPSSADADALVSARPQLVGHLVHLDRLRFARPVPRAVGIXXXXXXXXXXFVGN 120
GLHSTYVQPSSADADALVSARPQLVGHLVHLDRLRFARPVPRAVGI FVGN
Sbjct: 61 GLHSTYVQPSSADADALVSARPQLVGHLVHLDRLRFARPVPRAVGIRPVPSSRSVSFVGN 120
Query: 121 PEPLVARPAACSRGYVIQPGSHSDSAPPLMPSSSGNAVQSDATDAVKRIVLXXXXXXXXX 180
PEPLVARPAACSRGYVIQPGSHSDSAPPLMPSSSGNAVQSDATDAVKRIVL
Sbjct: 121 PEPLVARPAACSRGYVIQPGSHSDSAPPLMPSSSGNAVQSDATDAVKRIVLAPKSVSEAA 180
Query: 181 XXXXXXXXXRRFSSPAPSKQRDPSPSVKGGASRPSSPSVKGASRASSPAVRGTPRATSPA 240
RRFSSPAPSKQRDPSPSVKGGASRPSSPSVKGASRASSPAVRGTPRATSPA
Sbjct: 181 PPPAVSAAKRRFSSPAPSKQRDPSPSVKGGASRPSSPSVKGASRASSPAVRGTPRATSPA 240
Query: 241 PSKCVVPSLVSAKEENRRTAREPAIIVPSRYRQPSPVXXXXXXXXXXXXXXXXXXXXXXX 300
PSKCVVPSLVSAKEENRRTAREPAIIVPSRYRQPSPV
Sbjct: 241 PSKCVVPSLVSAKEENRRTAREPAIIVPSRYRQPSPVGGRRGAASPAPGGRRASLSPSSR 300
Query: 301 XXXXXXXXKKKVGVLVAGISKMTDLTNGSAVKPGRKSWDNTSIAAAAGXXXXXXXXXXXX 360
KKKVGVLVAGISKMTDLTNGSAVKPGRKSWDNTSIAAAAG
Sbjct: 301 RLSGEGSSKKKVGVLVAGISKMTDLTNGSAVKPGRKSWDNTSIAAAAGSVMKSKVKVDKS 360
Query: 361 TILRTQEAMARRLSDVTTELSSNDDDSSVDEKPKPRKKIESPAVKTKAMAPKIMLHDPKW 420
TILRTQEAMARRLSDVTTELSSNDDDSSVDEKPKPRKKIESPAVKTKAMAPKIMLHDPKW
Sbjct: 361 TILRTQEAMARRLSDVTTELSSNDDDSSVDEKPKPRKKIESPAVKTKAMAPKIMLHDPKW 420
Query: 421 TDGSIPLDGVSDVLSKMGKEXXXXXXXXXXXXXXXXXXXXXXESVIRNLSKFSELTSASK 480
TDGSIPLDGVSDVLSKMGKE ESVIRNLSKFSELTSASK
Sbjct: 421 TDGSIPLDGVSDVLSKMGKEATERRDAAAIAAADALQEALITESVIRNLSKFSELTSASK 480
Query: 481 TSNPLPTVDIFLAVYEDTLKWKKIAESISTNRTETASWENSATHWVEAALATDLEVLKLM 540
TSNPLPTVDIFLAVYEDTLKWKKIAESISTNRTETASWENSATHWVEAALATDLEVLKLM
Sbjct: 481 TSNPLPTVDIFLAVYEDTLKWKKIAESISTNRTETASWENSATHWVEAALATDLEVLKLM 540
Query: 541 NKAPESLSRKRGADKPKAPSVVEAPRTTISKRQSHGTSAKVQSKVLPTSTASCAWNKTQG 600
NKAPESLSRKRGADKPKAPSVVEAPRTTISKRQSHGTSAKVQSKVLPTSTASCAWNKTQG
Sbjct: 541 NKAPESLSRKRGADKPKAPSVVEAPRTTISKRQSHGTSAKVQSKVLPTSTASCAWNKTQG 600
Query: 601 VNETAELATTLCREMHTWFLKFVDEAMDLGFHLFEDQNVASRGKQSSHITMVLSQFKKIS 660
VNETAELATTLCREMHTWFLKFVDEAMDLGFHLFEDQNVASRGKQSSHITMVLSQFKKIS
Sbjct: 601 VNETAELATTLCREMHTWFLKFVDEAMDLGFHLFEDQNVASRGKQSSHITMVLSQFKKIS 660
Query: 661 DWLDGVGKIAEEATTKDKVEQLKCKIYGFVINHMGSAFDSSVSISSRN 708
