Os07g0588300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF936, plant family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0588300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF936, plant family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141 | 0.558 | 1.47 | 3.44 | 0.124 | -38.9 | 0.659 | 98 | 0.0391 | 5.97 | 44.72 | 4099 | -- | -- |
| 150.96 | 0.577 | 2.82 | 0.29 | 0.15 | -0.232 | 0.922 | -- | 0.0288 | 5.94 | 44.72 | 4099 | -- | -- |
| 141.16 | 0.553 | 1.51 | 3.4 | 0.159 | -39.1 | -- | 98.5 | 0.0359 | 4.15 | 44.1 | 4099 | -- | -- |
| 148.04 | 0.567 | 2.81 | 0.2 | 0.183 | 0.565 | -- | -- | 0.0961 | 5.05 | 35.16 | 4152 | -- | -- |
| 142.31 | 0.556 | 1.51 | 3.38 | -- | -39.4 | -- | 99.1 | 0.0439 | -- | 44 | 4099 | -- | -- |
| 151.11 | 0.576 | 2.82 | 0.282 | 0.153 | -- | 0.914 | -- | 0.0297 | 5.8 | -- | -- | -- | -- |
| 152.85 | 0.579 | 2.82 | 0.286 | 0.172 | -- | -- | -- | 0.0251 | 4.22 | -- | -- | -- | -- |
| 149.21 | 0.569 | 2.81 | 0.167 | -- | 0.639 | -- | -- | 0.0519 | -- | 38 | 4055 | -- | -- |
| 148.51 | 0.568 | 2.81 | -- | 0.204 | 0.711 | -- | -- | 0.0796 | 4.47 | 36 | 4038 | -- | -- |
| 154.46 | 0.581 | 2.82 | 0.293 | -- | -- | -- | -- | 0.0297 | -- | -- | -- | -- | -- |
| 155.01 | 0.582 | 2.83 | -- | 0.178 | -- | -- | -- | -0.00671 | 4.19 | -- | -- | -- | -- |
| 149.86 | 0.57 | 2.82 | -- | -- | 0.723 | -- | -- | 0.0499 | -- | 35 | 4054 | -- | -- |
| 156.72 | 0.584 | 2.83 | -- | -- | -- | -- | -- | -0.00277 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 129.09 | wind | 3.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 130.40 | wind | 5.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 5 | 134.86 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 15 | 134.86 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 33 | 136.91 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 35 | 138.65 | wind | 5.0 | 90 | > th | dose dependent | rect. | 2 | 4 |
| 39 | 138.79 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 20 | 1 |
| 40 | 138.79 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 21 | 1 |
| 59 | 138.79 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 60 | 138.79 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 21 | 1 |
| 91 | 139.04 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 21 | 2 |
| 92 | 139.04 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 94 | 139.20 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 2 |
| 102 | 139.74 | wind | 5.0 | 720 | > th | dose independent | rect. | 22 | 10 |
| 103 | 139.76 | wind | 1.0 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 106 | 139.77 | wind | 5.0 | 720 | > th | dose independent | rect. | 22 | 7 |
| 108 | 139.77 | wind | 3.0 | 720 | > th | dose dependent | rect. | 22 | 5 |
| 122 | 140.04 | wind | 5.0 | 720 | < th | dose independent | rect. | 22 | 8 |
| 124 | 140.07 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 21 | 5 |
| 125 | 140.07 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 21 | 5 |
| 142 | 140.37 | wind | 5.0 | 720 | > th | dose dependent | rect. | 21 | 11 |
| 148 | 140.42 | wind | 5.0 | 720 | > th | dose independent | rect. | 22 | 3 |
| 301 | 141.46 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 317 | 141.46 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 366 | 141.80 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 400 | 142.08 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 18 | 7 |
| 420 | 142.16 | wind | 7.0 | 720 | > th | dose dependent | rect. | 20 | 2 |
| 432 | 142.18 | wind | 7.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 577 | 142.78 | wind | 1.0 | 90 | < th | dose independent | rect. | 21 | 1 |
| 603 | 142.92 | temperature | 20.0 | 30 | < th | dose independent | rect. | 3 | 1 |
| 736 | 143.45 | wind | 3.0 | 720 | < th | dose independent | rect. | 23 | 4 |
| 739 | 143.46 | wind | 9.0 | 720 | < th | dose dependent | rect. | 23 | 7 |
| 741 | 143.47 | wind | 5.0 | 720 | < th | dose independent | sin | 10 | NA |
| 744 | 143.49 | wind | 5.0 | 720 | > th | dose independent | sin | 10 | NA |
| 766 | 143.57 | wind | 3.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 841 | 143.96 | radiation | 20.0 | 30 | > th | dose independent | rect. | 16 | 17 |
| 848 | 143.97 | radiation | 20.0 | 30 | > th | dose independent | rect. | 7 | 2 |
| 881 | 144.00 | radiation | 20.0 | 30 | < th | dose independent | sin | 11 | NA |
| 885 | 144.02 | radiation | 20.0 | 30 | > th | dose independent | sin | 11 | NA |
| 907 | 144.16 | wind | 9.0 | 720 | < th | dose dependent | rect. | 19 | 11 |
| 931 | 144.33 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 953 | 144.40 | wind | 3.0 | 720 | < th | dose independent | rect. | 1 | 2 |