Os03g0181800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF936, plant family protein.
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Os03g0181800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF936, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.34 | 0.33 | 11.6 | -0.353 | 2.18 | 1 | -0.0508 | -0.055 | -0.526 | 5.51 | 30.72 | 409 | -- | -- |
| 49.34 | 0.327 | 11.6 | -0.362 | 2.18 | 1 | -0.06 | -- | -0.527 | 5.51 | 30.69 | 409 | -- | -- |
| 49.35 | 0.327 | 11.6 | -0.348 | 2.18 | 1 | -- | -0.0896 | -0.525 | 5.51 | 30.73 | 409 | -- | -- |
| 49.35 | 0.327 | 11.6 | -0.364 | 2.18 | 0.999 | -- | -- | -0.528 | 5.51 | 30.65 | 412 | -- | -- |
| 226.67 | 0.701 | 11.6 | -0.0715 | -- | 3.18 | -- | 0.708 | -0.263 | -- | 36.85 | 329 | -- | -- |
| 61.86 | 0.369 | 11.6 | -0.607 | 2.46 | -- | 0.0792 | -- | -0.715 | 5.55 | -- | -- | -- | -- |
| 61.87 | 0.368 | 11.6 | -0.607 | 2.46 | -- | -- | -- | -0.716 | 5.55 | -- | -- | -- | -- |
| 225.95 | 0.7 | 11.6 | 0.136 | -- | 3.18 | -- | -- | -0.217 | -- | 34.2 | 335 | -- | -- |
| 52.43 | 0.337 | 11.6 | -- | 2.15 | 1.15 | -- | -- | -0.46 | 5.45 | 30.5 | 454 | -- | -- |
| 377.5 | 0.908 | 11.7 | -0.526 | -- | -- | -- | -- | -0.656 | -- | -- | -- | -- | -- |
| 71.57 | 0.396 | 11.6 | -- | 2.45 | -- | -- | -- | -0.648 | 5.56 | -- | -- | -- | -- |
| 226.39 | 0.701 | 11.6 | -- | -- | 3.12 | -- | -- | -0.233 | -- | 34.11 | 335 | -- | -- |
| 384.8 | 0.916 | 11.7 | -- | -- | -- | -- | -- | -0.598 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.84 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 7 |
| 9 | 44.95 | temperature | 30 | 270 | < th | dose dependent | sin | 19 | NA |
| 10 | 44.98 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 14 |
| 22 | 45.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 15 |
| 75 | 46.91 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 127 | 47.58 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 141 | 47.66 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 20 |
| 142 | 47.70 | temperature | 10 | 270 | > th | dose dependent | sin | 18 | NA |
| 150 | 47.81 | temperature | 10 | 90 | > th | dose dependent | sin | 16 | NA |
| 172 | 47.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 198 | 48.09 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 5 |
| 206 | 48.11 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 281 | 48.27 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 15 |
| 318 | 48.34 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 322 | 48.35 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 4 |
| 376 | 48.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 440 | 48.54 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 455 | 48.56 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 558 | 48.71 | temperature | 15 | 10 | > th | dose dependent | rect. | 14 | 15 |
| 603 | 48.78 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 659 | 48.86 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 712 | 48.91 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 8 |
| 771 | 49.00 | temperature | 25 | 270 | < th | dose independent | rect. | 16 | 6 |
| 853 | 49.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 18 |