DWLDGVGKIAEEATTKDKVEQLKCKIYGFVINHMGSAFDSSVSISSRN
Sbjct: 661 DWLDGVGKIAEEATTKDKVEQLKCKIYGFVINHMGSAFDSSVSISSRN 708
>Os12g0120000 Protein of unknown function DUF936, plant family protein
Length = 708
Score = 1172 bits (3031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/708 (85%), Positives = 609/708 (86%)
Query: 1 MATVTPGVLLKLLQAMHTDDRVAGDHRSPVLQVTAVVPALTASTADSLWPSNGFLLQLSD 60
MATVTPGVLLKLLQAMHTDDRVAGDHRSPVLQVTAVVPALTASTADSLWPSNGFLLQLSD
Sbjct: 1 MATVTPGVLLKLLQAMHTDDRVAGDHRSPVLQVTAVVPALTASTADSLWPSNGFLLQLSD 60
Query: 61 GLHSTYVQPSSADADALVSARPQLVGHLVHLDRLRFARPVPRAVGIXXXXXXXXXXFVGN 120
GLHSTYVQPSSADADALVSARPQLVGHLVHLDRLRFARPVPRAVGI FVGN
Sbjct: 61 GLHSTYVQPSSADADALVSARPQLVGHLVHLDRLRFARPVPRAVGIRPVPSSRSVSFVGN 120
Query: 121 PEPLVARPAACSRGYVIQPGSHSDSAPPLMPSSSGNAVQSDATDAVKRIVLXXXXXXXXX 180
PEPLVARPAACSRGYVIQPGSHSD+APPLMPSSSGNA QSDAT+A+ R VL
Sbjct: 121 PEPLVARPAACSRGYVIQPGSHSDAAPPLMPSSSGNAAQSDATNAINRTVLAHKNVPEAA 180
Query: 181 XXXXXXXXXRRFSSPAPSKQRDPSPSVKGGASRPSSPSVKGASRASSPAVRGTPRATSPA 240
RRFSSPAPSKQRDPSPSVKGGASRPSSPSVKGASRASSPAVRGTPRATSPA
Sbjct: 181 PPPAVSAAKRRFSSPAPSKQRDPSPSVKGGASRPSSPSVKGASRASSPAVRGTPRATSPA 240
Query: 241 PSKCVVPSLVSAKEENRRTAREPAIIVPSRYRQPSPVXXXXXXXXXXXXXXXXXXXXXXX 300
PSKCVVPSLV+AKEENRRTAREPAIIVPSRYRQPSPV
Sbjct: 241 PSKCVVPSLVAAKEENRRTAREPAIIVPSRYRQPSPVGGRRGAGSPAPGGRRASLSPSSR 300
Query: 301 XXXXXXXXKKKVGVLVAGISKMTDLTNGSAVKPGRKSWDNTSIAAAAGXXXXXXXXXXXX 360
KKKVGVLVAGISKMTDLTNGSAVKPGRKSWDNTSIAAAAG
Sbjct: 301 RLSGEGSSKKKVGVLVAGISKMTDLTNGSAVKPGRKSWDNTSIAAAAGSVMKSKVKVDKS 360
Query: 361 TILRTQEAMARRLSDVTTELSSNDDDSSVDEKPKPRKKIESPAVKTKAMAPKIMLHDPKW 420
TILRTQEAMARRLSDVTTELSSNDDDSSVDEKPKPRKKIESPAVKTKAMAPKIMLHDPKW
Sbjct: 361 TILRTQEAMARRLSDVTTELSSNDDDSSVDEKPKPRKKIESPAVKTKAMAPKIMLHDPKW 420
Query: 421 TDGSIPLDGVSDVLSKMGKEXXXXXXXXXXXXXXXXXXXXXXESVIRNLSKFSELTSASK 480
TDGSIPLDGVSDVLSKMGKE ESVIRNLSKFSELTSASK
Sbjct: 421 TDGSIPLDGVSDVLSKMGKEATERRDAAAIAAADALQEALITESVIRNLSKFSELTSASK 480
Query: 481 TSNPLPTVDIFLAVYEDTLKWKKIAESISTNRTETASWENSATHWVEAALATDLEVLKLM 540
TSNPLPTVDIFLAVYEDTLKWKKIAESISTNRTETASWENS THWVEAALATDLEVLKLM
