BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0588300 Os07g0588300|Os07g0588300
(640 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0588300 Protein of unknown function DUF936, plant fami... 1018 0.0
Os03g0181800 Protein of unknown function DUF936, plant fami... 92 9e-19
Os09g0516700 Protein of unknown function DUF936, plant fami... 91 2e-18
Os08g0541500 Protein of unknown function DUF936, plant fami... 90 4e-18
Os12g0120000 Protein of unknown function DUF936, plant fami... 78 2e-14
Os11g0120200 Protein of unknown function DUF936, plant fami... 77 4e-14
Os01g0108800 Protein of unknown function DUF936, plant fami... 72 1e-12
>Os07g0588300 Protein of unknown function DUF936, plant family protein
Length = 640
Score = 1018 bits (2632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/622 (82%), Positives = 512/622 (82%)
Query: 19 HRPALRPGSLQRLLRXXXXXXXXXXXXXXXRSSRGGGRVLLQVTNITPALSGANPFSGHH 78
HRPALRPGSLQRLLR RSSRGGGRVLLQVTNITPALSGANPFSGHH
Sbjct: 19 HRPALRPGSLQRLLRPPDPSDDDGAAPTAPRSSRGGGRVLLQVTNITPALSGANPFSGHH 78
Query: 79 GFYLRLSDSARSCYVSLHADHDDLILTNGLHIGQVIEVEHLVPSVPAPVLRHFRVLPGRY 138
GFYLRLSDSARSCYVSLHADHDDLILTNGLHIGQVIEVEHLVPSVPAPVLRHFRVLPGRY
Sbjct: 79 GFYLRLSDSARSCYVSLHADHDDLILTNGLHIGQVIEVEHLVPSVPAPVLRHFRVLPGRY 138
Query: 139 PCIQQEPXXXXXXXXXXXEIKEVVXXXXXXXXXXXXXXGERRARQAXXXXXXXXXXXXXX 198
PCIQQEP EIKEVV GERRARQA
Sbjct: 139 PCIQQEPADDAAAGGAAAEIKEVVSERPRRSSPTPPIPGERRARQAGGGGSPSSISYRHR 198
Query: 199 XXXXXNLSEXXXXXXXXXXXVLGKLRKXXXXXXXXXXXXXXXXXXXXXXXXXARRNWDFT 258
NLSE VLGKLRK ARRNWDFT
Sbjct: 199 SRSISNLSEAGAAARRSGAAVLGKLRKVSVTSIDGTSTDDDDEESDVSSLSSARRNWDFT 258
Query: 259 GGVKDRRPVAPRRRGNSVSPSKSGPNSTITQNDDPMESVRRKAEKAFNVLSKRASAKMTR 318
GGVKDRRPVAPRRRGNSVSPSKSGPNSTITQNDDPMESVRRKAEKAFNVLSKRASAKMTR
Sbjct: 259 GGVKDRRPVAPRRRGNSVSPSKSGPNSTITQNDDPMESVRRKAEKAFNVLSKRASAKMTR 318
Query: 319 ESSNCTVATPQSAAASSSIKWCESNVMWSTLSSSLLKHGKEAVKQRDMALQAVLDGLLEA 378
ESSNCTVATPQSAAASSSIKWCESNVMWSTLSSSLLKHGKEAVKQRDMALQAVLDGLLEA
Sbjct: 319 ESSNCTVATPQSAAASSSIKWCESNVMWSTLSSSLLKHGKEAVKQRDMALQAVLDGLLEA 378
Query: 379 STTEKLIKCLSTYSELQSDKEENPKELIDRFLKFSQELDHAIFIAQSQTKIRHVKACGSN 438
STTEKLIKCLSTYSELQSDKEENPKELIDRFLKFSQELDHAIFIAQSQTKIRHVKACGSN
Sbjct: 379 STTEKLIKCLSTYSELQSDKEENPKELIDRFLKFSQELDHAIFIAQSQTKIRHVKACGSN 438
Query: 439 XXXXXXXXXXXXXXXDRKQSAILWIREAIEADLSPFSSHTRPTESPKLSLAESKPMTPLF 498
DRKQSAILWIREAIEADLSPFSSHTRPTESPKLSLAESKPMTPLF
Sbjct: 439 STSSASTKAALKAALDRKQSAILWIREAIEADLSPFSSHTRPTESPKLSLAESKPMTPLF 498
Query: 499 CCSKPKCNCSKRSSRKASDGSSQGSNMSAAMDLAVALRSECNCWFLKYIDKFLDDIESET 558
CCSKPKCNCSKRSSRKASDGSSQGSNMSAAMDLAVALRSECNCWFLKYIDKFLDDIESET
Sbjct: 499 CCSKPKCNCSKRSSRKASDGSSQGSNMSAAMDLAVALRSECNCWFLKYIDKFLDDIESET 558
Query: 559 MYAPCDSQVAGLLQQLKRVDDWLNRVALHERMLSVDRTNKDIMFSEEEESDACERRRDVQ 618
MYAPCDSQVAGLLQQLKRVDDWLNRVALHERMLSVDRTNKDIMFSEEEESDACERRRDVQ