Sbjct: 481 TSNPLPTVDIFLAVYEDTLKWKKIAESISTNRTETASWENSVTHWVEAALATDLEVLKLM 540
Query: 541 NKAPESLSRKRGADKPKAPSVVEAPRTTISKRQSHGTSAKVQSKVLPTSTASCAWNKTQG 600
NKAPESLSRKRGADKPKAP VVEAPRTTISKRQSHGTSAKVQSKVLPTS+ASCAWNKTQG
Sbjct: 541 NKAPESLSRKRGADKPKAPLVVEAPRTTISKRQSHGTSAKVQSKVLPTSSASCAWNKTQG 600
Query: 601 VNETAELATTLCREMHTWFLKFVDEAMDLGFHLFEDQNVASRGKQSSHITMVLSQFKKIS 660
VNETAELATTLC EMHTWFLKFVDEAMDLGFHLFEDQNVASRGKQSSHITMVLSQFKKIS
Sbjct: 601 VNETAELATTLCCEMHTWFLKFVDEAMDLGFHLFEDQNVASRGKQSSHITMVLSQFKKIS 660
Query: 661 DWLDGVGKIAEEATTKDKVEQLKCKIYGFVINHMGSAFDSSVSISSRN 708
DWLDGVGKIAEEATTKDKVEQLKCKIYGFVINHMGSAFDSSVSISSRN
Sbjct: 661 DWLDGVGKIAEEATTKDKVEQLKCKIYGFVINHMGSAFDSSVSISSRN 708
>Os09g0516700 Protein of unknown function DUF936, plant family protein
Length = 463
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 6/125 (4%)
Query: 1 MATVTPGVLLKLLQAMHTDDRVAGDHRSPVLQVTAVVPALTASTADSLWPSNGFLLQLSD 60
MA++ PGVL+KLLQ M+TD +VAG+HRS +LQV ++VPAL S L+ + GF L++SD
Sbjct: 1 MASLVPGVLVKLLQHMNTDVKVAGEHRSSLLQVVSIVPALAGS---DLFTNQGFYLKVSD 57
Query: 61 GLHSTYVQPSSADADALVSARPQLVGHLVHLDRLRFARPVPRAVGIXXXXXXXXXXFVGN 120
H+TYV D ++S + QL G +H+DRL A PVP G+ VGN
Sbjct: 58 SSHATYVSLPEDQHDLILSDKIQL-GQFIHVDRLEAATPVPILRGV--RPVPGRHACVGN 114
Query: 121 PEPLV 125
PE LV
Sbjct: 115 PEDLV 119
>Os03g0181800 Protein of unknown function DUF936, plant family protein
Length = 573
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 84/125 (67%), Gaps = 6/125 (4%)
Query: 1 MATVTPGVLLKLLQAMHTDDRVAGDHRSPVLQVTAVVPALTASTADSLWPSNGFLLQLSD 60
MA++TPGVLLK+L+ +++D +V G++RS +LQV ++VPA+T S LWP +GF +++SD
Sbjct: 1 MASLTPGVLLKVLKNINSDVKVCGEYRSILLQVISIVPAITGS---ELWPDHGFFIKVSD 57
Query: 61 GLHSTYVQPSSADADALVSARPQLVGHLVHLDRLRFARPVPRAVGIXXXXXXXXXXFVGN 120
HSTYV S D + ++S + QL G +++++++ + PVP VG+ +GN
Sbjct: 58 SSHSTYVSLSKEDNELILSNKLQL-GQFIYVEKVQSSIPVPVLVGV--RPVPGRNPCIGN 114
Query: 121 PEPLV 125
P+ L+
Sbjct: 115 PKDLM 119
>Os08g0541500 Protein of unknown function DUF936, plant family protein
Length = 733
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 77/125 (61%), Gaps = 6/125 (4%)
Query: 1 MATVTPGVLLKLLQAMHTDDRVAGDHRSPVLQVTAVVPALTASTADSLWPSNGFLLQLSD 60
MA++ PGVLLKLLQ M++D +VAG+HRS +LQV ++VPAL S L+ + GF L++SD
Sbjct: 1 MASLVPGVLLKLLQHMNSDVKVAGEHRSSLLQVVSIVPALAGS---DLFTNQGFYLKVSD 57
Query: 61 GLHSTYVQPSSADADALVSARPQLVGHLVHLDRLRFARPVPRAVGIXXXXXXXXXXFVGN 120
H+TYV D ++S QL G +H+DRL A PVP G+ VG+
Sbjct: 58 SSHATYVSLPEEQHDLILSDTIQL-GQFIHVDRLEAATPVPILRGV--RPVPGRHACVGS 114
Query: 121 PEPLV 125
PE LV
Sbjct: 115 PEDLV 119
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 132/359 (36%), Gaps = 96/359 (26%)
Query: 412 KIMLHDPKWTDGSIPLDGVSDVLSKMGKEXXXXXXXXXXXXXXXXXXXXXXESVIRNLSK 471
KI + K TD S + L+K+GKE E+++R LS
Sbjct: 380 KIASNSKKLTDASASWTSLPPSLAKLGKELLKYRDAAQMAAVEAMQEASAAENLLRCLSS 439
Query: 472 FSELTSASKTSNPLPTVDIFLAVYEDTLKWKKIAESI--------------STNRTETAS 517
++E++S ++ NP P V+ FLA++ + + +S+ ST A
Sbjct: 440 YAEVSSTAEEQNPQPAVEQFLALHAAMSRATVVTDSLTKATATSTATSPDRSTPSEAAAV 499
Query: 518 WENS----------ATHWVEAALATDLEVLKLMNKAPESLSRKRGADKPKAPSVVEAPRT 567
E S A WV A LATDL L N P P++ +P
Sbjct: 500 DEESLAVAVERRRRAASWVGAGLATDLSAFSLYNLKP-------------PPAIAASPLA 546
Query: 568 TI----SKRQSHGTSAK--VQSKVLP----------------TSTASCAWNKTQGVNETA 605
+ S R + T A +S++ P W + G E
Sbjct: 547 VVLVDESARPAAATKASPPAKSRLFPPKVKGRVGPVAAAVAAAPVPPPEWERGGGAEERG 606
Query: 606 ELATTLCREMHTWFLKFVDEAMDLGFHLFE---DQNVASRGKQSSHITMVLSQFKKISDW 662
ELA L E WFL FV+ +D D++ A+R +L Q K+++DW
Sbjct: 607 ELARRLGEEARGWFLAFVERFLDADVAAAAAPWDRDRAAR---------MLPQLKRVNDW 657
Query: 663 LDGVGK-----------IAEEA--------------TTKDKVEQLKCKIYGFVINHMGS 696
L + K EEA ++ +E+L+ KIY +++ ++ S
Sbjct: 658 LSEIAKPTEPPPPQSDADGEEAGGGAPAVANGGGNTVPEETIERLRKKIYEYLLTNVDS 716
>Os04g0468700
Length = 130
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 48/63 (76%)
Query: 68 QPSSADADALVSARPQLVGHLVHLDRLRFARPVPRAVGIXXXXXXXXXXFVGNPEPLVAR 127
QPSSA+AD LVSA PQLVGHLV LDRL FARPVPRAVGI FVG+PEPL+AR
Sbjct: 14 QPSSANADTLVSACPQLVGHLVRLDRLHFARPVPRAVGIRPVPSSHSVSFVGDPEPLIAR 73
Query: 128 PAA 130
P A
Sbjct: 74 PTA 76
>Os01g0108800 Protein of unknown function DUF936, plant family protein
Length = 231
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 73/137 (53%), Gaps = 7/137 (5%)