Sbjct: 559 MYAPCDSQVAGLLQQLKRVDDWLNRVALHERMLSVDRTNKDIMFSEEEESDACERRRDVQ 618
Query: 619 INIADVDSIVSDWCIHPRVIRA 640
INIADVDSIVSDWCIHPRVIRA
Sbjct: 619 INIADVDSIVSDWCIHPRVIRA 640
>Os03g0181800 Protein of unknown function DUF936, plant family protein
Length = 573
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 57 VLLQVTNITPALSGANPFSGHHGFYLRLSDSARSCYVSLHADHDDLILTNGLHIGQVIEV 116
+LLQV +I PA++G+ + HGF++++SDS+ S YVSL + ++LIL+N L +GQ I V
Sbjct: 29 ILLQVISIVPAITGSELWP-DHGFFIKVSDSSHSTYVSLSKEDNELILSNKLQLGQFIYV 87
Query: 117 EHLVPSVPAPVLRHFRVLPGRYPCI 141
E + S+P PVL R +PGR PCI
Sbjct: 88 EKVQSSIPVPVLVGVRPVPGRNPCI 112
>Os09g0516700 Protein of unknown function DUF936, plant family protein
Length = 463
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 58 LLQVTNITPALSGANPFSGHHGFYLRLSDSARSCYVSLHADHDDLILTNGLHIGQVIEVE 117
LLQV +I PAL+G++ F+ + GFYL++SDS+ + YVSL D DLIL++ + +GQ I V+
Sbjct: 30 LLQVVSIVPALAGSDLFT-NQGFYLKVSDSSHATYVSLPEDQHDLILSDKIQLGQFIHVD 88
Query: 118 HLVPSVPAPVLRHFRVLPGRYPCI 141
L + P P+LR R +PGR+ C+
Sbjct: 89 RLEAATPVPILRGVRPVPGRHACV 112
>Os08g0541500 Protein of unknown function DUF936, plant family protein
Length = 733
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 58 LLQVTNITPALSGANPFSGHHGFYLRLSDSARSCYVSLHADHDDLILTNGLHIGQVIEVE 117
LLQV +I PAL+G++ F+ + GFYL++SDS+ + YVSL + DLIL++ + +GQ I V+
Sbjct: 30 LLQVVSIVPALAGSDLFT-NQGFYLKVSDSSHATYVSLPEEQHDLILSDTIQLGQFIHVD 88
Query: 118 HLVPSVPAPVLRHFRVLPGRYPCI 141
L + P P+LR R +PGR+ C+
Sbjct: 89 RLEAATPVPILRGVRPVPGRHACV 112
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 124/282 (43%), Gaps = 30/282 (10%)
Query: 333 ASSSIKWCESNVMWSTLSSSLLKHGKEAVKQRDMALQAVLDGLLEASTTEKLIKCLSTYS 392
AS+S K +++ W++L SL K GKE +K RD A A ++ + EAS E L++CLS+Y+
Sbjct: 382 ASNSKKLTDASASWTSLPPSLAKLGKELLKYRDAAQMAAVEAMQEASAAENLLRCLSSYA 441
Query: 393 ELQSDKEE-NPKELIDRFLKFSQELDHAIFIAQSQTKIRHVKAC-----GSNXXXXXXXX 446
E+ S EE NP+ +++FL + A + S TK +
Sbjct: 442 EVSSTAEEQNPQPAVEQFLALHAAMSRATVVTDSLTKATATSTATSPDRSTPSEAAAVDE 501
Query: 447 XXXXXXXDRKQSAILWIREAIEADLSPFSSH---------------------TRPTESPK 485
+R++ A W+ + DLS FS + RP + K
Sbjct: 502 ESLAVAVERRRRAASWVGAGLATDLSAFSLYNLKPPPAIAASPLAVVLVDESARPAAATK 561
Query: 486 LS-LAESKPMTPLFCCSKPKCNCSKRSSRKASDGSSQGSNMSAAMDLAVALRSECNCWFL 544
S A+S+ P + ++ +G +LA L E WFL
Sbjct: 562 ASPPAKSRLFPPKVKGRVGPVAAAVAAAPVPPPEWERGGGAEERGELARRLGEEARGWFL 621
Query: 545 KYIDKFLDDIESETMYAPCD-SQVAGLLQQLKRVDDWLNRVA 585
++++FL D + AP D + A +L QLKRV+DWL+ +A
Sbjct: 622 AFVERFL-DADVAAAAAPWDRDRAARMLPQLKRVNDWLSEIA 662
>Os12g0120000 Protein of unknown function DUF936, plant family protein
Length = 708
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 111/271 (40%), Gaps = 45/271 (16%)
Query: 338 KWCESNVMWSTLSSSLLKHGKEAVKQRDMALQAVLDGLLEASTTEKLIKCLSTYSELQS- 396
KW + ++ +S L K GKEA ++RD A A D L EA TE +I+ LS +SEL S