Query: 1 MATVTPGVLLKLLQAMHTDD-RVAGDHRSPVLQVTAVVPALTASTADSLWPSNG-FLLQL 58
M+T++ GVLLKLL M + G+HR+ +LQVT +VPA L P +G F +++
Sbjct: 1 MSTLSAGVLLKLLDGMKAGAAKPVGEHRTALLQVTDIVPADLDDK--DLLPRHGKFYVKV 58
Query: 59 SDGLHSTYVQPSSADADALVSARPQLVGHLVHLDRLRFARPVPRAVGIXXXXXXXXXXFV 118
SD HS Y AD ++S + QL G VHLDRL PVP VG V
Sbjct: 59 SDSSHSIYATLPLPQADLVLSNKLQL-GQFVHLDRLDPGSPVPVIVG-ARPLPGRHPLVV 116
Query: 119 GNPEPLV-ARPAACSRG 134
G P+P A+PAA RG
Sbjct: 117 GTPDPATRAKPAAPRRG 133
>Os07g0588300 Protein of unknown function DUF936, plant family protein
Length = 640
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 102/271 (37%), Gaps = 45/271 (16%)
Query: 419 KWTDGSIPLDGVSDVLSKMGKEXXXXXXXXXXXXXXXXXXXXXXESVIRNLSKFSELTSA 478
KW + ++ +S L K GKE E +I+ LS +SEL S
Sbjct: 338 KWCESNVMWSTLSSSLLKHGKEAVKQRDMALQAVLDGLLEASTTEKLIKCLSTYSELQS- 396
Query: 479 SKTSNPLPTVDIFLAVYEDTLKWKKIAES---------ISTNRTETAS----------WE 519
K NP +D FL ++ IA+S +N T +AS +
Sbjct: 397 DKEENPKELIDRFLKFSQELDHAIFIAQSQTKIRHVKACGSNSTSSASTKAALKAALDRK 456
Query: 520 NSATHWVEAALATDLEVLKLMNKAPESLSRKRGADKPKAP-SVVEAPRTTISKRQSHGTS 578
SA W+ A+ DL + ES KP P P+ SKR S S
Sbjct: 457 QSAILWIREAIEADLSPFSSHTRPTESPKLSLAESKPMTPLFCCSKPKCNCSKRSSRKAS 516
Query: 579 AKVQSKVLPTSTASCAWNKTQGVNETA--ELATTLCREMHTWFLKFVDEAMDLGFHLFED 636
+QG N +A +LA L E + WFLK++D+ +D +
Sbjct: 517 D----------------GSSQGSNMSAAMDLAVALRSECNCWFLKYIDKFLD------DI 554
Query: 637 QNVASRGKQSSHITMVLSQFKKISDWLDGVG 667
++ S + +L Q K++ DWL+ V
Sbjct: 555 ESETMYAPCDSQVAGLLQQLKRVDDWLNRVA 585
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.312 0.125 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,595,008
Number of extensions: 877571
Number of successful extensions: 4765
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 4742
Number of HSP's successfully gapped: 9
Length of query: 708
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 600
Effective length of database: 11,396,689
Effective search space: 6838013400
Effective search space used: 6838013400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 160 (66.2 bits)