Sbjct: 419 KWTDGSIPLDGVSDVLSKMGKEATERRDAAAIAAADALQEALITESVIRNLSKFSELTSA 478
Query: 397 DKEENPKELIDRFLKFSQELDHAIFIAQSQTKIRHVKACGSNXXXXXXXXXXXXXXXDRK 456
K NP +D FL ++ IA+S + R A N
Sbjct: 479 SKTSNPLPTVDIFLAVYEDTLKWKKIAESISTNRTETASWEN------------------ 520
Query: 457 QSAILWIREAIEADLSPFSSHTRPTESPKLSLAESKPMTPLFCCSKPKCNCSKRSSRKAS 516
S W+ A+ DL + ES KP PL P+ SKR S S
Sbjct: 521 -SVTHWVEAALATDLEVLKLMNKAPESLSRKRGADKPKAPL-VVEAPRTTISKRQSHGTS 578
Query: 517 D----------------GSSQGSNMSAAMDLAVALRSECNCWFLKYIDKFLD------DI 554
+QG N +A +LA L E + WFLK++D+ +D +
Sbjct: 579 AKVQSKVLPTSSASCAWNKTQGVNETA--ELATTLCCEMHTWFLKFVDEAMDLGFHLFED 636
Query: 555 ESETMYAPCDSQVAGLLQQLKRVDDWLNRVA 585
++ S + +L Q K++ DWL+ V
Sbjct: 637 QNVASRGKQSSHITMVLSQFKKISDWLDGVG 667
>Os11g0120200 Protein of unknown function DUF936, plant family protein
Length = 708
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 111/271 (40%), Gaps = 45/271 (16%)
Query: 338 KWCESNVMWSTLSSSLLKHGKEAVKQRDMALQAVLDGLLEASTTEKLIKCLSTYSELQS- 396
KW + ++ +S L K GKEA ++RD A A D L EA TE +I+ LS +SEL S
Sbjct: 419 KWTDGSIPLDGVSDVLSKMGKEATERRDAAAIAAADALQEALITESVIRNLSKFSELTSA 478
Query: 397 DKEENPKELIDRFLKFSQELDHAIFIAQSQTKIRHVKACGSNXXXXXXXXXXXXXXXDRK 456
K NP +D FL ++ IA+S + R A N
Sbjct: 479 SKTSNPLPTVDIFLAVYEDTLKWKKIAESISTNRTETASWEN------------------ 520
Query: 457 QSAILWIREAIEADLSPFSSHTRPTESPKLSLAESKPMTPLFCCSKPKCNCSKRSSRKAS 516
SA W+ A+ DL + ES KP P P+ SKR S S
Sbjct: 521 -SATHWVEAALATDLEVLKLMNKAPESLSRKRGADKPKAP-SVVEAPRTTISKRQSHGTS 578
Query: 517 D----------------GSSQGSNMSAAMDLAVALRSECNCWFLKYIDKFLD------DI 554
+QG N +A +LA L E + WFLK++D+ +D +
Sbjct: 579 AKVQSKVLPTSTASCAWNKTQGVNETA--ELATTLCREMHTWFLKFVDEAMDLGFHLFED 636
Query: 555 ESETMYAPCDSQVAGLLQQLKRVDDWLNRVA 585
++ S + +L Q K++ DWL+ V
Sbjct: 637 QNVASRGKQSSHITMVLSQFKKISDWLDGVG 667
>Os01g0108800 Protein of unknown function DUF936, plant family protein
Length = 231
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 58 LLQVTNITPA-LSGANPFSGHHGFYLRLSDSARSCYVSLHADHDDLILTNGLHIGQVIEV 116
LLQVT+I PA L + H FY+++SDS+ S Y +L DL+L+N L +GQ + +
Sbjct: 31 LLQVTDIVPADLDDKDLLPRHGKFYVKVSDSSHSIYATLPLPQADLVLSNKLQLGQFVHL 90
Query: 117 EHLVPSVPAPVLRHFRVLPGRYPCIQQEP 145
+ L P P PV+ R LPGR+P + P
Sbjct: 91 DRLDPGSPVPVIVGARPLPGRHPLVVGTP 119
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.130 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,972,746
Number of extensions: 626245
Number of successful extensions: 2037
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 2026
Number of HSP's successfully gapped: 8
Length of query: 640
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 533
Effective length of database: 11,448,903
Effective search space: 6102265299
Effective search space used: 6102265299
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)